Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:928:955
Extra
PDB:
ATOM 1 O3' U A 27 70.364 17.536 101.514 1.00 68.13 O
ATOM 2 P C A 28 71.719 17.284 100.696 1.00 66.69 P
ATOM 3 OP1 C A 28 72.197 18.607 100.243 1.00 66.57 O
ATOM 4 OP2 C A 28 71.487 16.213 99.696 1.00 66.83 O
ATOM 5 O5' C A 28 72.707 16.750 101.828 1.00 68.77 O
ATOM 6 C5' C A 28 72.931 17.528 103.023 1.00 69.92 C
ATOM 7 C4' C A 28 72.841 16.658 104.257 1.00 71.58 C
ATOM 8 O4' C A 28 71.581 15.929 104.251 1.00 71.72 O
ATOM 9 C3' C A 28 73.889 15.565 104.396 1.00 72.07 C
ATOM 10 O3' C A 28 75.123 16.060 104.913 1.00 72.83 O
ATOM 11 C2' C A 28 73.217 14.601 105.365 1.00 71.18 C
ATOM 12 O2' C A 28 73.290 15.031 106.711 1.00 69.89 O
ATOM 13 C1' C A 28 71.762 14.671 104.894 1.00 71.89 C
ATOM 14 N1 C A 28 71.389 13.581 103.965 1.00 71.24 N
ATOM 15 C2 C A 28 71.306 12.268 104.460 1.00 70.08 C
ATOM 16 O2 C A 28 71.568 12.052 105.652 1.00 68.86 O
ATOM 17 N3 C A 28 70.947 11.268 103.625 1.00 70.46 N
ATOM 18 C4 C A 28 70.680 11.529 102.346 1.00 70.60 C
ATOM 19 N4 C A 28 70.321 10.509 101.567 1.00 70.63 N
ATOM 20 C5 C A 28 70.766 12.847 101.811 1.00 71.35 C
ATOM 21 C6 C A 28 71.120 13.834 102.647 1.00 72.09 C
ATOM 22 P C A 29 76.515 15.539 104.294 1.00 74.79 P
ATOM 23 OP1 C A 29 77.548 15.789 105.335 1.00 72.73 O
ATOM 24 OP2 C A 29 76.693 16.110 102.935 1.00 74.53 O
ATOM 25 O5' C A 29 76.313 13.967 104.090 1.00 75.50 O
TER
ATOM 1 O3' U B 54 66.007 12.188 113.866 1.00 83.15 O
ATOM 2 P A B 55 66.390 12.495 115.394 1.00 83.89 P
ATOM 3 OP1 A B 55 66.249 11.218 116.140 1.00 83.81 O
ATOM 4 OP2 A B 55 65.623 13.693 115.836 1.00 84.27 O
ATOM 5 O5' A B 55 67.938 12.881 115.340 1.00 81.84 O
ATOM 6 C5' A B 55 68.618 13.384 116.514 1.00 80.16 C
ATOM 7 C4' A B 55 69.777 14.277 116.119 1.00 79.42 C
ATOM 8 O4' A B 55 70.726 13.511 115.336 1.00 79.05 O
ATOM 9 C3' A B 55 69.440 15.474 115.244 1.00 79.46 C
ATOM 10 O3' A B 55 69.049 16.594 116.035 1.00 79.31 O
ATOM 11 C2' A B 55 70.764 15.748 114.544 1.00 79.69 C
ATOM 12 O2' A B 55 71.665 16.454 115.373 1.00 82.04 O
ATOM 13 C1' A B 55 71.290 14.328 114.323 1.00 78.01 C
ATOM 14 N9 A B 55 70.933 13.745 113.028 1.00 76.44 N
ATOM 15 C8 A B 55 69.997 12.764 112.807 1.00 76.25 C
ATOM 16 N7 A B 55 69.888 12.408 111.551 1.00 75.96 N
ATOM 17 C5 A B 55 70.807 13.214 110.895 1.00 74.37 C
ATOM 18 C6 A B 55 71.165 13.321 109.542 1.00 72.80 C
ATOM 19 N6 A B 55 70.605 12.593 108.572 1.00 71.03 N
ATOM 20 N1 A B 55 72.123 14.213 109.215 1.00 71.91 N
ATOM 21 C2 A B 55 72.668 14.950 110.190 1.00 73.24 C
ATOM 22 N3 A B 55 72.408 14.949 111.499 1.00 74.18 N
ATOM 23 C4 A B 55 71.457 14.046 111.791 1.00 74.98 C
