Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A984:A930
Extra
PDB:
ATOM 1 O3' G A 983 20.009 70.438 92.818 1.00 45.96 O
ATOM 2 P C A 984 19.121 71.036 91.610 1.00 46.13 P
ATOM 3 OP1 C A 984 18.047 71.812 92.278 1.00 43.00 O
ATOM 4 OP2 C A 984 18.760 69.947 90.667 1.00 44.34 O
ATOM 5 O5' C A 984 20.103 72.000 90.802 1.00 44.28 O
ATOM 6 C5' C A 984 20.594 73.243 91.339 1.00 44.41 C
ATOM 7 C4' C A 984 21.829 73.672 90.574 1.00 45.62 C
ATOM 8 O4' C A 984 22.820 72.613 90.653 1.00 45.96 O
ATOM 9 C3' C A 984 21.649 73.857 89.074 1.00 45.58 C
ATOM 10 O3' C A 984 21.056 75.104 88.747 1.00 46.02 O
ATOM 11 C2' C A 984 23.072 73.699 88.551 1.00 45.94 C
ATOM 12 O2' C A 984 23.925 74.811 88.714 1.00 47.08 O
ATOM 13 C1' C A 984 23.596 72.601 89.467 1.00 46.06 C
ATOM 14 N1 C A 984 23.501 71.286 88.837 1.00 47.20 N
ATOM 15 C2 C A 984 24.516 70.890 87.958 1.00 49.36 C
ATOM 16 O2 C A 984 25.441 71.673 87.718 1.00 51.36 O
ATOM 17 N3 C A 984 24.459 69.674 87.385 1.00 49.81 N
ATOM 18 C4 C A 984 23.430 68.863 87.649 1.00 49.02 C
ATOM 19 N4 C A 984 23.414 67.654 87.070 1.00 48.66 N
ATOM 20 C5 C A 984 22.372 69.250 88.525 1.00 48.91 C
ATOM 21 C6 C A 984 22.449 70.458 89.094 1.00 47.37 C
ATOM 22 P C A 985 20.191 75.242 87.403 1.00 46.31 P
ATOM 23 OP1 C A 985 19.685 76.638 87.351 1.00 45.08 O
ATOM 24 OP2 C A 985 19.230 74.119 87.364 1.00 46.71 O
ATOM 25 O5' C A 985 21.254 75.023 86.236 1.00 44.99 O
TER
ATOM 1 O3' U B 929 33.933 71.269 87.948 1.00 54.07 O
ATOM 2 P A B 930 35.258 72.059 88.441 1.00 53.92 P
ATOM 3 OP1 A B 930 35.723 72.916 87.326 1.00 52.07 O
ATOM 4 OP2 A B 930 36.211 71.140 89.118 1.00 51.92 O
ATOM 5 O5' A B 930 34.705 73.045 89.556 1.00 51.54 O
ATOM 6 C5' A B 930 35.502 74.127 90.040 1.00 48.82 C
ATOM 7 C4' A B 930 34.651 75.058 90.868 1.00 47.65 C
ATOM 8 O4' A B 930 33.583 75.613 90.053 1.00 47.03 O
ATOM 9 C3' A B 930 33.925 74.393 92.018 1.00 45.23 C
ATOM 10 O3' A B 930 34.747 74.211 93.141 1.00 42.36 O
ATOM 11 C2' A B 930 32.773 75.339 92.266 1.00 46.26 C
ATOM 12 O2' A B 930 33.156 76.462 93.025 1.00 46.92 O
ATOM 13 C1' A B 930 32.410 75.724 90.829 1.00 47.42 C
ATOM 14 N9 A B 930 31.421 74.800 90.279 1.00 49.35 N
ATOM 15 C8 A B 930 31.480 73.426 90.135 1.00 49.54 C
ATOM 16 N7 A B 930 30.380 72.897 89.664 1.00 48.87 N
ATOM 17 C5 A B 930 29.548 73.993 89.474 1.00 51.15 C
ATOM 18 C6 A B 930 28.226 74.110 89.022 1.00 53.05 C
ATOM 19 N6 A B 930 27.475 73.070 88.686 1.00 53.94 N
ATOM 20 N1 A B 930 27.690 75.352 88.942 1.00 54.48 N
ATOM 21 C2 A B 930 28.441 76.398 89.310 1.00 54.59 C
ATOM 22 N3 A B 930 29.688 76.416 89.768 1.00 52.58 N
ATOM 23 C4 A B 930 30.186 75.168 89.829 1.00 51.02 C
