Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CD6:01223:0553
Extra
PDB:
ATOM 1 O3' C A1222 7.788 89.090 98.222 1.00 35.73 O
ATOM 2 P U A1223 7.366 89.317 96.701 1.00 39.03 P
ATOM 3 OP1 U A1223 6.453 88.215 96.320 1.00 38.17 O
ATOM 4 OP2 U A1223 8.597 89.529 95.917 1.00 36.74 O
ATOM 5 O5' U A1223 6.552 90.687 96.763 1.00 36.38 O
ATOM 6 C5' U A1223 5.256 90.725 97.372 1.00 37.37 C
ATOM 7 C4' U A1223 4.663 92.109 97.297 1.00 38.89 C
ATOM 8 O4' U A1223 5.424 93.025 98.126 1.00 41.24 O
ATOM 9 C3' U A1223 4.662 92.786 95.943 1.00 38.60 C
ATOM 10 O3' U A1223 3.634 92.315 95.095 1.00 39.93 O
ATOM 11 C2' U A1223 4.468 94.244 96.330 1.00 38.85 C
ATOM 12 O2' U A1223 3.153 94.574 96.686 1.00 36.69 O
ATOM 13 C1' U A1223 5.343 94.334 97.578 1.00 40.61 C
ATOM 14 N1 U A1223 6.692 94.800 97.216 1.00 42.76 N
ATOM 15 C2 U A1223 6.897 96.168 97.176 1.00 41.63 C
ATOM 16 O2 U A1223 6.035 96.979 97.479 1.00 39.71 O
ATOM 17 N3 U A1223 8.148 96.553 96.769 1.00 41.68 N
ATOM 18 C4 U A1223 9.196 95.737 96.421 1.00 40.98 C
ATOM 19 O4 U A1223 10.247 96.246 96.038 1.00 42.37 O
ATOM 20 C5 U A1223 8.923 94.336 96.513 1.00 40.83 C
ATOM 21 C6 U A1223 7.714 93.922 96.897 1.00 42.14 C
ATOM 22 P G A1224 3.718 92.598 93.519 1.00 41.50 P
ATOM 23 OP1 G A1224 2.791 91.655 92.856 1.00 42.19 O
ATOM 24 OP2 G A1224 5.146 92.605 93.119 1.00 44.12 O
ATOM 25 O5' G A1224 3.150 94.080 93.377 1.00 38.77 O
TER
ATOM 1 O3' G B 552 -5.751 94.724 97.403 1.00 50.23 O
ATOM 2 P A B 553 -5.182 93.831 98.616 1.00 51.97 P
ATOM 3 OP1 A B 553 -5.751 92.459 98.475 1.00 49.93 O
ATOM 4 OP2 A B 553 -5.339 94.568 99.899 1.00 49.44 O
ATOM 5 O5' A B 553 -3.625 93.728 98.291 1.00 49.49 O
ATOM 6 C5' A B 553 -3.172 93.055 97.101 1.00 48.29 C
ATOM 7 C4' A B 553 -1.670 93.127 96.986 1.00 47.24 C
ATOM 8 O4' A B 553 -1.242 94.441 96.549 1.00 46.43 O
ATOM 9 C3' A B 553 -0.903 92.898 98.272 1.00 47.19 C
ATOM 10 O3' A B 553 -0.810 91.514 98.581 1.00 46.25 O
ATOM 11 C2' A B 553 0.442 93.527 97.943 1.00 45.57 C
ATOM 12 O2' A B 553 1.198 92.689 97.092 1.00 44.24 O
ATOM 13 C1' A B 553 0.005 94.755 97.144 1.00 44.63 C
ATOM 14 N9 A B 553 -0.160 95.980 97.928 1.00 45.00 N
ATOM 15 C8 A B 553 -1.329 96.495 98.428 1.00 45.95 C
ATOM 16 N7 A B 553 -1.183 97.648 99.036 1.00 46.96 N
ATOM 17 C5 A B 553 0.177 97.903 98.947 1.00 45.12 C
ATOM 18 C6 A B 553 0.968 98.974 99.397 1.00 45.60 C
ATOM 19 N6 A B 553 0.484 100.029 100.050 1.00 47.14 N
ATOM 20 N1 A B 553 2.291 98.923 99.152 1.00 43.63 N
ATOM 21 C2 A B 553 2.777 97.864 98.500 1.00 45.31 C
ATOM 22 N3 A B 553 2.140 96.797 98.025 1.00 45.53 N
ATOM 23 C4 A B 553 0.823 96.877 98.283 1.00 45.64 C
