Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ4:026:0662
Extra
PDB:
ATOM 1 O3' U A 25 46.864 120.698 43.765 1.00 40.78 O
ATOM 2 P C A 26 47.584 120.551 42.337 1.00 40.56 P
ATOM 3 OP1 C A 26 48.555 119.436 42.407 1.00 38.26 O
ATOM 4 OP2 C A 26 48.038 121.894 41.919 1.00 40.27 O
ATOM 5 O5' C A 26 46.412 120.140 41.343 1.00 41.46 O
ATOM 6 C5' C A 26 45.738 118.888 41.460 1.00 38.31 C
ATOM 7 C4' C A 26 44.570 118.853 40.509 1.00 41.36 C
ATOM 8 O4' C A 26 43.686 119.966 40.814 1.00 41.55 O
ATOM 9 C3' C A 26 44.882 119.076 39.034 1.00 42.30 C
ATOM 10 O3' C A 26 45.343 117.918 38.365 1.00 43.68 O
ATOM 11 C2' C A 26 43.532 119.496 38.497 1.00 41.54 C
ATOM 12 O2' C A 26 42.658 118.395 38.416 1.00 42.00 O
ATOM 13 C1' C A 26 43.056 120.408 39.620 1.00 42.60 C
ATOM 14 N1 C A 26 43.433 121.807 39.361 1.00 44.41 N
ATOM 15 C2 C A 26 42.613 122.569 38.528 1.00 44.87 C
ATOM 16 O2 C A 26 41.618 122.042 38.019 1.00 46.85 O
ATOM 17 N3 C A 26 42.922 123.860 38.297 1.00 45.25 N
ATOM 18 C4 C A 26 43.999 124.399 38.862 1.00 43.30 C
ATOM 19 N4 C A 26 44.236 125.688 38.631 1.00 44.28 N
ATOM 20 C5 C A 26 44.871 123.643 39.695 1.00 43.61 C
ATOM 21 C6 C A 26 44.554 122.361 39.917 1.00 44.40 C
ATOM 22 P A A 27 46.397 118.074 37.164 1.00 47.12 P
ATOM 23 OP1 A A 27 46.907 116.711 36.857 1.00 46.11 O
ATOM 24 OP2 A A 27 47.353 119.157 37.506 1.00 46.87 O
ATOM 25 O5' A A 27 45.518 118.600 35.945 1.00 48.82 O
TER
ATOM 1 O3' U B 661 34.901 116.301 28.854 1.00 54.70 O
ATOM 2 P A B 662 35.159 116.894 30.329 1.00 52.23 P
ATOM 3 OP1 A B 662 33.890 117.367 30.951 1.00 52.04 O
ATOM 4 OP2 A B 662 36.314 117.822 30.225 1.00 53.83 O
ATOM 5 O5' A B 662 35.634 115.620 31.143 1.00 49.46 O
ATOM 6 C5' A B 662 36.545 114.682 30.568 1.00 47.31 C
ATOM 7 C4' A B 662 37.333 114.017 31.662 1.00 47.40 C
ATOM 8 O4' A B 662 38.211 115.001 32.272 1.00 49.79 O
ATOM 9 C3' A B 662 36.485 113.450 32.796 1.00 47.69 C
ATOM 10 O3' A B 662 37.144 112.314 33.316 1.00 46.65 O
ATOM 11 C2' A B 662 36.497 114.583 33.813 1.00 47.99 C
ATOM 12 O2' A B 662 36.301 114.170 35.145 1.00 51.79 O
ATOM 13 C1' A B 662 37.921 115.097 33.652 1.00 49.46 C
ATOM 14 N9 A B 662 38.108 116.480 34.093 1.00 48.25 N
ATOM 15 C8 A B 662 37.375 117.602 33.789 1.00 46.62 C
ATOM 16 N7 A B 662 37.794 118.685 34.393 1.00 45.66 N
ATOM 17 C5 A B 662 38.883 118.252 35.135 1.00 47.28 C
ATOM 18 C6 A B 662 39.765 118.918 36.005 1.00 46.18 C
ATOM 19 N6 A B 662 39.693 120.218 36.287 1.00 45.94 N
ATOM 20 N1 A B 662 40.738 118.189 36.586 1.00 46.90 N
ATOM 21 C2 A B 662 40.815 116.880 36.312 1.00 47.47 C
ATOM 22 N3 A B 662 40.049 116.141 35.518 1.00 49.10 N
ATOM 23 C4 A B 662 39.090 116.896 34.952 1.00 48.60 C
