Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A1125:A1124
Extra
PDB:
ATOM 1 O3' U A1124 -166.379 61.194 1.900 1.00 64.62 O
ATOM 2 P G A1125 -167.177 60.573 3.146 1.00 67.69 P
ATOM 3 OP1 G A1125 -167.320 59.115 2.887 1.00 67.69 O
ATOM 4 OP2 G A1125 -168.402 61.387 3.332 1.00 67.69 O
ATOM 5 O5' G A1125 -166.181 60.819 4.362 1.00 67.69 O
ATOM 6 C5' G A1125 -165.137 59.904 4.641 1.00 67.69 C
ATOM 7 C4' G A1125 -163.809 60.603 4.782 1.00 67.69 C
ATOM 8 O4' G A1125 -163.488 61.329 3.559 1.00 67.69 O
ATOM 9 C3' G A1125 -163.724 61.675 5.854 1.00 67.69 C
ATOM 10 O3' G A1125 -163.595 61.162 7.162 1.00 67.69 O
ATOM 11 C2' G A1125 -162.524 62.473 5.389 1.00 67.69 C
ATOM 12 O2' G A1125 -161.322 61.753 5.615 1.00 67.69 O
ATOM 13 C1' G A1125 -162.791 62.517 3.890 1.00 67.69 C
ATOM 14 N9 G A1125 -163.637 63.669 3.548 1.00 67.51 N
ATOM 15 C8 G A1125 -164.903 63.704 3.011 1.00 67.51 C
ATOM 16 N7 G A1125 -165.368 64.920 2.873 1.00 67.51 N
ATOM 17 C5 G A1125 -164.356 65.726 3.365 1.00 67.51 C
ATOM 18 C6 G A1125 -164.290 67.127 3.473 1.00 67.51 C
ATOM 19 O6 G A1125 -165.147 67.951 3.141 1.00 67.51 O
ATOM 20 N1 G A1125 -163.070 67.517 4.028 1.00 67.51 N
ATOM 21 C2 G A1125 -162.049 66.666 4.432 1.00 67.51 C
ATOM 22 N2 G A1125 -160.942 67.225 4.949 1.00 67.51 N
ATOM 23 N3 G A1125 -162.106 65.351 4.336 1.00 67.51 N
ATOM 24 C4 G A1125 -163.283 64.966 3.795 1.00 67.51 C
ATOM 25 P C A1126 -163.991 62.080 8.414 1.00 72.19 P
ATOM 26 OP1 C A1126 -163.429 61.440 9.622 1.00 72.19 O
ATOM 27 OP2 C A1126 -165.453 62.308 8.342 1.00 72.19 O
ATOM 28 O5' C A1126 -163.215 63.434 8.117 1.00 72.19 O
TER
ATOM 1 O3' U B1123 -169.171 65.466 -2.051 1.00 74.84 O
ATOM 2 P U B1124 -170.137 64.459 -1.251 1.00 64.62 P
ATOM 3 OP1 U B1124 -171.156 63.974 -2.224 1.00 64.62 O
ATOM 4 OP2 U B1124 -170.593 65.172 -0.031 1.00 64.62 O
ATOM 5 O5' U B1124 -169.159 63.260 -0.848 1.00 64.62 O
ATOM 6 C5' U B1124 -169.483 62.378 0.228 1.00 64.62 C
ATOM 7 C4' U B1124 -168.356 61.414 0.530 1.00 64.62 C
ATOM 8 O4' U B1124 -168.046 60.661 -0.665 1.00 64.62 O
ATOM 9 C3' U B1124 -167.044 62.055 0.980 1.00 64.62 C
ATOM 10 O3' U B1124 -166.379 61.194 1.900 1.00 64.62 O
ATOM 11 C2' U B1124 -166.241 62.129 -0.307 1.00 64.62 C
ATOM 12 O2' U B1124 -164.842 62.153 -0.116 1.00 64.62 O
ATOM 13 C1' U B1124 -166.695 60.858 -1.024 1.00 64.62 C
ATOM 14 N1 U B1124 -166.639 60.942 -2.485 1.00 64.40 N
ATOM 15 C2 U B1124 -165.414 61.004 -3.109 1.00 64.40 C
ATOM 16 O2 U B1124 -164.364 61.004 -2.485 1.00 64.40 O
ATOM 17 N3 U B1124 -165.474 61.072 -4.485 1.00 64.40 N
ATOM 18 C4 U B1124 -166.620 61.078 -5.271 1.00 64.40 C
ATOM 19 O4 U B1124 -166.537 61.139 -6.506 1.00 64.40 O
ATOM 20 C5 U B1124 -167.848 61.007 -4.531 1.00 64.40 C
ATOM 21 C6 U B1124 -167.810 60.942 -3.196 1.00 64.40 C
