Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1588:A1242
Extra
PDB:
ATOM 1 O3' G A1587 38.669 -71.287 -3.828 1.00 51.53 O
ATOM 2 P C A1588 40.095 -70.635 -3.511 1.00 48.24 P
ATOM 3 OP1 C A1588 40.156 -69.223 -4.021 1.00 42.91 O
ATOM 4 OP2 C A1588 41.101 -71.616 -3.970 1.00 48.15 O
ATOM 5 O5' C A1588 40.105 -70.586 -1.921 1.00 42.72 O
ATOM 6 C5' C A1588 40.640 -71.669 -1.179 1.00 47.17 C
ATOM 7 C4' C A1588 39.555 -72.645 -0.838 1.00 49.02 C
ATOM 8 O4' C A1588 39.979 -73.961 -1.253 1.00 40.57 O
ATOM 9 C3' C A1588 39.235 -72.759 0.650 1.00 46.61 C
ATOM 10 O3' C A1588 38.281 -71.769 1.058 1.00 42.73 O
ATOM 11 C2' C A1588 38.745 -74.199 0.763 1.00 46.07 C
ATOM 12 O2' C A1588 37.387 -74.385 0.405 1.00 46.94 O
ATOM 13 C1' C A1588 39.637 -74.910 -0.260 1.00 41.99 C
ATOM 14 N1 C A1588 40.899 -75.391 0.338 1.00 46.42 N
ATOM 15 C2 C A1588 40.907 -76.583 1.086 1.00 46.03 C
ATOM 16 O2 C A1588 39.860 -77.225 1.199 1.00 43.27 O
ATOM 17 N3 C A1588 42.068 -76.994 1.661 1.00 46.78 N
ATOM 18 C4 C A1588 43.183 -76.259 1.520 1.00 43.56 C
ATOM 19 N4 C A1588 44.302 -76.675 2.128 1.00 46.20 N
ATOM 20 C5 C A1588 43.204 -75.060 0.753 1.00 40.25 C
ATOM 21 C6 C A1588 42.055 -74.669 0.183 1.00 45.45 C
ATOM 22 P G A1589 37.989 -71.527 2.615 1.00 43.93 P
ATOM 23 OP1 G A1589 36.708 -70.779 2.729 1.00 45.51 O
ATOM 24 OP2 G A1589 39.225 -70.958 3.218 1.00 49.11 O
ATOM 25 O5' G A1589 37.748 -73.004 3.160 1.00 46.38 O
TER
ATOM 1 O3' A B1241 29.239 -82.956 2.753 1.00 44.31 O
ATOM 2 P A B1242 30.850 -83.171 2.922 1.00 49.86 P
ATOM 3 OP1 A B1242 31.579 -83.051 1.639 1.00 46.61 O
ATOM 4 OP2 A B1242 31.128 -84.332 3.824 1.00 45.50 O
ATOM 5 O5' A B1242 31.250 -81.870 3.753 1.00 45.41 O
ATOM 6 C5' A B1242 30.315 -81.295 4.667 1.00 50.60 C
ATOM 7 C4' A B1242 30.414 -79.782 4.669 1.00 52.83 C
ATOM 8 O4' A B1242 31.697 -79.389 5.198 1.00 47.35 O
ATOM 9 C3' A B1242 30.248 -79.053 3.341 1.00 49.52 C
ATOM 10 O3' A B1242 28.858 -78.745 3.234 1.00 54.08 O
ATOM 11 C2' A B1242 31.059 -77.776 3.568 1.00 47.70 C
ATOM 12 O2' A B1242 30.327 -76.816 4.294 1.00 47.34 O
ATOM 13 C1' A B1242 32.174 -78.265 4.498 1.00 47.61 C
ATOM 14 N9 A B1242 33.406 -78.679 3.844 1.00 46.01 N
ATOM 15 C8 A B1242 33.814 -79.978 3.659 1.00 45.81 C
ATOM 16 N7 A B1242 34.970 -80.087 3.070 1.00 41.56 N
ATOM 17 C5 A B1242 35.350 -78.776 2.839 1.00 44.51 C
ATOM 18 C6 A B1242 36.477 -78.234 2.241 1.00 45.22 C
ATOM 19 N6 A B1242 37.470 -78.994 1.761 1.00 45.64 N
ATOM 20 N1 A B1242 36.564 -76.887 2.151 1.00 45.67 N
ATOM 21 C2 A B1242 35.567 -76.153 2.653 1.00 44.74 C
ATOM 22 N3 A B1242 34.445 -76.553 3.252 1.00 45.67 N
ATOM 23 C4 A B1242 34.396 -77.896 3.310 1.00 45.51 C
