Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0690:0689
Extra
PDB:
ATOM 1 O3' U A 689 34.632 56.314 45.666 1.00 70.42 O
ATOM 2 P G A 690 34.193 54.884 45.086 1.00 70.45 P
ATOM 3 OP1 G A 690 35.248 54.461 44.123 1.00 68.39 O
ATOM 4 OP2 G A 690 32.777 54.967 44.635 1.00 69.35 O
ATOM 5 O5' G A 690 34.273 53.965 46.388 1.00 71.00 O
ATOM 6 C5' G A 690 34.651 52.582 46.304 1.00 72.17 C
ATOM 7 C4' G A 690 35.240 52.107 47.618 1.00 72.40 C
ATOM 8 O4' G A 690 36.550 52.700 47.838 1.00 72.76 O
ATOM 9 C3' G A 690 34.486 52.458 48.888 1.00 71.43 C
ATOM 10 O3' G A 690 33.337 51.654 49.094 1.00 69.72 O
ATOM 11 C2' G A 690 35.557 52.236 49.948 1.00 72.25 C
ATOM 12 O2' G A 690 35.773 50.877 50.272 1.00 72.03 O
ATOM 13 C1' G A 690 36.793 52.792 49.237 1.00 73.14 C
ATOM 14 N9 G A 690 37.003 54.191 49.596 1.00 74.45 N
ATOM 15 C8 G A 690 36.843 55.303 48.803 1.00 74.61 C
ATOM 16 N7 G A 690 37.056 56.421 49.442 1.00 74.93 N
ATOM 17 C5 G A 690 37.387 56.023 50.730 1.00 75.58 C
ATOM 18 C6 G A 690 37.708 56.792 51.880 1.00 76.52 C
ATOM 19 O6 G A 690 37.760 58.026 51.996 1.00 77.11 O
ATOM 20 N1 G A 690 37.980 55.978 52.978 1.00 76.10 N
ATOM 21 C2 G A 690 37.940 54.607 52.976 1.00 74.74 C
ATOM 22 N2 G A 690 38.219 54.001 54.135 1.00 73.91 N
ATOM 23 N3 G A 690 37.641 53.883 51.915 1.00 74.91 N
ATOM 24 C4 G A 690 37.375 54.650 50.836 1.00 75.16 C
ATOM 25 P G A 691 32.125 52.223 49.985 1.00 70.00 P
ATOM 26 OP1 G A 691 30.966 51.334 49.769 1.00 71.30 O
ATOM 27 OP2 G A 691 31.980 53.683 49.755 1.00 69.83 O
ATOM 28 O5' G A 691 32.622 51.992 51.477 1.00 69.18 O
TER
ATOM 1 O3' A B 688 33.406 61.683 41.936 1.00 57.08 O
ATOM 2 P U B 689 33.390 60.145 42.378 1.00 56.67 P
ATOM 3 OP1 U B 689 33.738 59.332 41.183 1.00 56.71 O
ATOM 4 OP2 U B 689 32.115 59.899 43.082 1.00 58.39 O
ATOM 5 O5' U B 689 34.568 60.052 43.441 1.00 58.05 O
ATOM 6 C5' U B 689 35.580 59.041 43.343 1.00 62.02 C
ATOM 7 C4' U B 689 35.609 58.221 44.609 1.00 66.12 C
ATOM 8 O4' U B 689 35.896 59.095 45.737 1.00 67.57 O
ATOM 9 C3' U B 689 34.308 57.503 44.960 1.00 68.09 C
ATOM 10 O3' U B 689 34.632 56.314 45.666 1.00 70.42 O
ATOM 11 C2' U B 689 33.634 58.482 45.916 1.00 68.21 C
ATOM 12 O2' U B 689 32.728 57.860 46.806 1.00 67.95 O
ATOM 13 C1' U B 689 34.841 59.029 46.677 1.00 67.84 C
ATOM 14 N1 U B 689 34.651 60.372 47.249 1.00 68.33 N
ATOM 15 C2 U B 689 34.930 60.543 48.595 1.00 68.33 C
ATOM 16 O2 U B 689 35.293 59.635 49.322 1.00 67.69 O
ATOM 17 N3 U B 689 34.771 61.824 49.061 1.00 68.99 N
ATOM 18 C4 U B 689 34.372 62.929 48.338 1.00 69.20 C
ATOM 19 O4 U B 689 34.393 64.037 48.873 1.00 68.74 O
ATOM 20 C5 U B 689 34.078 62.666 46.960 1.00 69.20 C
ATOM 21 C6 U B 689 34.223 61.430 46.474 1.00 68.46 C