ATOM 24 P A B 56 67.642 17.326 115.762 1.00 79.50 P
ATOM 25 OP1 A B 56 67.418 18.225 116.924 1.00 79.28 O
ATOM 26 OP2 A B 56 66.623 16.295 115.427 1.00 77.56 O
ATOM 27 O5' A B 56 67.902 18.247 114.484 1.00 78.01 O
TER
ATOM 2 P C A 28 71.719 17.284 100.696 1.00 66.69 P
ATOM 3 OP1 C A 28 72.197 18.607 100.243 1.00 66.57 O
ATOM 4 OP2 C A 28 71.487 16.213 99.696 1.00 66.83 O
ATOM 5 O5' C A 28 72.707 16.750 101.828 1.00 68.77 O
ATOM 6 C5' C A 28 72.931 17.528 103.023 1.00 69.92 C
ATOM 7 C4' C A 28 72.841 16.658 104.257 1.00 71.58 C
ATOM 8 O4' C A 28 71.581 15.929 104.251 1.00 71.72 O
ATOM 9 C3' C A 28 73.889 15.565 104.396 1.00 72.07 C
ATOM 10 O3' C A 28 75.123 16.060 104.913 1.00 72.83 O
ATOM 11 C2' C A 28 73.217 14.601 105.365 1.00 71.18 C
ATOM 12 O2' C A 28 73.290 15.031 106.711 1.00 69.89 O
ATOM 13 C1' C A 28 71.762 14.671 104.894 1.00 71.89 C
ATOM 14 N1 C A 28 71.389 13.581 103.965 1.00 71.24 N
ATOM 15 C2 C A 28 71.306 12.268 104.460 1.00 70.08 C
ATOM 16 O2 C A 28 71.568 12.052 105.652 1.00 68.86 O
ATOM 17 N3 C A 28 70.947 11.268 103.625 1.00 70.46 N
ATOM 18 C4 C A 28 70.680 11.529 102.346 1.00 70.60 C
ATOM 19 N4 C A 28 70.321 10.509 101.567 1.00 70.63 N
ATOM 20 C5 C A 28 70.766 12.847 101.811 1.00 71.35 C
ATOM 21 C6 C A 28 71.120 13.834 102.647 1.00 72.09 C
ATOM 22 P C A 29 76.515 15.539 104.294 1.00 74.79 P
ATOM 23 OP1 C A 29 77.548 15.789 105.335 1.00 72.73 O
ATOM 24 OP2 C A 29 76.693 16.110 102.935 1.00 74.53 O
ATOM 25 O5' C A 29 76.313 13.967 104.090 1.00 75.50 O
TER
ATOM 1 O3' U B 54 66.007 12.188 113.866 1.00 83.15 O
ATOM 2 P A B 55 66.390 12.495 115.394 1.00 83.89 P
ATOM 3 OP1 A B 55 66.249 11.218 116.140 1.00 83.81 O
ATOM 4 OP2 A B 55 65.623 13.693 115.836 1.00 84.27 O
ATOM 5 O5' A B 55 67.938 12.881 115.340 1.00 81.84 O
ATOM 6 C5' A B 55 68.618 13.384 116.514 1.00 80.16 C
ATOM 7 C4' A B 55 69.777 14.277 116.119 1.00 79.42 C
ATOM 8 O4' A B 55 70.726 13.511 115.336 1.00 79.05 O
ATOM 9 C3' A B 55 69.440 15.474 115.244 1.00 79.46 C
ATOM 10 O3' A B 55 69.049 16.594 116.035 1.00 79.31 O
ATOM 11 C2' A B 55 70.764 15.748 114.544 1.00 79.69 C
ATOM 12 O2' A B 55 71.665 16.454 115.373 1.00 82.04 O
ATOM 13 C1' A B 55 71.290 14.328 114.323 1.00 78.01 C
ATOM 14 N9 A B 55 70.933 13.745 113.028 1.00 76.44 N
ATOM 15 C8 A B 55 69.997 12.764 112.807 1.00 76.25 C
ATOM 16 N7 A B 55 69.888 12.408 111.551 1.00 75.96 N
ATOM 17 C5 A B 55 70.807 13.214 110.895 1.00 74.37 C
ATOM 18 C6 A B 55 71.165 13.321 109.542 1.00 72.80 C
ATOM 19 N6 A B 55 70.605 12.593 108.572 1.00 71.03 N
ATOM 20 N1 A B 55 72.123 14.213 109.215 1.00 71.91 N
ATOM 21 C2 A B 55 72.668 14.950 110.190 1.00 73.24 C
ATOM 22 N3 A B 55 72.408 14.949 111.499 1.00 74.18 N
