Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A1562:A1561
Extra
PDB:
ATOM 1 O3' U A1561 -37.421 -44.765 15.791 1.00 7.68 O
ATOM 2 P G A1562 -37.119 -43.719 14.617 1.00 26.40 P
ATOM 3 OP1 G A1562 -38.366 -42.934 14.415 1.00 22.61 O
ATOM 4 OP2 G A1562 -36.489 -44.404 13.466 1.00 22.61 O
ATOM 5 O5' G A1562 -35.998 -42.780 15.237 1.00 5.31 O
ATOM 6 C5' G A1562 -36.360 -41.674 16.072 1.00 5.31 C
ATOM 7 C4' G A1562 -35.178 -41.234 16.864 1.00 5.31 C
ATOM 8 O4' G A1562 -34.823 -42.300 17.766 1.00 5.31 O
ATOM 9 C3' G A1562 -33.925 -41.020 16.048 1.00 5.31 C
ATOM 10 O3' G A1562 -33.889 -39.745 15.444 1.00 5.31 O
ATOM 11 C2' G A1562 -32.836 -41.223 17.080 1.00 5.31 C
ATOM 12 O2' G A1562 -32.697 -40.113 17.942 1.00 5.31 O
ATOM 13 C1' G A1562 -33.418 -42.365 17.902 1.00 5.31 C
ATOM 14 N9 G A1562 -32.951 -43.676 17.447 1.00 26.02 N
ATOM 15 C8 G A1562 -33.682 -44.652 16.807 1.00 26.02 C
ATOM 16 N7 G A1562 -32.977 -45.717 16.531 1.00 26.02 N
ATOM 17 C5 G A1562 -31.707 -45.431 17.020 1.00 26.02 C
ATOM 18 C6 G A1562 -30.525 -46.206 17.015 1.00 26.02 C
ATOM 19 O6 G A1562 -30.362 -47.352 16.606 1.00 26.02 O
ATOM 20 N1 G A1562 -29.462 -45.521 17.570 1.00 26.02 N
ATOM 21 C2 G A1562 -29.526 -44.260 18.076 1.00 26.02 C
ATOM 22 N2 G A1562 -28.380 -43.748 18.499 1.00 26.02 N
ATOM 23 N3 G A1562 -30.625 -43.542 18.138 1.00 26.02 N
ATOM 24 C4 G A1562 -31.671 -44.178 17.582 1.00 26.02 C
ATOM 25 P G A1563 -33.042 -39.537 14.085 1.00 16.05 P
ATOM 26 OP1 G A1563 -33.303 -38.150 13.597 1.00 27.76 O
ATOM 27 OP2 G A1563 -33.313 -40.690 13.192 1.00 27.76 O
ATOM 28 O5' G A1563 -31.533 -39.642 14.580 1.00 6.45 O
TER
ATOM 1 O3' G B1560 -42.306 -46.864 12.923 1.00 6.60 O
ATOM 2 P U B1561 -40.919 -46.226 12.454 1.00 23.52 P
ATOM 3 OP1 U B1561 -41.066 -44.761 12.319 1.00 31.02 O
ATOM 4 OP2 U B1561 -40.441 -47.017 11.299 1.00 31.02 O
ATOM 5 O5' U B1561 -39.938 -46.521 13.666 1.00 7.68 O
ATOM 6 C5' U B1561 -40.241 -46.051 14.989 1.00 7.68 C
ATOM 7 C4' U B1561 -39.139 -46.431 15.945 1.00 7.68 C
ATOM 8 O4' U B1561 -39.138 -47.862 16.122 1.00 7.68 O
ATOM 9 C3' U B1561 -37.745 -46.092 15.461 1.00 7.68 C
ATOM 10 O3' U B1561 -37.421 -44.765 15.791 1.00 7.68 O
ATOM 11 C2' U B1561 -36.878 -47.114 16.173 1.00 7.68 C
ATOM 12 O2' U B1561 -36.604 -46.745 17.509 1.00 7.68 O
ATOM 13 C1' U B1561 -37.801 -48.329 16.197 1.00 7.68 C
ATOM 14 N1 U B1561 -37.573 -49.272 15.092 1.00 11.21 N
ATOM 15 C2 U B1561 -36.691 -50.303 15.295 1.00 11.21 C
ATOM 16 O2 U B1561 -36.084 -50.456 16.335 1.00 11.21 O
ATOM 17 N3 U B1561 -36.541 -51.159 14.241 1.00 11.21 N
ATOM 18 C4 U B1561 -37.166 -51.091 13.036 1.00 11.21 C
ATOM 19 O4 U B1561 -36.873 -51.899 12.156 1.00 11.21 O
ATOM 20 C5 U B1561 -38.066 -49.996 12.904 1.00 11.21 C
ATOM 21 C6 U B1561 -38.225 -49.142 13.911 1.00 11.21 C