ATOM 22 P G B 690 34.193 54.884 45.086 1.00 70.45 P
ATOM 23 OP1 G B 690 35.248 54.461 44.123 1.00 68.39 O
ATOM 24 OP2 G B 690 32.777 54.967 44.635 1.00 69.35 O
ATOM 25 O5' G B 690 34.273 53.965 46.388 1.00 71.00 O
TER
ATOM 2 P G A 690 34.193 54.884 45.086 1.00 70.45 P
ATOM 3 OP1 G A 690 35.248 54.461 44.123 1.00 68.39 O
ATOM 4 OP2 G A 690 32.777 54.967 44.635 1.00 69.35 O
ATOM 5 O5' G A 690 34.273 53.965 46.388 1.00 71.00 O
ATOM 6 C5' G A 690 34.651 52.582 46.304 1.00 72.17 C
ATOM 7 C4' G A 690 35.240 52.107 47.618 1.00 72.40 C
ATOM 8 O4' G A 690 36.550 52.700 47.838 1.00 72.76 O
ATOM 9 C3' G A 690 34.486 52.458 48.888 1.00 71.43 C
ATOM 10 O3' G A 690 33.337 51.654 49.094 1.00 69.72 O
ATOM 11 C2' G A 690 35.557 52.236 49.948 1.00 72.25 C
ATOM 12 O2' G A 690 35.773 50.877 50.272 1.00 72.03 O
ATOM 13 C1' G A 690 36.793 52.792 49.237 1.00 73.14 C
ATOM 14 N9 G A 690 37.003 54.191 49.596 1.00 74.45 N
ATOM 15 C8 G A 690 36.843 55.303 48.803 1.00 74.61 C
ATOM 16 N7 G A 690 37.056 56.421 49.442 1.00 74.93 N
ATOM 17 C5 G A 690 37.387 56.023 50.730 1.00 75.58 C
ATOM 18 C6 G A 690 37.708 56.792 51.880 1.00 76.52 C
ATOM 19 O6 G A 690 37.760 58.026 51.996 1.00 77.11 O
ATOM 20 N1 G A 690 37.980 55.978 52.978 1.00 76.10 N
ATOM 21 C2 G A 690 37.940 54.607 52.976 1.00 74.74 C
ATOM 22 N2 G A 690 38.219 54.001 54.135 1.00 73.91 N
ATOM 23 N3 G A 690 37.641 53.883 51.915 1.00 74.91 N
ATOM 24 C4 G A 690 37.375 54.650 50.836 1.00 75.16 C
ATOM 25 P G A 691 32.125 52.223 49.985 1.00 70.00 P
ATOM 26 OP1 G A 691 30.966 51.334 49.769 1.00 71.30 O
ATOM 27 OP2 G A 691 31.980 53.683 49.755 1.00 69.83 O
ATOM 28 O5' G A 691 32.622 51.992 51.477 1.00 69.18 O
TER
ATOM 1 O3' A B 688 33.406 61.683 41.936 1.00 57.08 O
ATOM 2 P U B 689 33.390 60.145 42.378 1.00 56.67 P
ATOM 3 OP1 U B 689 33.738 59.332 41.183 1.00 56.71 O
ATOM 4 OP2 U B 689 32.115 59.899 43.082 1.00 58.39 O
ATOM 5 O5' U B 689 34.568 60.052 43.441 1.00 58.05 O
ATOM 6 C5' U B 689 35.580 59.041 43.343 1.00 62.02 C
ATOM 7 C4' U B 689 35.609 58.221 44.609 1.00 66.12 C
ATOM 8 O4' U B 689 35.896 59.095 45.737 1.00 67.57 O
ATOM 9 C3' U B 689 34.308 57.503 44.960 1.00 68.09 C
ATOM 10 O3' U B 689 34.632 56.314 45.666 1.00 70.42 O
ATOM 11 C2' U B 689 33.634 58.482 45.916 1.00 68.21 C
ATOM 12 O2' U B 689 32.728 57.860 46.806 1.00 67.95 O
ATOM 13 C1' U B 689 34.841 59.029 46.677 1.00 67.84 C
ATOM 14 N1 U B 689 34.651 60.372 47.249 1.00 68.33 N
ATOM 15 C2 U B 689 34.930 60.543 48.595 1.00 68.33 C
ATOM 16 O2 U B 689 35.293 59.635 49.322 1.00 67.69 O
ATOM 17 N3 U B 689 34.771 61.824 49.061 1.00 68.99 N
ATOM 18 C4 U B 689 34.372 62.929 48.338 1.00 69.20 C
ATOM 19 O4 U B 689 34.393 64.037 48.873 1.00 68.74 O