ATOM 23 C4 A B 55 71.457 14.046 111.791 1.00 74.98 C
ATOM 24 P A B 56 67.642 17.326 115.762 1.00 79.50 P
ATOM 25 OP1 A B 56 67.418 18.225 116.924 1.00 79.28 O
ATOM 26 OP2 A B 56 66.623 16.295 115.427 1.00 77.56 O
ATOM 27 O5' A B 56 67.902 18.247 114.484 1.00 78.01 O
TER
Atoms:
C2: (71.306,12.268,104.460)
OP1: (72.197,18.607,100.243)
OP2: (71.487,16.213,99.696)
C4: (70.680,11.529,102.346)
O5': (72.707,16.750,101.828)
C3': (73.889,15.565,104.396)
C1': (71.762,14.671,104.894)
O4': (71.581,15.929,104.251)
C5': (72.931,17.528,103.023)
P: (71.719,17.284,100.696)
O2: (71.568,12.052,105.652)
C4': (72.841,16.658,104.257)
C2': (73.217,14.601,105.365)
O2': (73.290,15.031,106.711)
N1: (71.389,13.581,103.965)
N3: (70.947,11.268,103.625)
N4: (70.321,10.509,101.567)
C6: (71.120,13.834,102.647)
C5: (70.766,12.847,101.811)
O3': (75.123,16.060,104.913)
OP1: (72.197,18.607,100.243)
OP2: (71.487,16.213,99.696)
C4: (70.680,11.529,102.346)
O5': (72.707,16.750,101.828)
C3': (73.889,15.565,104.396)
C1': (71.762,14.671,104.894)
O4': (71.581,15.929,104.251)
C5': (72.931,17.528,103.023)
P: (71.719,17.284,100.696)
O2: (71.568,12.052,105.652)
C4': (72.841,16.658,104.257)
C2': (73.217,14.601,105.365)
O2': (73.290,15.031,106.711)
N1: (71.389,13.581,103.965)
N3: (70.947,11.268,103.625)
N4: (70.321,10.509,101.567)
C6: (71.120,13.834,102.647)
C5: (70.766,12.847,101.811)
O3': (75.123,16.060,104.913)
OP1: (66.249,11.218,116.140)
OP2: (65.623,13.693,115.836)
C3': (69.440,15.474,115.244)
C1': (71.290,14.328,114.323)
C5': (68.618,13.384,116.514)
O4': (70.726,13.511,115.336)
C8: (69.997,12.764,112.807)
O2': (71.665,16.454,115.373)
C6: (71.165,13.321,109.542)
C5: (70.807,13.214,110.895)
C4: (71.457,14.046,111.791)
P: (66.390,12.495,115.394)
C4': (69.777,14.277,116.119)
C2': (70.764,15.748,114.544)
C2: (72.668,14.950,110.190)
N1: (72.123,14.213,109.215)
N3: (72.408,14.949,111.499)
N6: (70.605,12.593,108.572)
N7: (69.888,12.408,111.551)
N9: (70.933,13.745,113.028)
O5': (67.938,12.881,115.340)
O3': (69.049,16.594,116.035)
OP2: (65.623,13.693,115.836)
C3': (69.440,15.474,115.244)
C1': (71.290,14.328,114.323)
C5': (68.618,13.384,116.514)
O4': (70.726,13.511,115.336)
C8: (69.997,12.764,112.807)
O2': (71.665,16.454,115.373)
C6: (71.165,13.321,109.542)
C5: (70.807,13.214,110.895)
C4: (71.457,14.046,111.791)
P: (66.390,12.495,115.394)
C4': (69.777,14.277,116.119)
C2': (70.764,15.748,114.544)
C2: (72.668,14.950,110.190)
N1: (72.123,14.213,109.215)
N3: (72.408,14.949,111.499)
N6: (70.605,12.593,108.572)
N7: (69.888,12.408,111.551)
N9: (70.933,13.745,113.028)
O5': (67.938,12.881,115.340)
O3': (69.049,16.594,116.035)
Image (generated by PyMOL):