ATOM 22 P G B1562 -37.119 -43.719 14.617 1.00 26.40 P
ATOM 23 OP1 G B1562 -38.366 -42.934 14.415 1.00 22.61 O
ATOM 24 OP2 G B1562 -36.489 -44.404 13.466 1.00 22.61 O
ATOM 25 O5' G B1562 -35.998 -42.780 15.237 1.00 5.31 O
TER
ATOM 2 P G A1562 -37.119 -43.719 14.617 1.00 26.40 P
ATOM 3 OP1 G A1562 -38.366 -42.934 14.415 1.00 22.61 O
ATOM 4 OP2 G A1562 -36.489 -44.404 13.466 1.00 22.61 O
ATOM 5 O5' G A1562 -35.998 -42.780 15.237 1.00 5.31 O
ATOM 6 C5' G A1562 -36.360 -41.674 16.072 1.00 5.31 C
ATOM 7 C4' G A1562 -35.178 -41.234 16.864 1.00 5.31 C
ATOM 8 O4' G A1562 -34.823 -42.300 17.766 1.00 5.31 O
ATOM 9 C3' G A1562 -33.925 -41.020 16.048 1.00 5.31 C
ATOM 10 O3' G A1562 -33.889 -39.745 15.444 1.00 5.31 O
ATOM 11 C2' G A1562 -32.836 -41.223 17.080 1.00 5.31 C
ATOM 12 O2' G A1562 -32.697 -40.113 17.942 1.00 5.31 O
ATOM 13 C1' G A1562 -33.418 -42.365 17.902 1.00 5.31 C
ATOM 14 N9 G A1562 -32.951 -43.676 17.447 1.00 26.02 N
ATOM 15 C8 G A1562 -33.682 -44.652 16.807 1.00 26.02 C
ATOM 16 N7 G A1562 -32.977 -45.717 16.531 1.00 26.02 N
ATOM 17 C5 G A1562 -31.707 -45.431 17.020 1.00 26.02 C
ATOM 18 C6 G A1562 -30.525 -46.206 17.015 1.00 26.02 C
ATOM 19 O6 G A1562 -30.362 -47.352 16.606 1.00 26.02 O
ATOM 20 N1 G A1562 -29.462 -45.521 17.570 1.00 26.02 N
ATOM 21 C2 G A1562 -29.526 -44.260 18.076 1.00 26.02 C
ATOM 22 N2 G A1562 -28.380 -43.748 18.499 1.00 26.02 N
ATOM 23 N3 G A1562 -30.625 -43.542 18.138 1.00 26.02 N
ATOM 24 C4 G A1562 -31.671 -44.178 17.582 1.00 26.02 C
ATOM 25 P G A1563 -33.042 -39.537 14.085 1.00 16.05 P
ATOM 26 OP1 G A1563 -33.303 -38.150 13.597 1.00 27.76 O
ATOM 27 OP2 G A1563 -33.313 -40.690 13.192 1.00 27.76 O
ATOM 28 O5' G A1563 -31.533 -39.642 14.580 1.00 6.45 O
TER
ATOM 1 O3' G B1560 -42.306 -46.864 12.923 1.00 6.60 O
ATOM 2 P U B1561 -40.919 -46.226 12.454 1.00 23.52 P
ATOM 3 OP1 U B1561 -41.066 -44.761 12.319 1.00 31.02 O
ATOM 4 OP2 U B1561 -40.441 -47.017 11.299 1.00 31.02 O
ATOM 5 O5' U B1561 -39.938 -46.521 13.666 1.00 7.68 O
ATOM 6 C5' U B1561 -40.241 -46.051 14.989 1.00 7.68 C
ATOM 7 C4' U B1561 -39.139 -46.431 15.945 1.00 7.68 C
ATOM 8 O4' U B1561 -39.138 -47.862 16.122 1.00 7.68 O
ATOM 9 C3' U B1561 -37.745 -46.092 15.461 1.00 7.68 C
ATOM 10 O3' U B1561 -37.421 -44.765 15.791 1.00 7.68 O
ATOM 11 C2' U B1561 -36.878 -47.114 16.173 1.00 7.68 C
ATOM 12 O2' U B1561 -36.604 -46.745 17.509 1.00 7.68 O
ATOM 13 C1' U B1561 -37.801 -48.329 16.197 1.00 7.68 C
ATOM 14 N1 U B1561 -37.573 -49.272 15.092 1.00 11.21 N
ATOM 15 C2 U B1561 -36.691 -50.303 15.295 1.00 11.21 C
ATOM 16 O2 U B1561 -36.084 -50.456 16.335 1.00 11.21 O
ATOM 17 N3 U B1561 -36.541 -51.159 14.241 1.00 11.21 N
ATOM 18 C4 U B1561 -37.166 -51.091 13.036 1.00 11.21 C
ATOM 19 O4 U B1561 -36.873 -51.899 12.156 1.00 11.21 O
ATOM 20 C5 U B1561 -38.066 -49.996 12.904 1.00 11.21 C
