Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02405:02404
Extra
PDB:
ATOM 1 O3' U A2404 71.984 108.165 158.513 1.00 63.46 O
ATOM 2 P G A2405 72.758 108.345 159.909 1.00 63.94 P
ATOM 3 OP1 G A2405 72.178 107.354 160.844 1.00 62.93 O
ATOM 4 OP2 G A2405 72.766 109.783 160.281 1.00 62.92 O
ATOM 5 O5' G A2405 74.243 107.893 159.558 1.00 61.97 O
ATOM 6 C5' G A2405 75.372 108.668 159.986 1.00 64.22 C
ATOM 7 C4' G A2405 76.386 108.758 158.875 1.00 65.67 C
ATOM 8 O4' G A2405 76.838 107.429 158.522 1.00 66.67 O
ATOM 9 C3' G A2405 75.887 109.408 157.596 1.00 66.31 C
ATOM 10 O3' G A2405 76.259 110.789 157.634 1.00 68.28 O
ATOM 11 C2' G A2405 76.627 108.636 156.505 1.00 66.89 C
ATOM 12 O2' G A2405 77.936 109.120 156.289 1.00 66.92 O
ATOM 13 C1' G A2405 76.740 107.242 157.130 1.00 66.77 C
ATOM 14 N9 G A2405 75.660 106.285 156.913 1.00 67.99 N
ATOM 15 C8 G A2405 74.309 106.527 156.939 1.00 68.48 C
ATOM 16 N7 G A2405 73.592 105.440 156.835 1.00 69.68 N
ATOM 17 C5 G A2405 74.525 104.420 156.709 1.00 69.43 C
ATOM 18 C6 G A2405 74.344 103.009 156.587 1.00 69.86 C
ATOM 19 O6 G A2405 73.287 102.363 156.582 1.00 69.81 O
ATOM 20 N1 G A2405 75.562 102.345 156.476 1.00 70.02 N
ATOM 21 C2 G A2405 76.798 102.952 156.490 1.00 69.91 C
ATOM 22 N2 G A2405 77.861 102.138 156.374 1.00 68.68 N
ATOM 23 N3 G A2405 76.978 104.261 156.611 1.00 69.32 N
ATOM 24 C4 G A2405 75.807 104.928 156.720 1.00 68.82 C
ATOM 25 P C A2406 75.353 111.907 156.913 1.00 69.72 P
ATOM 26 OP1 C A2406 74.959 111.391 155.583 1.00 71.52 O
ATOM 27 OP2 C A2406 76.091 113.190 157.012 1.00 69.51 O
ATOM 28 O5' C A2406 74.047 112.031 157.818 1.00 69.90 O
TER
ATOM 1 O3' G B2403 65.830 108.429 157.856 1.00 58.83 O
ATOM 2 P U B2404 66.780 108.720 159.116 1.00 60.37 P
ATOM 3 OP1 U B2404 66.895 107.436 159.844 1.00 62.25 O
ATOM 4 OP2 U B2404 66.300 109.935 159.834 1.00 59.45 O
ATOM 5 O5' U B2404 68.196 109.036 158.462 1.00 60.06 O
ATOM 6 C5' U B2404 68.885 108.035 157.697 1.00 61.17 C
ATOM 7 C4' U B2404 70.120 108.622 157.060 1.00 61.95 C
ATOM 8 O4' U B2404 69.741 109.744 156.227 1.00 62.05 O
ATOM 9 C3' U B2404 71.140 109.206 158.021 1.00 62.35 C
ATOM 10 O3' U B2404 71.984 108.165 158.513 1.00 63.46 O
ATOM 11 C2' U B2404 71.900 110.196 157.141 1.00 61.09 C
ATOM 12 O2' U B2404 72.912 109.592 156.366 1.00 59.00 O
ATOM 13 C1' U B2404 70.797 110.685 156.198 1.00 60.89 C
ATOM 14 N1 U B2404 70.256 112.030 156.454 1.00 60.38 N
ATOM 15 C2 U B2404 70.892 113.100 155.842 1.00 60.04 C
ATOM 16 O2 U B2404 71.875 112.972 155.129 1.00 58.43 O
ATOM 17 N3 U B2404 70.333 114.328 156.092 1.00 59.80 N
ATOM 18 C4 U B2404 69.232 114.600 156.869 1.00 58.69 C
ATOM 19 O4 U B2404 68.817 115.759 156.940 1.00 58.03 O
ATOM 20 C5 U B2404 68.634 113.448 157.477 1.00 58.83 C
ATOM 21 C6 U B2404 69.154 112.234 157.257 1.00 59.30 C