ATOM 22 P G B1125 -167.177 60.573 3.146 1.00 67.69 P
ATOM 23 OP1 G B1125 -167.320 59.115 2.887 1.00 67.69 O
ATOM 24 OP2 G B1125 -168.402 61.387 3.332 1.00 67.69 O
ATOM 25 O5' G B1125 -166.181 60.819 4.362 1.00 67.69 O
TER
ATOM 2 P G A1125 -167.177 60.573 3.146 1.00 67.69 P
ATOM 3 OP1 G A1125 -167.320 59.115 2.887 1.00 67.69 O
ATOM 4 OP2 G A1125 -168.402 61.387 3.332 1.00 67.69 O
ATOM 5 O5' G A1125 -166.181 60.819 4.362 1.00 67.69 O
ATOM 6 C5' G A1125 -165.137 59.904 4.641 1.00 67.69 C
ATOM 7 C4' G A1125 -163.809 60.603 4.782 1.00 67.69 C
ATOM 8 O4' G A1125 -163.488 61.329 3.559 1.00 67.69 O
ATOM 9 C3' G A1125 -163.724 61.675 5.854 1.00 67.69 C
ATOM 10 O3' G A1125 -163.595 61.162 7.162 1.00 67.69 O
ATOM 11 C2' G A1125 -162.524 62.473 5.389 1.00 67.69 C
ATOM 12 O2' G A1125 -161.322 61.753 5.615 1.00 67.69 O
ATOM 13 C1' G A1125 -162.791 62.517 3.890 1.00 67.69 C
ATOM 14 N9 G A1125 -163.637 63.669 3.548 1.00 67.51 N
ATOM 15 C8 G A1125 -164.903 63.704 3.011 1.00 67.51 C
ATOM 16 N7 G A1125 -165.368 64.920 2.873 1.00 67.51 N
ATOM 17 C5 G A1125 -164.356 65.726 3.365 1.00 67.51 C
ATOM 18 C6 G A1125 -164.290 67.127 3.473 1.00 67.51 C
ATOM 19 O6 G A1125 -165.147 67.951 3.141 1.00 67.51 O
ATOM 20 N1 G A1125 -163.070 67.517 4.028 1.00 67.51 N
ATOM 21 C2 G A1125 -162.049 66.666 4.432 1.00 67.51 C
ATOM 22 N2 G A1125 -160.942 67.225 4.949 1.00 67.51 N
ATOM 23 N3 G A1125 -162.106 65.351 4.336 1.00 67.51 N
ATOM 24 C4 G A1125 -163.283 64.966 3.795 1.00 67.51 C
ATOM 25 P C A1126 -163.991 62.080 8.414 1.00 72.19 P
ATOM 26 OP1 C A1126 -163.429 61.440 9.622 1.00 72.19 O
ATOM 27 OP2 C A1126 -165.453 62.308 8.342 1.00 72.19 O
ATOM 28 O5' C A1126 -163.215 63.434 8.117 1.00 72.19 O
TER
ATOM 1 O3' U B1123 -169.171 65.466 -2.051 1.00 74.84 O
ATOM 2 P U B1124 -170.137 64.459 -1.251 1.00 64.62 P
ATOM 3 OP1 U B1124 -171.156 63.974 -2.224 1.00 64.62 O
ATOM 4 OP2 U B1124 -170.593 65.172 -0.031 1.00 64.62 O
ATOM 5 O5' U B1124 -169.159 63.260 -0.848 1.00 64.62 O
ATOM 6 C5' U B1124 -169.483 62.378 0.228 1.00 64.62 C
ATOM 7 C4' U B1124 -168.356 61.414 0.530 1.00 64.62 C
ATOM 8 O4' U B1124 -168.046 60.661 -0.665 1.00 64.62 O
ATOM 9 C3' U B1124 -167.044 62.055 0.980 1.00 64.62 C
ATOM 10 O3' U B1124 -166.379 61.194 1.900 1.00 64.62 O
ATOM 11 C2' U B1124 -166.241 62.129 -0.307 1.00 64.62 C
ATOM 12 O2' U B1124 -164.842 62.153 -0.116 1.00 64.62 O
ATOM 13 C1' U B1124 -166.695 60.858 -1.024 1.00 64.62 C
ATOM 14 N1 U B1124 -166.639 60.942 -2.485 1.00 64.40 N
ATOM 15 C2 U B1124 -165.414 61.004 -3.109 1.00 64.40 C
ATOM 16 O2 U B1124 -164.364 61.004 -2.485 1.00 64.40 O
ATOM 17 N3 U B1124 -165.474 61.072 -4.485 1.00 64.40 N
ATOM 18 C4 U B1124 -166.620 61.078 -5.271 1.00 64.40 C
ATOM 19 O4 U B1124 -166.537 61.139 -6.506 1.00 64.40 O
ATOM 20 C5 U B1124 -167.848 61.007 -4.531 1.00 64.40 C
