ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHK:A489:A518

Extra

PDB:
ATOM 1 O3' G A 488 216.983 -71.705-105.560 1.00 50.66 O
ATOM 2 P U A 489 217.743 -70.560-104.686 1.00 51.96 P
ATOM 3 OP1 U A 489 216.825 -69.393-104.502 1.00 54.79 O
ATOM 4 OP2 U A 489 219.075 -70.340-105.315 1.00 45.34 O
ATOM 5 O5' U A 489 217.929 -71.324-103.299 1.00 47.58 O
ATOM 6 C5' U A 489 217.312 -72.597-103.111 1.00 41.49 C
ATOM 7 C4' U A 489 217.716 -73.240-101.809 1.00 42.95 C
ATOM 8 O4' U A 489 219.055 -73.778-101.928 1.00 37.58 O
ATOM 9 C3' U A 489 217.750 -72.321-100.593 1.00 41.66 C
ATOM 10 O3' U A 489 216.481 -72.243 -99.955 1.00 43.91 O
ATOM 11 C2' U A 489 218.818 -72.956 -99.716 1.00 38.86 C
ATOM 12 O2' U A 489 218.259 -74.027 -98.958 1.00 33.09 O
ATOM 13 C1' U A 489 219.775 -73.553-100.753 1.00 36.51 C
ATOM 14 N1 U A 489 220.904 -72.666-101.087 1.00 42.39 N
ATOM 15 C2 U A 489 221.987 -72.451-100.235 1.00 47.10 C
ATOM 16 O2 U A 489 222.087 -72.920 -99.106 1.00 52.27 O
ATOM 17 N3 U A 489 222.960 -71.624-100.735 1.00 38.59 N
ATOM 18 C4 U A 489 222.971 -71.024-101.980 1.00 45.55 C
ATOM 19 O4 U A 489 223.916 -70.305-102.343 1.00 52.03 O
ATOM 20 C5 U A 489 221.833 -71.324-102.787 1.00 43.73 C
ATOM 21 C6 U A 489 220.870 -72.125-102.338 1.00 37.94 C
ATOM 22 P G A 490 215.966 -70.865 -99.280 1.00 56.36 P
ATOM 23 OP1 G A 490 214.768 -71.212 -98.423 1.00 37.30 O
ATOM 24 OP2 G A 490 215.800 -69.878-100.375 1.00 62.32 O
ATOM 25 O5' G A 490 217.189 -70.438 -98.361 1.00 53.29 O
TER

ATOM 1 O3' U B 517 213.489 -81.068 -94.682 1.00114.30 O
ATOM 2 P A B 518 213.530 -79.807 -93.687 1.00 79.04 P
ATOM 3 OP1 A B 518 214.450 -80.158 -92.587 1.00 75.09 O
ATOM 4 OP2 A B 518 212.124 -79.448 -93.368 1.00 77.59 O
ATOM 5 O5' A B 518 214.176 -78.671 -94.576 1.00 60.83 O
ATOM 6 C5' A B 518 215.577 -78.605 -94.760 1.00 55.10 C
ATOM 7 C4' A B 518 215.939 -77.809 -95.989 1.00 40.86 C
ATOM 8 O4' A B 518 216.110 -76.408 -95.641 1.00 39.65 O
ATOM 9 C3' A B 518 217.245 -78.208 -96.652 1.00 38.19 C
ATOM 10 O3' A B 518 217.074 -79.270 -97.580 1.00 46.31 O
ATOM 11 C2' A B 518 217.748 -76.902 -97.279 1.00 34.43 C
ATOM 12 O2' A B 518 217.128 -76.656 -98.517 1.00 46.03 O
ATOM 13 C1' A B 518 217.244 -75.867 -96.296 1.00 39.16 C
ATOM 14 N9 A B 518 218.269 -75.551 -95.286 1.00 47.86 N
ATOM 15 C8 A B 518 218.357 -76.032 -94.003 1.00 48.59 C
ATOM 16 N7 A B 518 219.381 -75.584 -93.333 1.00 46.83 N
ATOM 17 C5 A B 518 220.012 -74.759 -94.243 1.00 40.12 C
ATOM 18 C6 A B 518 221.177 -73.978 -94.138 1.00 45.86 C
ATOM 19 N6 A B 518 221.942 -73.908 -93.027 1.00 45.20 N
ATOM 20 N1 A B 518 221.541 -73.269 -95.238 1.00 43.88 N
ATOM 21 C2 A B 518 220.782 -73.351 -96.340 1.00 40.46 C
ATOM 22 N3 A B 518 219.668 -74.050 -96.541 1.00 41.74 N
ATOM 23 C4 A B 518 219.344 -74.734 -95.444 1.00 37.92 C
ATOM 24 P G B 519 218.109 -80.504 -97.620 1.00 53.17 P
ATOM 25 OP1 G B 519 217.699 -81.374 -98.754 1.00 65.10 O
ATOM 26 OP2 G B 519 218.151 -81.084 -96.255 1.00 66.30 O
ATOM 27 O5' G B 519 219.494 -79.800 -97.954 1.00 36.27 O
TER

Atoms:
C4: (222.971,-71.024,-101.980)
N3: (222.960,-71.624,-100.735)
OP1: (216.825,-69.393,-104.502)
OP2: (219.075,-70.340,-105.315)
C2: (221.987,-72.451,-100.235)
C1': (219.775,-73.553,-100.753)
C3': (217.750,-72.321,-100.593)
O5': (217.929,-71.324,-103.299)
O4': (219.055,-73.778,-101.928)
C5': (217.312,-72.597,-103.111)
P: (217.743,-70.560,-104.686)
C4': (217.716,-73.240,-101.809)
C2': (218.818,-72.956,-99.716)
O2': (218.259,-74.027,-98.958)
N1: (220.904,-72.666,-101.087)
O4: (223.916,-70.305,-102.343)
O2: (222.087,-72.920,-99.106)
C6: (220.870,-72.125,-102.338)
C5: (221.833,-71.324,-102.787)
O3': (216.481,-72.243,-99.955)
OP1: (214.450,-80.158,-92.587)
OP2: (212.124,-79.448,-93.368)
C3': (217.245,-78.208,-96.652)
C1': (217.244,-75.867,-96.296)
C5': (215.577,-78.605,-94.760)
O4': (216.110,-76.408,-95.641)
C8: (218.357,-76.032,-94.003)
O2': (217.128,-76.656,-98.517)
C6: (221.177,-73.978,-94.138)
C5: (220.012,-74.759,-94.243)
C4: (219.344,-74.734,-95.444)
P: (213.530,-79.807,-93.687)
C4': (215.939,-77.809,-95.989)
C2': (217.748,-76.902,-97.279)
C2: (220.782,-73.351,-96.340)
N1: (221.541,-73.269,-95.238)
N3: (219.668,-74.050,-96.541)
N6: (221.942,-73.908,-93.027)
N7: (219.381,-75.584,-93.333)
N9: (218.269,-75.551,-95.286)
O5': (214.176,-78.671,-94.576)
O3': (217.074,-79.270,-97.580)
Image (generated by PyMOL):
PyMOL image
show in jmol