Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2CKY:A12:A11
Extra
PDB:
ATOM 1 O3' U A 11 6.297 19.887 -45.766 1.00 35.36 O
ATOM 2 P G A 12 5.831 21.401 -45.670 1.00 35.55 P
ATOM 3 OP1 G A 12 4.708 21.644 -46.628 1.00 34.33 O
ATOM 4 OP2 G A 12 7.089 22.173 -45.710 1.00 37.53 O
ATOM 5 O5' G A 12 5.233 21.458 -44.206 1.00 33.07 O
ATOM 6 C5' G A 12 3.930 20.922 -44.170 1.00 33.65 C
ATOM 7 C4' G A 12 3.736 20.109 -42.931 1.00 32.58 C
ATOM 8 O4' G A 12 4.464 18.879 -43.007 1.00 30.66 O
ATOM 9 C3' G A 12 4.311 20.768 -41.699 1.00 33.74 C
ATOM 10 O3' G A 12 3.513 21.873 -41.319 1.00 34.61 O
ATOM 11 C2' G A 12 4.186 19.570 -40.791 1.00 32.80 C
ATOM 12 O2' G A 12 2.808 19.358 -40.518 1.00 34.54 O
ATOM 13 C1' G A 12 4.802 18.501 -41.694 1.00 31.20 C
ATOM 14 N9 G A 12 6.249 18.325 -41.677 1.00 30.75 N
ATOM 15 C8 G A 12 7.158 18.645 -42.660 1.00 31.49 C
ATOM 16 N7 G A 12 8.396 18.358 -42.363 1.00 30.90 N
ATOM 17 C5 G A 12 8.292 17.789 -41.122 1.00 30.45 C
ATOM 18 C6 G A 12 9.304 17.261 -40.315 1.00 32.12 C
ATOM 19 O6 G A 12 10.515 17.216 -40.575 1.00 33.36 O
ATOM 20 N1 G A 12 8.819 16.783 -39.098 1.00 31.74 N
ATOM 21 C2 G A 12 7.491 16.789 -38.757 1.00 31.15 C
ATOM 22 N2 G A 12 7.215 16.274 -37.553 1.00 31.70 N
ATOM 23 N3 G A 12 6.513 17.273 -39.511 1.00 31.28 N
ATOM 24 C4 G A 12 6.993 17.753 -40.683 1.00 30.74 C
ATOM 25 P C A 13 4.066 22.957 -40.284 1.00 37.47 P
ATOM 26 OP1 C A 13 2.838 23.753 -39.972 1.00 36.75 O
ATOM 27 OP2 C A 13 5.316 23.555 -40.827 1.00 36.85 O
ATOM 28 O5' C A 13 4.574 22.169 -38.988 1.00 33.35 O
TER
ATOM 1 O3' G B 10 1.798 16.580 -48.567 1.00 31.79 O
ATOM 2 P U B 11 2.084 18.137 -48.454 1.00 32.30 P
ATOM 3 OP1 U B 11 1.401 18.601 -47.233 1.00 33.02 O
ATOM 4 OP2 U B 11 1.826 18.769 -49.763 1.00 32.71 O
ATOM 5 O5' U B 11 3.627 18.150 -48.092 1.00 32.06 O
ATOM 6 C5' U B 11 3.961 18.011 -46.754 1.00 31.03 C
ATOM 7 C4' U B 11 5.451 17.893 -46.664 1.00 32.12 C
ATOM 8 O4' U B 11 5.886 16.986 -47.667 1.00 32.08 O
ATOM 9 C3' U B 11 6.218 19.155 -46.980 1.00 33.83 C
ATOM 10 O3' U B 11 6.297 19.887 -45.766 1.00 35.36 O
ATOM 11 C2' U B 11 7.577 18.637 -47.428 1.00 34.14 C
ATOM 12 O2' U B 11 8.487 18.442 -46.348 1.00 36.63 O
ATOM 13 C1' U B 11 7.220 17.290 -47.996 1.00 33.08 C
ATOM 14 N1 U B 11 7.293 17.179 -49.442 1.00 33.45 N