ATOM 24 P U B 663 36.665 110.850 32.875 1.00 46.83 P
ATOM 25 OP1 U B 663 37.578 109.876 33.541 1.00 45.55 O
ATOM 26 OP2 U B 663 36.532 110.833 31.400 1.00 47.26 O
ATOM 27 O5' U B 663 35.210 110.722 33.507 1.00 44.52 O
TER
ATOM 2 P C A 26 47.584 120.551 42.337 1.00 40.56 P
ATOM 3 OP1 C A 26 48.555 119.436 42.407 1.00 38.26 O
ATOM 4 OP2 C A 26 48.038 121.894 41.919 1.00 40.27 O
ATOM 5 O5' C A 26 46.412 120.140 41.343 1.00 41.46 O
ATOM 6 C5' C A 26 45.738 118.888 41.460 1.00 38.31 C
ATOM 7 C4' C A 26 44.570 118.853 40.509 1.00 41.36 C
ATOM 8 O4' C A 26 43.686 119.966 40.814 1.00 41.55 O
ATOM 9 C3' C A 26 44.882 119.076 39.034 1.00 42.30 C
ATOM 10 O3' C A 26 45.343 117.918 38.365 1.00 43.68 O
ATOM 11 C2' C A 26 43.532 119.496 38.497 1.00 41.54 C
ATOM 12 O2' C A 26 42.658 118.395 38.416 1.00 42.00 O
ATOM 13 C1' C A 26 43.056 120.408 39.620 1.00 42.60 C
ATOM 14 N1 C A 26 43.433 121.807 39.361 1.00 44.41 N
ATOM 15 C2 C A 26 42.613 122.569 38.528 1.00 44.87 C
ATOM 16 O2 C A 26 41.618 122.042 38.019 1.00 46.85 O
ATOM 17 N3 C A 26 42.922 123.860 38.297 1.00 45.25 N
ATOM 18 C4 C A 26 43.999 124.399 38.862 1.00 43.30 C
ATOM 19 N4 C A 26 44.236 125.688 38.631 1.00 44.28 N
ATOM 20 C5 C A 26 44.871 123.643 39.695 1.00 43.61 C
ATOM 21 C6 C A 26 44.554 122.361 39.917 1.00 44.40 C
ATOM 22 P A A 27 46.397 118.074 37.164 1.00 47.12 P
ATOM 23 OP1 A A 27 46.907 116.711 36.857 1.00 46.11 O
ATOM 24 OP2 A A 27 47.353 119.157 37.506 1.00 46.87 O
ATOM 25 O5' A A 27 45.518 118.600 35.945 1.00 48.82 O
TER
ATOM 1 O3' U B 661 34.901 116.301 28.854 1.00 54.70 O
ATOM 2 P A B 662 35.159 116.894 30.329 1.00 52.23 P
ATOM 3 OP1 A B 662 33.890 117.367 30.951 1.00 52.04 O
ATOM 4 OP2 A B 662 36.314 117.822 30.225 1.00 53.83 O
ATOM 5 O5' A B 662 35.634 115.620 31.143 1.00 49.46 O
ATOM 6 C5' A B 662 36.545 114.682 30.568 1.00 47.31 C
ATOM 7 C4' A B 662 37.333 114.017 31.662 1.00 47.40 C
ATOM 8 O4' A B 662 38.211 115.001 32.272 1.00 49.79 O
ATOM 9 C3' A B 662 36.485 113.450 32.796 1.00 47.69 C
ATOM 10 O3' A B 662 37.144 112.314 33.316 1.00 46.65 O
ATOM 11 C2' A B 662 36.497 114.583 33.813 1.00 47.99 C
ATOM 12 O2' A B 662 36.301 114.170 35.145 1.00 51.79 O
ATOM 13 C1' A B 662 37.921 115.097 33.652 1.00 49.46 C
ATOM 14 N9 A B 662 38.108 116.480 34.093 1.00 48.25 N
ATOM 15 C8 A B 662 37.375 117.602 33.789 1.00 46.62 C
ATOM 16 N7 A B 662 37.794 118.685 34.393 1.00 45.66 N
ATOM 17 C5 A B 662 38.883 118.252 35.135 1.00 47.28 C
ATOM 18 C6 A B 662 39.765 118.918 36.005 1.00 46.18 C
ATOM 19 N6 A B 662 39.693 120.218 36.287 1.00 45.94 N
ATOM 20 N1 A B 662 40.738 118.189 36.586 1.00 46.90 N
ATOM 21 C2 A B 662 40.815 116.880 36.312 1.00 47.47 C
ATOM 22 N3 A B 662 40.049 116.141 35.518 1.00 49.10 N