ATOM 22 P G B2405 72.758 108.345 159.909 1.00 63.94 P
ATOM 23 OP1 G B2405 72.178 107.354 160.844 1.00 62.93 O
ATOM 24 OP2 G B2405 72.766 109.783 160.281 1.00 62.92 O
ATOM 25 O5' G B2405 74.243 107.893 159.558 1.00 61.97 O
TER
ATOM 2 P G A2405 72.758 108.345 159.909 1.00 63.94 P
ATOM 3 OP1 G A2405 72.178 107.354 160.844 1.00 62.93 O
ATOM 4 OP2 G A2405 72.766 109.783 160.281 1.00 62.92 O
ATOM 5 O5' G A2405 74.243 107.893 159.558 1.00 61.97 O
ATOM 6 C5' G A2405 75.372 108.668 159.986 1.00 64.22 C
ATOM 7 C4' G A2405 76.386 108.758 158.875 1.00 65.67 C
ATOM 8 O4' G A2405 76.838 107.429 158.522 1.00 66.67 O
ATOM 9 C3' G A2405 75.887 109.408 157.596 1.00 66.31 C
ATOM 10 O3' G A2405 76.259 110.789 157.634 1.00 68.28 O
ATOM 11 C2' G A2405 76.627 108.636 156.505 1.00 66.89 C
ATOM 12 O2' G A2405 77.936 109.120 156.289 1.00 66.92 O
ATOM 13 C1' G A2405 76.740 107.242 157.130 1.00 66.77 C
ATOM 14 N9 G A2405 75.660 106.285 156.913 1.00 67.99 N
ATOM 15 C8 G A2405 74.309 106.527 156.939 1.00 68.48 C
ATOM 16 N7 G A2405 73.592 105.440 156.835 1.00 69.68 N
ATOM 17 C5 G A2405 74.525 104.420 156.709 1.00 69.43 C
ATOM 18 C6 G A2405 74.344 103.009 156.587 1.00 69.86 C
ATOM 19 O6 G A2405 73.287 102.363 156.582 1.00 69.81 O
ATOM 20 N1 G A2405 75.562 102.345 156.476 1.00 70.02 N
ATOM 21 C2 G A2405 76.798 102.952 156.490 1.00 69.91 C
ATOM 22 N2 G A2405 77.861 102.138 156.374 1.00 68.68 N
ATOM 23 N3 G A2405 76.978 104.261 156.611 1.00 69.32 N
ATOM 24 C4 G A2405 75.807 104.928 156.720 1.00 68.82 C
ATOM 25 P C A2406 75.353 111.907 156.913 1.00 69.72 P
ATOM 26 OP1 C A2406 74.959 111.391 155.583 1.00 71.52 O
ATOM 27 OP2 C A2406 76.091 113.190 157.012 1.00 69.51 O
ATOM 28 O5' C A2406 74.047 112.031 157.818 1.00 69.90 O
TER
ATOM 1 O3' G B2403 65.830 108.429 157.856 1.00 58.83 O
ATOM 2 P U B2404 66.780 108.720 159.116 1.00 60.37 P
ATOM 3 OP1 U B2404 66.895 107.436 159.844 1.00 62.25 O
ATOM 4 OP2 U B2404 66.300 109.935 159.834 1.00 59.45 O
ATOM 5 O5' U B2404 68.196 109.036 158.462 1.00 60.06 O
ATOM 6 C5' U B2404 68.885 108.035 157.697 1.00 61.17 C
ATOM 7 C4' U B2404 70.120 108.622 157.060 1.00 61.95 C
ATOM 8 O4' U B2404 69.741 109.744 156.227 1.00 62.05 O
ATOM 9 C3' U B2404 71.140 109.206 158.021 1.00 62.35 C
ATOM 10 O3' U B2404 71.984 108.165 158.513 1.00 63.46 O
ATOM 11 C2' U B2404 71.900 110.196 157.141 1.00 61.09 C
ATOM 12 O2' U B2404 72.912 109.592 156.366 1.00 59.00 O
ATOM 13 C1' U B2404 70.797 110.685 156.198 1.00 60.89 C
ATOM 14 N1 U B2404 70.256 112.030 156.454 1.00 60.38 N
ATOM 15 C2 U B2404 70.892 113.100 155.842 1.00 60.04 C
ATOM 16 O2 U B2404 71.875 112.972 155.129 1.00 58.43 O
ATOM 17 N3 U B2404 70.333 114.328 156.092 1.00 59.80 N
ATOM 18 C4 U B2404 69.232 114.600 156.869 1.00 58.69 C
ATOM 19 O4 U B2404 68.817 115.759 156.940 1.00 58.03 O
ATOM 20 C5 U B2404 68.634 113.448 157.477 1.00 58.83 C