ATOM 24 P G B 931 34.617 72.862 93.964 1.00 41.66 P
ATOM 25 OP1 G B 931 35.609 72.837 95.075 1.00 39.64 O
ATOM 26 OP2 G B 931 34.637 71.807 92.940 1.00 43.20 O
ATOM 27 O5' G B 931 33.135 72.924 94.527 1.00 40.68 O
TER
ATOM 2 P C A 984 19.121 71.036 91.610 1.00 46.13 P
ATOM 3 OP1 C A 984 18.047 71.812 92.278 1.00 43.00 O
ATOM 4 OP2 C A 984 18.760 69.947 90.667 1.00 44.34 O
ATOM 5 O5' C A 984 20.103 72.000 90.802 1.00 44.28 O
ATOM 6 C5' C A 984 20.594 73.243 91.339 1.00 44.41 C
ATOM 7 C4' C A 984 21.829 73.672 90.574 1.00 45.62 C
ATOM 8 O4' C A 984 22.820 72.613 90.653 1.00 45.96 O
ATOM 9 C3' C A 984 21.649 73.857 89.074 1.00 45.58 C
ATOM 10 O3' C A 984 21.056 75.104 88.747 1.00 46.02 O
ATOM 11 C2' C A 984 23.072 73.699 88.551 1.00 45.94 C
ATOM 12 O2' C A 984 23.925 74.811 88.714 1.00 47.08 O
ATOM 13 C1' C A 984 23.596 72.601 89.467 1.00 46.06 C
ATOM 14 N1 C A 984 23.501 71.286 88.837 1.00 47.20 N
ATOM 15 C2 C A 984 24.516 70.890 87.958 1.00 49.36 C
ATOM 16 O2 C A 984 25.441 71.673 87.718 1.00 51.36 O
ATOM 17 N3 C A 984 24.459 69.674 87.385 1.00 49.81 N
ATOM 18 C4 C A 984 23.430 68.863 87.649 1.00 49.02 C
ATOM 19 N4 C A 984 23.414 67.654 87.070 1.00 48.66 N
ATOM 20 C5 C A 984 22.372 69.250 88.525 1.00 48.91 C
ATOM 21 C6 C A 984 22.449 70.458 89.094 1.00 47.37 C
ATOM 22 P C A 985 20.191 75.242 87.403 1.00 46.31 P
ATOM 23 OP1 C A 985 19.685 76.638 87.351 1.00 45.08 O
ATOM 24 OP2 C A 985 19.230 74.119 87.364 1.00 46.71 O
ATOM 25 O5' C A 985 21.254 75.023 86.236 1.00 44.99 O
TER
ATOM 1 O3' U B 929 33.933 71.269 87.948 1.00 54.07 O
ATOM 2 P A B 930 35.258 72.059 88.441 1.00 53.92 P
ATOM 3 OP1 A B 930 35.723 72.916 87.326 1.00 52.07 O
ATOM 4 OP2 A B 930 36.211 71.140 89.118 1.00 51.92 O
ATOM 5 O5' A B 930 34.705 73.045 89.556 1.00 51.54 O
ATOM 6 C5' A B 930 35.502 74.127 90.040 1.00 48.82 C
ATOM 7 C4' A B 930 34.651 75.058 90.868 1.00 47.65 C
ATOM 8 O4' A B 930 33.583 75.613 90.053 1.00 47.03 O
ATOM 9 C3' A B 930 33.925 74.393 92.018 1.00 45.23 C
ATOM 10 O3' A B 930 34.747 74.211 93.141 1.00 42.36 O
ATOM 11 C2' A B 930 32.773 75.339 92.266 1.00 46.26 C
ATOM 12 O2' A B 930 33.156 76.462 93.025 1.00 46.92 O
ATOM 13 C1' A B 930 32.410 75.724 90.829 1.00 47.42 C
ATOM 14 N9 A B 930 31.421 74.800 90.279 1.00 49.35 N
ATOM 15 C8 A B 930 31.480 73.426 90.135 1.00 49.54 C
ATOM 16 N7 A B 930 30.380 72.897 89.664 1.00 48.87 N
ATOM 17 C5 A B 930 29.548 73.993 89.474 1.00 51.15 C
ATOM 18 C6 A B 930 28.226 74.110 89.022 1.00 53.05 C
ATOM 19 N6 A B 930 27.475 73.070 88.686 1.00 53.94 N
ATOM 20 N1 A B 930 27.690 75.352 88.942 1.00 54.48 N
ATOM 21 C2 A B 930 28.441 76.398 89.310 1.00 54.59 C