ATOM 24 P A B 554 -0.831 91.044 100.115 1.00 46.64 P
ATOM 25 OP1 A B 554 -0.971 89.562 100.080 1.00 47.30 O
ATOM 26 OP2 A B 554 -1.800 91.876 100.891 1.00 43.69 O
ATOM 27 O5' A B 554 0.622 91.393 100.665 1.00 46.76 O
TER
ATOM 2 P U A1223 7.366 89.317 96.701 1.00 39.03 P
ATOM 3 OP1 U A1223 6.453 88.215 96.320 1.00 38.17 O
ATOM 4 OP2 U A1223 8.597 89.529 95.917 1.00 36.74 O
ATOM 5 O5' U A1223 6.552 90.687 96.763 1.00 36.38 O
ATOM 6 C5' U A1223 5.256 90.725 97.372 1.00 37.37 C
ATOM 7 C4' U A1223 4.663 92.109 97.297 1.00 38.89 C
ATOM 8 O4' U A1223 5.424 93.025 98.126 1.00 41.24 O
ATOM 9 C3' U A1223 4.662 92.786 95.943 1.00 38.60 C
ATOM 10 O3' U A1223 3.634 92.315 95.095 1.00 39.93 O
ATOM 11 C2' U A1223 4.468 94.244 96.330 1.00 38.85 C
ATOM 12 O2' U A1223 3.153 94.574 96.686 1.00 36.69 O
ATOM 13 C1' U A1223 5.343 94.334 97.578 1.00 40.61 C
ATOM 14 N1 U A1223 6.692 94.800 97.216 1.00 42.76 N
ATOM 15 C2 U A1223 6.897 96.168 97.176 1.00 41.63 C
ATOM 16 O2 U A1223 6.035 96.979 97.479 1.00 39.71 O
ATOM 17 N3 U A1223 8.148 96.553 96.769 1.00 41.68 N
ATOM 18 C4 U A1223 9.196 95.737 96.421 1.00 40.98 C
ATOM 19 O4 U A1223 10.247 96.246 96.038 1.00 42.37 O
ATOM 20 C5 U A1223 8.923 94.336 96.513 1.00 40.83 C
ATOM 21 C6 U A1223 7.714 93.922 96.897 1.00 42.14 C
ATOM 22 P G A1224 3.718 92.598 93.519 1.00 41.50 P
ATOM 23 OP1 G A1224 2.791 91.655 92.856 1.00 42.19 O
ATOM 24 OP2 G A1224 5.146 92.605 93.119 1.00 44.12 O
ATOM 25 O5' G A1224 3.150 94.080 93.377 1.00 38.77 O
TER
ATOM 1 O3' G B 552 -5.751 94.724 97.403 1.00 50.23 O
ATOM 2 P A B 553 -5.182 93.831 98.616 1.00 51.97 P
ATOM 3 OP1 A B 553 -5.751 92.459 98.475 1.00 49.93 O
ATOM 4 OP2 A B 553 -5.339 94.568 99.899 1.00 49.44 O
ATOM 5 O5' A B 553 -3.625 93.728 98.291 1.00 49.49 O
ATOM 6 C5' A B 553 -3.172 93.055 97.101 1.00 48.29 C
ATOM 7 C4' A B 553 -1.670 93.127 96.986 1.00 47.24 C
ATOM 8 O4' A B 553 -1.242 94.441 96.549 1.00 46.43 O
ATOM 9 C3' A B 553 -0.903 92.898 98.272 1.00 47.19 C
ATOM 10 O3' A B 553 -0.810 91.514 98.581 1.00 46.25 O
ATOM 11 C2' A B 553 0.442 93.527 97.943 1.00 45.57 C
ATOM 12 O2' A B 553 1.198 92.689 97.092 1.00 44.24 O
ATOM 13 C1' A B 553 0.005 94.755 97.144 1.00 44.63 C
ATOM 14 N9 A B 553 -0.160 95.980 97.928 1.00 45.00 N
ATOM 15 C8 A B 553 -1.329 96.495 98.428 1.00 45.95 C
ATOM 16 N7 A B 553 -1.183 97.648 99.036 1.00 46.96 N
ATOM 17 C5 A B 553 0.177 97.903 98.947 1.00 45.12 C
ATOM 18 C6 A B 553 0.968 98.974 99.397 1.00 45.60 C
ATOM 19 N6 A B 553 0.484 100.029 100.050 1.00 47.14 N
ATOM 20 N1 A B 553 2.291 98.923 99.152 1.00 43.63 N
ATOM 21 C2 A B 553 2.777 97.864 98.500 1.00 45.31 C