ATOM 21 C6 U B1124 -167.810 60.942 -3.196 1.00 64.40 C
ATOM 22 P G B1125 -167.177 60.573 3.146 1.00 67.69 P
ATOM 23 OP1 G B1125 -167.320 59.115 2.887 1.00 67.69 O
ATOM 24 OP2 G B1125 -168.402 61.387 3.332 1.00 67.69 O
ATOM 25 O5' G B1125 -166.181 60.819 4.362 1.00 67.69 O
TER
Atoms:
OP1: (-167.320,59.115,2.887)
OP2: (-168.402,61.387,3.332)
C3': (-163.724,61.675,5.854)
C1': (-162.791,62.517,3.890)
C5': (-165.137,59.904,4.641)
O6: (-165.147,67.951,3.141)
O4': (-163.488,61.329,3.559)
C8: (-164.903,63.704,3.011)
C2: (-162.049,66.666,4.432)
C6: (-164.290,67.127,3.473)
C5: (-164.356,65.726,3.365)
C4: (-163.283,64.966,3.795)
P: (-167.177,60.573,3.146)
C4': (-163.809,60.603,4.782)
C2': (-162.524,62.473,5.389)
O2': (-161.322,61.753,5.615)
N1: (-163.070,67.517,4.028)
N2: (-160.942,67.225,4.949)
N3: (-162.106,65.351,4.336)
N7: (-165.368,64.920,2.873)
N9: (-163.637,63.669,3.548)
O5': (-166.181,60.819,4.362)
O3': (-163.595,61.162,7.162)
OP2: (-168.402,61.387,3.332)
C3': (-163.724,61.675,5.854)
C1': (-162.791,62.517,3.890)
C5': (-165.137,59.904,4.641)
O6: (-165.147,67.951,3.141)
O4': (-163.488,61.329,3.559)
C8: (-164.903,63.704,3.011)
C2: (-162.049,66.666,4.432)
C6: (-164.290,67.127,3.473)
C5: (-164.356,65.726,3.365)
C4: (-163.283,64.966,3.795)
P: (-167.177,60.573,3.146)
C4': (-163.809,60.603,4.782)
C2': (-162.524,62.473,5.389)
O2': (-161.322,61.753,5.615)
N1: (-163.070,67.517,4.028)
N2: (-160.942,67.225,4.949)
N3: (-162.106,65.351,4.336)
N7: (-165.368,64.920,2.873)
N9: (-163.637,63.669,3.548)
O5': (-166.181,60.819,4.362)
O3': (-163.595,61.162,7.162)
C4: (-166.620,61.078,-5.271)
N3: (-165.474,61.072,-4.485)
OP1: (-171.156,63.974,-2.224)
OP2: (-170.593,65.172,-0.031)
C2: (-165.414,61.004,-3.109)
C1': (-166.695,60.858,-1.024)
C3': (-167.044,62.055,0.980)
O5': (-169.159,63.260,-0.848)
O4': (-168.046,60.661,-0.665)
C5': (-169.483,62.378,0.228)
P: (-170.137,64.459,-1.251)
C4': (-168.356,61.414,0.530)
C2': (-166.241,62.129,-0.307)
O2': (-164.842,62.153,-0.116)
N1: (-166.639,60.942,-2.485)
O4: (-166.537,61.139,-6.506)
O2: (-164.364,61.004,-2.485)
C6: (-167.810,60.942,-3.196)
C5: (-167.848,61.007,-4.531)
O3': (-166.379,61.194,1.900)
N3: (-165.474,61.072,-4.485)
OP1: (-171.156,63.974,-2.224)
OP2: (-170.593,65.172,-0.031)
C2: (-165.414,61.004,-3.109)
C1': (-166.695,60.858,-1.024)
C3': (-167.044,62.055,0.980)
O5': (-169.159,63.260,-0.848)
O4': (-168.046,60.661,-0.665)
C5': (-169.483,62.378,0.228)
P: (-170.137,64.459,-1.251)
C4': (-168.356,61.414,0.530)
C2': (-166.241,62.129,-0.307)
O2': (-164.842,62.153,-0.116)
N1: (-166.639,60.942,-2.485)
O4: (-166.537,61.139,-6.506)
O2: (-164.364,61.004,-2.485)
C6: (-167.810,60.942,-3.196)
C5: (-167.848,61.007,-4.531)
O3': (-166.379,61.194,1.900)
Image (generated by PyMOL):