ATOM 23 C4 A B 662 39.090 116.896 34.952 1.00 48.60 C
ATOM 24 P U B 663 36.665 110.850 32.875 1.00 46.83 P
ATOM 25 OP1 U B 663 37.578 109.876 33.541 1.00 45.55 O
ATOM 26 OP2 U B 663 36.532 110.833 31.400 1.00 47.26 O
ATOM 27 O5' U B 663 35.210 110.722 33.507 1.00 44.52 O
TER
Atoms:
C2: (42.613,122.569,38.528)
OP1: (48.555,119.436,42.407)
OP2: (48.038,121.894,41.919)
C4: (43.999,124.399,38.862)
O5': (46.412,120.140,41.343)
C3': (44.882,119.076,39.034)
C1': (43.056,120.408,39.620)
O4': (43.686,119.966,40.814)
C5': (45.738,118.888,41.460)
P: (47.584,120.551,42.337)
O2: (41.618,122.042,38.019)
C4': (44.570,118.853,40.509)
C2': (43.532,119.496,38.497)
O2': (42.658,118.395,38.416)
N1: (43.433,121.807,39.361)
N3: (42.922,123.860,38.297)
N4: (44.236,125.688,38.631)
C6: (44.554,122.361,39.917)
C5: (44.871,123.643,39.695)
O3': (45.343,117.918,38.365)
OP1: (48.555,119.436,42.407)
OP2: (48.038,121.894,41.919)
C4: (43.999,124.399,38.862)
O5': (46.412,120.140,41.343)
C3': (44.882,119.076,39.034)
C1': (43.056,120.408,39.620)
O4': (43.686,119.966,40.814)
C5': (45.738,118.888,41.460)
P: (47.584,120.551,42.337)
O2: (41.618,122.042,38.019)
C4': (44.570,118.853,40.509)
C2': (43.532,119.496,38.497)
O2': (42.658,118.395,38.416)
N1: (43.433,121.807,39.361)
N3: (42.922,123.860,38.297)
N4: (44.236,125.688,38.631)
C6: (44.554,122.361,39.917)
C5: (44.871,123.643,39.695)
O3': (45.343,117.918,38.365)
OP1: (33.890,117.367,30.951)
OP2: (36.314,117.822,30.225)
C3': (36.485,113.450,32.796)
C1': (37.921,115.097,33.652)
C5': (36.545,114.682,30.568)
O4': (38.211,115.001,32.272)
C8: (37.375,117.602,33.789)
O2': (36.301,114.170,35.145)
C6: (39.765,118.918,36.005)
C5: (38.883,118.252,35.135)
C4: (39.090,116.896,34.952)
P: (35.159,116.894,30.329)
C4': (37.333,114.017,31.662)
C2': (36.497,114.583,33.813)
C2: (40.815,116.880,36.312)
N1: (40.738,118.189,36.586)
N3: (40.049,116.141,35.518)
N6: (39.693,120.218,36.287)
N7: (37.794,118.685,34.393)
N9: (38.108,116.480,34.093)
O5': (35.634,115.620,31.143)
O3': (37.144,112.314,33.316)
OP2: (36.314,117.822,30.225)
C3': (36.485,113.450,32.796)
C1': (37.921,115.097,33.652)
C5': (36.545,114.682,30.568)
O4': (38.211,115.001,32.272)
C8: (37.375,117.602,33.789)
O2': (36.301,114.170,35.145)
C6: (39.765,118.918,36.005)
C5: (38.883,118.252,35.135)
C4: (39.090,116.896,34.952)
P: (35.159,116.894,30.329)
C4': (37.333,114.017,31.662)
C2': (36.497,114.583,33.813)
C2: (40.815,116.880,36.312)
N1: (40.738,118.189,36.586)
N3: (40.049,116.141,35.518)
N6: (39.693,120.218,36.287)
N7: (37.794,118.685,34.393)
N9: (38.108,116.480,34.093)
O5': (35.634,115.620,31.143)
O3': (37.144,112.314,33.316)
Image (generated by PyMOL):