ATOM 24 P U B1243 28.130 -78.701 1.801 1.00 56.09 P
ATOM 25 OP1 U B1243 26.849 -78.002 2.057 1.00 53.61 O
ATOM 26 OP2 U B1243 28.089 -80.050 1.245 1.00 48.53 O
ATOM 27 O5' U B1243 29.009 -77.736 0.887 1.00 49.91 O
TER
ATOM 2 P C A1588 40.095 -70.635 -3.511 1.00 48.24 P
ATOM 3 OP1 C A1588 40.156 -69.223 -4.021 1.00 42.91 O
ATOM 4 OP2 C A1588 41.101 -71.616 -3.970 1.00 48.15 O
ATOM 5 O5' C A1588 40.105 -70.586 -1.921 1.00 42.72 O
ATOM 6 C5' C A1588 40.640 -71.669 -1.179 1.00 47.17 C
ATOM 7 C4' C A1588 39.555 -72.645 -0.838 1.00 49.02 C
ATOM 8 O4' C A1588 39.979 -73.961 -1.253 1.00 40.57 O
ATOM 9 C3' C A1588 39.235 -72.759 0.650 1.00 46.61 C
ATOM 10 O3' C A1588 38.281 -71.769 1.058 1.00 42.73 O
ATOM 11 C2' C A1588 38.745 -74.199 0.763 1.00 46.07 C
ATOM 12 O2' C A1588 37.387 -74.385 0.405 1.00 46.94 O
ATOM 13 C1' C A1588 39.637 -74.910 -0.260 1.00 41.99 C
ATOM 14 N1 C A1588 40.899 -75.391 0.338 1.00 46.42 N
ATOM 15 C2 C A1588 40.907 -76.583 1.086 1.00 46.03 C
ATOM 16 O2 C A1588 39.860 -77.225 1.199 1.00 43.27 O
ATOM 17 N3 C A1588 42.068 -76.994 1.661 1.00 46.78 N
ATOM 18 C4 C A1588 43.183 -76.259 1.520 1.00 43.56 C
ATOM 19 N4 C A1588 44.302 -76.675 2.128 1.00 46.20 N
ATOM 20 C5 C A1588 43.204 -75.060 0.753 1.00 40.25 C
ATOM 21 C6 C A1588 42.055 -74.669 0.183 1.00 45.45 C
ATOM 22 P G A1589 37.989 -71.527 2.615 1.00 43.93 P
ATOM 23 OP1 G A1589 36.708 -70.779 2.729 1.00 45.51 O
ATOM 24 OP2 G A1589 39.225 -70.958 3.218 1.00 49.11 O
ATOM 25 O5' G A1589 37.748 -73.004 3.160 1.00 46.38 O
TER
ATOM 1 O3' A B1241 29.239 -82.956 2.753 1.00 44.31 O
ATOM 2 P A B1242 30.850 -83.171 2.922 1.00 49.86 P
ATOM 3 OP1 A B1242 31.579 -83.051 1.639 1.00 46.61 O
ATOM 4 OP2 A B1242 31.128 -84.332 3.824 1.00 45.50 O
ATOM 5 O5' A B1242 31.250 -81.870 3.753 1.00 45.41 O
ATOM 6 C5' A B1242 30.315 -81.295 4.667 1.00 50.60 C
ATOM 7 C4' A B1242 30.414 -79.782 4.669 1.00 52.83 C
ATOM 8 O4' A B1242 31.697 -79.389 5.198 1.00 47.35 O
ATOM 9 C3' A B1242 30.248 -79.053 3.341 1.00 49.52 C
ATOM 10 O3' A B1242 28.858 -78.745 3.234 1.00 54.08 O
ATOM 11 C2' A B1242 31.059 -77.776 3.568 1.00 47.70 C
ATOM 12 O2' A B1242 30.327 -76.816 4.294 1.00 47.34 O
ATOM 13 C1' A B1242 32.174 -78.265 4.498 1.00 47.61 C
ATOM 14 N9 A B1242 33.406 -78.679 3.844 1.00 46.01 N
ATOM 15 C8 A B1242 33.814 -79.978 3.659 1.00 45.81 C
ATOM 16 N7 A B1242 34.970 -80.087 3.070 1.00 41.56 N
ATOM 17 C5 A B1242 35.350 -78.776 2.839 1.00 44.51 C
ATOM 18 C6 A B1242 36.477 -78.234 2.241 1.00 45.22 C
ATOM 19 N6 A B1242 37.470 -78.994 1.761 1.00 45.64 N
ATOM 20 N1 A B1242 36.564 -76.887 2.151 1.00 45.67 N
ATOM 21 C2 A B1242 35.567 -76.153 2.653 1.00 44.74 C