ATOM 21 C6 U B2404 69.154 112.234 157.257 1.00 59.30 C
ATOM 22 P G B2405 72.758 108.345 159.909 1.00 63.94 P
ATOM 23 OP1 G B2405 72.178 107.354 160.844 1.00 62.93 O
ATOM 24 OP2 G B2405 72.766 109.783 160.281 1.00 62.92 O
ATOM 25 O5' G B2405 74.243 107.893 159.558 1.00 61.97 O
TER
Atoms:
OP1: (72.178,107.354,160.844)
OP2: (72.766,109.783,160.281)
C3': (75.887,109.408,157.596)
C1': (76.740,107.242,157.130)
C5': (75.372,108.668,159.986)
O6: (73.287,102.363,156.582)
O4': (76.838,107.429,158.522)
C8: (74.309,106.527,156.939)
C2: (76.798,102.952,156.490)
C6: (74.344,103.009,156.587)
C5: (74.525,104.420,156.709)
C4: (75.807,104.928,156.720)
P: (72.758,108.345,159.909)
C4': (76.386,108.758,158.875)
C2': (76.627,108.636,156.505)
O2': (77.936,109.120,156.289)
N1: (75.562,102.345,156.476)
N2: (77.861,102.138,156.374)
N3: (76.978,104.261,156.611)
N7: (73.592,105.440,156.835)
N9: (75.660,106.285,156.913)
O5': (74.243,107.893,159.558)
O3': (76.259,110.789,157.634)
OP2: (72.766,109.783,160.281)
C3': (75.887,109.408,157.596)
C1': (76.740,107.242,157.130)
C5': (75.372,108.668,159.986)
O6: (73.287,102.363,156.582)
O4': (76.838,107.429,158.522)
C8: (74.309,106.527,156.939)
C2: (76.798,102.952,156.490)
C6: (74.344,103.009,156.587)
C5: (74.525,104.420,156.709)
C4: (75.807,104.928,156.720)
P: (72.758,108.345,159.909)
C4': (76.386,108.758,158.875)
C2': (76.627,108.636,156.505)
O2': (77.936,109.120,156.289)
N1: (75.562,102.345,156.476)
N2: (77.861,102.138,156.374)
N3: (76.978,104.261,156.611)
N7: (73.592,105.440,156.835)
N9: (75.660,106.285,156.913)
O5': (74.243,107.893,159.558)
O3': (76.259,110.789,157.634)
C4: (69.232,114.600,156.869)
N3: (70.333,114.328,156.092)
OP1: (66.895,107.436,159.844)
OP2: (66.300,109.935,159.834)
C2: (70.892,113.100,155.842)
C1': (70.797,110.685,156.198)
C3': (71.140,109.206,158.021)
O5': (68.196,109.036,158.462)
O4': (69.741,109.744,156.227)
C5': (68.885,108.035,157.697)
P: (66.780,108.720,159.116)
C4': (70.120,108.622,157.060)
C2': (71.900,110.196,157.141)
O2': (72.912,109.592,156.366)
N1: (70.256,112.030,156.454)
O4: (68.817,115.759,156.940)
O2: (71.875,112.972,155.129)
C6: (69.154,112.234,157.257)
C5: (68.634,113.448,157.477)
O3': (71.984,108.165,158.513)
N3: (70.333,114.328,156.092)
OP1: (66.895,107.436,159.844)
OP2: (66.300,109.935,159.834)
C2: (70.892,113.100,155.842)
C1': (70.797,110.685,156.198)
C3': (71.140,109.206,158.021)
O5': (68.196,109.036,158.462)
O4': (69.741,109.744,156.227)
C5': (68.885,108.035,157.697)
P: (66.780,108.720,159.116)
C4': (70.120,108.622,157.060)
C2': (71.900,110.196,157.141)
O2': (72.912,109.592,156.366)
N1: (70.256,112.030,156.454)
O4: (68.817,115.759,156.940)
O2: (71.875,112.972,155.129)
C6: (69.154,112.234,157.257)
C5: (68.634,113.448,157.477)
O3': (71.984,108.165,158.513)
Image (generated by PyMOL):