ATOM 22 N3 A B 930 29.688 76.416 89.768 1.00 52.58 N
ATOM 23 C4 A B 930 30.186 75.168 89.829 1.00 51.02 C
ATOM 24 P G B 931 34.617 72.862 93.964 1.00 41.66 P
ATOM 25 OP1 G B 931 35.609 72.837 95.075 1.00 39.64 O
ATOM 26 OP2 G B 931 34.637 71.807 92.940 1.00 43.20 O
ATOM 27 O5' G B 931 33.135 72.924 94.527 1.00 40.68 O
TER
Atoms:
C2: (24.516,70.890,87.958)
OP1: (18.047,71.812,92.278)
OP2: (18.760,69.947,90.667)
C4: (23.430,68.863,87.649)
O5': (20.103,72.000,90.802)
C3': (21.649,73.857,89.074)
C1': (23.596,72.601,89.467)
O4': (22.820,72.613,90.653)
C5': (20.594,73.243,91.339)
P: (19.121,71.036,91.610)
O2: (25.441,71.673,87.718)
C4': (21.829,73.672,90.574)
C2': (23.072,73.699,88.551)
O2': (23.925,74.811,88.714)
N1: (23.501,71.286,88.837)
N3: (24.459,69.674,87.385)
N4: (23.414,67.654,87.070)
C6: (22.449,70.458,89.094)
C5: (22.372,69.250,88.525)
O3': (21.056,75.104,88.747)
OP1: (18.047,71.812,92.278)
OP2: (18.760,69.947,90.667)
C4: (23.430,68.863,87.649)
O5': (20.103,72.000,90.802)
C3': (21.649,73.857,89.074)
C1': (23.596,72.601,89.467)
O4': (22.820,72.613,90.653)
C5': (20.594,73.243,91.339)
P: (19.121,71.036,91.610)
O2: (25.441,71.673,87.718)
C4': (21.829,73.672,90.574)
C2': (23.072,73.699,88.551)
O2': (23.925,74.811,88.714)
N1: (23.501,71.286,88.837)
N3: (24.459,69.674,87.385)
N4: (23.414,67.654,87.070)
C6: (22.449,70.458,89.094)
C5: (22.372,69.250,88.525)
O3': (21.056,75.104,88.747)
OP1: (35.723,72.916,87.326)
OP2: (36.211,71.140,89.118)
C3': (33.925,74.393,92.018)
C1': (32.410,75.724,90.829)
C5': (35.502,74.127,90.040)
O4': (33.583,75.613,90.053)
C8: (31.480,73.426,90.135)
O2': (33.156,76.462,93.025)
C6: (28.226,74.110,89.022)
C5: (29.548,73.993,89.474)
C4: (30.186,75.168,89.829)
P: (35.258,72.059,88.441)
C4': (34.651,75.058,90.868)
C2': (32.773,75.339,92.266)
C2: (28.441,76.398,89.310)
N1: (27.690,75.352,88.942)
N3: (29.688,76.416,89.768)
N6: (27.475,73.070,88.686)
N7: (30.380,72.897,89.664)
N9: (31.421,74.800,90.279)
O5': (34.705,73.045,89.556)
O3': (34.747,74.211,93.141)
OP2: (36.211,71.140,89.118)
C3': (33.925,74.393,92.018)
C1': (32.410,75.724,90.829)
C5': (35.502,74.127,90.040)
O4': (33.583,75.613,90.053)
C8: (31.480,73.426,90.135)
O2': (33.156,76.462,93.025)
C6: (28.226,74.110,89.022)
C5: (29.548,73.993,89.474)
C4: (30.186,75.168,89.829)
P: (35.258,72.059,88.441)
C4': (34.651,75.058,90.868)
C2': (32.773,75.339,92.266)
C2: (28.441,76.398,89.310)
N1: (27.690,75.352,88.942)
N3: (29.688,76.416,89.768)
N6: (27.475,73.070,88.686)
N7: (30.380,72.897,89.664)
N9: (31.421,74.800,90.279)
O5': (34.705,73.045,89.556)
O3': (34.747,74.211,93.141)
Image (generated by PyMOL):