ATOM 22 N3 A B1242 34.445 -76.553 3.252 1.00 45.67 N
ATOM 23 C4 A B1242 34.396 -77.896 3.310 1.00 45.51 C
ATOM 24 P U B1243 28.130 -78.701 1.801 1.00 56.09 P
ATOM 25 OP1 U B1243 26.849 -78.002 2.057 1.00 53.61 O
ATOM 26 OP2 U B1243 28.089 -80.050 1.245 1.00 48.53 O
ATOM 27 O5' U B1243 29.009 -77.736 0.887 1.00 49.91 O
TER
Atoms:
C2: (40.907,-76.583,1.086)
OP1: (40.156,-69.223,-4.021)
OP2: (41.101,-71.616,-3.970)
C4: (43.183,-76.259,1.520)
O5': (40.105,-70.586,-1.921)
C3': (39.235,-72.759,0.650)
C1': (39.637,-74.910,-0.260)
O4': (39.979,-73.961,-1.253)
C5': (40.640,-71.669,-1.179)
P: (40.095,-70.635,-3.511)
O2: (39.860,-77.225,1.199)
C4': (39.555,-72.645,-0.838)
C2': (38.745,-74.199,0.763)
O2': (37.387,-74.385,0.405)
N1: (40.899,-75.391,0.338)
N3: (42.068,-76.994,1.661)
N4: (44.302,-76.675,2.128)
C6: (42.055,-74.669,0.183)
C5: (43.204,-75.060,0.753)
O3': (38.281,-71.769,1.058)
OP1: (40.156,-69.223,-4.021)
OP2: (41.101,-71.616,-3.970)
C4: (43.183,-76.259,1.520)
O5': (40.105,-70.586,-1.921)
C3': (39.235,-72.759,0.650)
C1': (39.637,-74.910,-0.260)
O4': (39.979,-73.961,-1.253)
C5': (40.640,-71.669,-1.179)
P: (40.095,-70.635,-3.511)
O2: (39.860,-77.225,1.199)
C4': (39.555,-72.645,-0.838)
C2': (38.745,-74.199,0.763)
O2': (37.387,-74.385,0.405)
N1: (40.899,-75.391,0.338)
N3: (42.068,-76.994,1.661)
N4: (44.302,-76.675,2.128)
C6: (42.055,-74.669,0.183)
C5: (43.204,-75.060,0.753)
O3': (38.281,-71.769,1.058)
OP1: (31.579,-83.051,1.639)
OP2: (31.128,-84.332,3.824)
C3': (30.248,-79.053,3.341)
C1': (32.174,-78.265,4.498)
C5': (30.315,-81.295,4.667)
O4': (31.697,-79.389,5.198)
C8: (33.814,-79.978,3.659)
O2': (30.327,-76.816,4.294)
C6: (36.477,-78.234,2.241)
C5: (35.350,-78.776,2.839)
C4: (34.396,-77.896,3.310)
P: (30.850,-83.171,2.922)
C4': (30.414,-79.782,4.669)
C2': (31.059,-77.776,3.568)
C2: (35.567,-76.153,2.653)
N1: (36.564,-76.887,2.151)
N3: (34.445,-76.553,3.252)
N6: (37.470,-78.994,1.761)
N7: (34.970,-80.087,3.070)
N9: (33.406,-78.679,3.844)
O5': (31.250,-81.870,3.753)
O3': (28.858,-78.745,3.234)
OP2: (31.128,-84.332,3.824)
C3': (30.248,-79.053,3.341)
C1': (32.174,-78.265,4.498)
C5': (30.315,-81.295,4.667)
O4': (31.697,-79.389,5.198)
C8: (33.814,-79.978,3.659)
O2': (30.327,-76.816,4.294)
C6: (36.477,-78.234,2.241)
C5: (35.350,-78.776,2.839)
C4: (34.396,-77.896,3.310)
P: (30.850,-83.171,2.922)
C4': (30.414,-79.782,4.669)
C2': (31.059,-77.776,3.568)
C2: (35.567,-76.153,2.653)
N1: (36.564,-76.887,2.151)
N3: (34.445,-76.553,3.252)
N6: (37.470,-78.994,1.761)
N7: (34.970,-80.087,3.070)
N9: (33.406,-78.679,3.844)
O5': (31.250,-81.870,3.753)
O3': (28.858,-78.745,3.234)
Image (generated by PyMOL):