ATOM 20 C5 U B 689 34.078 62.666 46.960 1.00 69.20 C
ATOM 21 C6 U B 689 34.223 61.430 46.474 1.00 68.46 C
ATOM 22 P G B 690 34.193 54.884 45.086 1.00 70.45 P
ATOM 23 OP1 G B 690 35.248 54.461 44.123 1.00 68.39 O
ATOM 24 OP2 G B 690 32.777 54.967 44.635 1.00 69.35 O
ATOM 25 O5' G B 690 34.273 53.965 46.388 1.00 71.00 O
TER
Atoms:
OP1: (35.248,54.461,44.123)
OP2: (32.777,54.967,44.635)
C3': (34.486,52.458,48.888)
C1': (36.793,52.792,49.237)
C5': (34.651,52.582,46.304)
O6: (37.760,58.026,51.996)
O4': (36.550,52.700,47.838)
C8: (36.843,55.303,48.803)
C2: (37.940,54.607,52.976)
C6: (37.708,56.792,51.880)
C5: (37.387,56.023,50.730)
C4: (37.375,54.650,50.836)
P: (34.193,54.884,45.086)
C4': (35.240,52.107,47.618)
C2': (35.557,52.236,49.948)
O2': (35.773,50.877,50.272)
N1: (37.980,55.978,52.978)
N2: (38.219,54.001,54.135)
N3: (37.641,53.883,51.915)
N7: (37.056,56.421,49.442)
N9: (37.003,54.191,49.596)
O5': (34.273,53.965,46.388)
O3': (33.337,51.654,49.094)
OP2: (32.777,54.967,44.635)
C3': (34.486,52.458,48.888)
C1': (36.793,52.792,49.237)
C5': (34.651,52.582,46.304)
O6: (37.760,58.026,51.996)
O4': (36.550,52.700,47.838)
C8: (36.843,55.303,48.803)
C2: (37.940,54.607,52.976)
C6: (37.708,56.792,51.880)
C5: (37.387,56.023,50.730)
C4: (37.375,54.650,50.836)
P: (34.193,54.884,45.086)
C4': (35.240,52.107,47.618)
C2': (35.557,52.236,49.948)
O2': (35.773,50.877,50.272)
N1: (37.980,55.978,52.978)
N2: (38.219,54.001,54.135)
N3: (37.641,53.883,51.915)
N7: (37.056,56.421,49.442)
N9: (37.003,54.191,49.596)
O5': (34.273,53.965,46.388)
O3': (33.337,51.654,49.094)
C4: (34.372,62.929,48.338)
N3: (34.771,61.824,49.061)
OP1: (33.738,59.332,41.183)
OP2: (32.115,59.899,43.082)
C2: (34.930,60.543,48.595)
C1': (34.841,59.029,46.677)
C3': (34.308,57.503,44.960)
O5': (34.568,60.052,43.441)
O4': (35.896,59.095,45.737)
C5': (35.580,59.041,43.343)
P: (33.390,60.145,42.378)
C4': (35.609,58.221,44.609)
C2': (33.634,58.482,45.916)
O2': (32.728,57.860,46.806)
N1: (34.651,60.372,47.249)
O4: (34.393,64.037,48.873)
O2: (35.293,59.635,49.322)
C6: (34.223,61.430,46.474)
C5: (34.078,62.666,46.960)
O3': (34.632,56.314,45.666)
N3: (34.771,61.824,49.061)
OP1: (33.738,59.332,41.183)
OP2: (32.115,59.899,43.082)
C2: (34.930,60.543,48.595)
C1': (34.841,59.029,46.677)
C3': (34.308,57.503,44.960)
O5': (34.568,60.052,43.441)
O4': (35.896,59.095,45.737)
C5': (35.580,59.041,43.343)
P: (33.390,60.145,42.378)
C4': (35.609,58.221,44.609)
C2': (33.634,58.482,45.916)
O2': (32.728,57.860,46.806)
N1: (34.651,60.372,47.249)
O4: (34.393,64.037,48.873)
O2: (35.293,59.635,49.322)
C6: (34.223,61.430,46.474)
C5: (34.078,62.666,46.960)
O3': (34.632,56.314,45.666)
Image (generated by PyMOL):