ATOM 21 C6 U B1561 -38.225 -49.142 13.911 1.00 11.21 C
ATOM 22 P G B1562 -37.119 -43.719 14.617 1.00 26.40 P
ATOM 23 OP1 G B1562 -38.366 -42.934 14.415 1.00 22.61 O
ATOM 24 OP2 G B1562 -36.489 -44.404 13.466 1.00 22.61 O
ATOM 25 O5' G B1562 -35.998 -42.780 15.237 1.00 5.31 O
TER
Atoms:
OP1: (-38.366,-42.934,14.415)
OP2: (-36.489,-44.404,13.466)
C3': (-33.925,-41.020,16.048)
C1': (-33.418,-42.365,17.902)
C5': (-36.360,-41.674,16.072)
O6: (-30.362,-47.352,16.606)
O4': (-34.823,-42.300,17.766)
C8: (-33.682,-44.652,16.807)
C2: (-29.526,-44.260,18.076)
C6: (-30.525,-46.206,17.015)
C5: (-31.707,-45.431,17.020)
C4: (-31.671,-44.178,17.582)
P: (-37.119,-43.719,14.617)
C4': (-35.178,-41.234,16.864)
C2': (-32.836,-41.223,17.080)
O2': (-32.697,-40.113,17.942)
N1: (-29.462,-45.521,17.570)
N2: (-28.380,-43.748,18.499)
N3: (-30.625,-43.542,18.138)
N7: (-32.977,-45.717,16.531)
N9: (-32.951,-43.676,17.447)
O5': (-35.998,-42.780,15.237)
O3': (-33.889,-39.745,15.444)
OP2: (-36.489,-44.404,13.466)
C3': (-33.925,-41.020,16.048)
C1': (-33.418,-42.365,17.902)
C5': (-36.360,-41.674,16.072)
O6: (-30.362,-47.352,16.606)
O4': (-34.823,-42.300,17.766)
C8: (-33.682,-44.652,16.807)
C2: (-29.526,-44.260,18.076)
C6: (-30.525,-46.206,17.015)
C5: (-31.707,-45.431,17.020)
C4: (-31.671,-44.178,17.582)
P: (-37.119,-43.719,14.617)
C4': (-35.178,-41.234,16.864)
C2': (-32.836,-41.223,17.080)
O2': (-32.697,-40.113,17.942)
N1: (-29.462,-45.521,17.570)
N2: (-28.380,-43.748,18.499)
N3: (-30.625,-43.542,18.138)
N7: (-32.977,-45.717,16.531)
N9: (-32.951,-43.676,17.447)
O5': (-35.998,-42.780,15.237)
O3': (-33.889,-39.745,15.444)
C4: (-37.166,-51.091,13.036)
N3: (-36.541,-51.159,14.241)
OP1: (-41.066,-44.761,12.319)
OP2: (-40.441,-47.017,11.299)
C2: (-36.691,-50.303,15.295)
C1': (-37.801,-48.329,16.197)
C3': (-37.745,-46.092,15.461)
O5': (-39.938,-46.521,13.666)
O4': (-39.138,-47.862,16.122)
C5': (-40.241,-46.051,14.989)
P: (-40.919,-46.226,12.454)
C4': (-39.139,-46.431,15.945)
C2': (-36.878,-47.114,16.173)
O2': (-36.604,-46.745,17.509)
N1: (-37.573,-49.272,15.092)
O4: (-36.873,-51.899,12.156)
O2: (-36.084,-50.456,16.335)
C6: (-38.225,-49.142,13.911)
C5: (-38.066,-49.996,12.904)
O3': (-37.421,-44.765,15.791)
N3: (-36.541,-51.159,14.241)
OP1: (-41.066,-44.761,12.319)
OP2: (-40.441,-47.017,11.299)
C2: (-36.691,-50.303,15.295)
C1': (-37.801,-48.329,16.197)
C3': (-37.745,-46.092,15.461)
O5': (-39.938,-46.521,13.666)
O4': (-39.138,-47.862,16.122)
C5': (-40.241,-46.051,14.989)
P: (-40.919,-46.226,12.454)
C4': (-39.139,-46.431,15.945)
C2': (-36.878,-47.114,16.173)
O2': (-36.604,-46.745,17.509)
N1: (-37.573,-49.272,15.092)
O4: (-36.873,-51.899,12.156)
O2: (-36.084,-50.456,16.335)
C6: (-38.225,-49.142,13.911)
C5: (-38.066,-49.996,12.904)
O3': (-37.421,-44.765,15.791)
Image (generated by PyMOL):