ATOM 22 N3 A B 553 2.140 96.797 98.025 1.00 45.53 N
ATOM 23 C4 A B 553 0.823 96.877 98.283 1.00 45.64 C
ATOM 24 P A B 554 -0.831 91.044 100.115 1.00 46.64 P
ATOM 25 OP1 A B 554 -0.971 89.562 100.080 1.00 47.30 O
ATOM 26 OP2 A B 554 -1.800 91.876 100.891 1.00 43.69 O
ATOM 27 O5' A B 554 0.622 91.393 100.665 1.00 46.76 O
TER
Atoms:
C4: (9.196,95.737,96.421)
N3: (8.148,96.553,96.769)
OP1: (6.453,88.215,96.320)
OP2: (8.597,89.529,95.917)
C2: (6.897,96.168,97.176)
C1': (5.343,94.334,97.578)
C3': (4.662,92.786,95.943)
O5': (6.552,90.687,96.763)
O4': (5.424,93.025,98.126)
C5': (5.256,90.725,97.372)
P: (7.366,89.317,96.701)
C4': (4.663,92.109,97.297)
C2': (4.468,94.244,96.330)
O2': (3.153,94.574,96.686)
N1: (6.692,94.800,97.216)
O4: (10.247,96.246,96.038)
O2: (6.035,96.979,97.479)
C6: (7.714,93.922,96.897)
C5: (8.923,94.336,96.513)
O3': (3.634,92.315,95.095)
N3: (8.148,96.553,96.769)
OP1: (6.453,88.215,96.320)
OP2: (8.597,89.529,95.917)
C2: (6.897,96.168,97.176)
C1': (5.343,94.334,97.578)
C3': (4.662,92.786,95.943)
O5': (6.552,90.687,96.763)
O4': (5.424,93.025,98.126)
C5': (5.256,90.725,97.372)
P: (7.366,89.317,96.701)
C4': (4.663,92.109,97.297)
C2': (4.468,94.244,96.330)
O2': (3.153,94.574,96.686)
N1: (6.692,94.800,97.216)
O4: (10.247,96.246,96.038)
O2: (6.035,96.979,97.479)
C6: (7.714,93.922,96.897)
C5: (8.923,94.336,96.513)
O3': (3.634,92.315,95.095)
OP1: (-5.751,92.459,98.475)
OP2: (-5.339,94.568,99.899)
C3': (-0.903,92.898,98.272)
C1': (0.005,94.755,97.144)
C5': (-3.172,93.055,97.101)
O4': (-1.242,94.441,96.549)
C8: (-1.329,96.495,98.428)
O2': (1.198,92.689,97.092)
C6: (0.968,98.974,99.397)
C5: (0.177,97.903,98.947)
C4: (0.823,96.877,98.283)
P: (-5.182,93.831,98.616)
C4': (-1.670,93.127,96.986)
C2': (0.442,93.527,97.943)
C2: (2.777,97.864,98.500)
N1: (2.291,98.923,99.152)
N3: (2.140,96.797,98.025)
N6: (0.484,100.029,100.050)
N7: (-1.183,97.648,99.036)
N9: (-0.160,95.980,97.928)
O5': (-3.625,93.728,98.291)
O3': (-0.810,91.514,98.581)
OP2: (-5.339,94.568,99.899)
C3': (-0.903,92.898,98.272)
C1': (0.005,94.755,97.144)
C5': (-3.172,93.055,97.101)
O4': (-1.242,94.441,96.549)
C8: (-1.329,96.495,98.428)
O2': (1.198,92.689,97.092)
C6: (0.968,98.974,99.397)
C5: (0.177,97.903,98.947)
C4: (0.823,96.877,98.283)
P: (-5.182,93.831,98.616)
C4': (-1.670,93.127,96.986)
C2': (0.442,93.527,97.943)
C2: (2.777,97.864,98.500)
N1: (2.291,98.923,99.152)
N3: (2.140,96.797,98.025)
N6: (0.484,100.029,100.050)
N7: (-1.183,97.648,99.036)
N9: (-0.160,95.980,97.928)
O5': (-3.625,93.728,98.291)
O3': (-0.810,91.514,98.581)
Image (generated by PyMOL):