ATOM 15 C2 U B 11 8.384 16.546 -49.983 1.00 33.80 C
ATOM 16 O2 U B 11 9.293 16.117 -49.307 1.00 33.40 O
ATOM 17 N3 U B 11 8.377 16.433 -51.352 1.00 35.41 N
ATOM 18 C4 U B 11 7.390 16.886 -52.208 1.00 35.61 C
ATOM 19 O4 U B 11 7.530 16.713 -53.415 1.00 36.17 O
ATOM 20 C5 U B 11 6.262 17.530 -51.566 1.00 35.16 C
ATOM 21 C6 U B 11 6.248 17.643 -50.227 1.00 34.47 C
ATOM 22 P G B 12 5.831 21.401 -45.670 1.00 35.55 P
ATOM 23 OP1 G B 12 4.708 21.644 -46.628 1.00 34.33 O
ATOM 24 OP2 G B 12 7.089 22.173 -45.710 1.00 37.53 O
ATOM 25 O5' G B 12 5.233 21.458 -44.206 1.00 33.07 O
TER
ATOM 2 P G A 12 5.831 21.401 -45.670 1.00 35.55 P
ATOM 3 OP1 G A 12 4.708 21.644 -46.628 1.00 34.33 O
ATOM 4 OP2 G A 12 7.089 22.173 -45.710 1.00 37.53 O
ATOM 5 O5' G A 12 5.233 21.458 -44.206 1.00 33.07 O
ATOM 6 C5' G A 12 3.930 20.922 -44.170 1.00 33.65 C
ATOM 7 C4' G A 12 3.736 20.109 -42.931 1.00 32.58 C
ATOM 8 O4' G A 12 4.464 18.879 -43.007 1.00 30.66 O
ATOM 9 C3' G A 12 4.311 20.768 -41.699 1.00 33.74 C
ATOM 10 O3' G A 12 3.513 21.873 -41.319 1.00 34.61 O
ATOM 11 C2' G A 12 4.186 19.570 -40.791 1.00 32.80 C
ATOM 12 O2' G A 12 2.808 19.358 -40.518 1.00 34.54 O
ATOM 13 C1' G A 12 4.802 18.501 -41.694 1.00 31.20 C
ATOM 14 N9 G A 12 6.249 18.325 -41.677 1.00 30.75 N
ATOM 15 C8 G A 12 7.158 18.645 -42.660 1.00 31.49 C
ATOM 16 N7 G A 12 8.396 18.358 -42.363 1.00 30.90 N
ATOM 17 C5 G A 12 8.292 17.789 -41.122 1.00 30.45 C
ATOM 18 C6 G A 12 9.304 17.261 -40.315 1.00 32.12 C
ATOM 19 O6 G A 12 10.515 17.216 -40.575 1.00 33.36 O
ATOM 20 N1 G A 12 8.819 16.783 -39.098 1.00 31.74 N
ATOM 21 C2 G A 12 7.491 16.789 -38.757 1.00 31.15 C
ATOM 22 N2 G A 12 7.215 16.274 -37.553 1.00 31.70 N
ATOM 23 N3 G A 12 6.513 17.273 -39.511 1.00 31.28 N
ATOM 24 C4 G A 12 6.993 17.753 -40.683 1.00 30.74 C
ATOM 25 P C A 13 4.066 22.957 -40.284 1.00 37.47 P
ATOM 26 OP1 C A 13 2.838 23.753 -39.972 1.00 36.75 O
ATOM 27 OP2 C A 13 5.316 23.555 -40.827 1.00 36.85 O
ATOM 28 O5' C A 13 4.574 22.169 -38.988 1.00 33.35 O
TER
ATOM 1 O3' G B 10 1.798 16.580 -48.567 1.00 31.79 O
ATOM 2 P U B 11 2.084 18.137 -48.454 1.00 32.30 P
ATOM 3 OP1 U B 11 1.401 18.601 -47.233 1.00 33.02 O
ATOM 4 OP2 U B 11 1.826 18.769 -49.763 1.00 32.71 O
ATOM 5 O5' U B 11 3.627 18.150 -48.092 1.00 32.06 O
ATOM 6 C5' U B 11 3.961 18.011 -46.754 1.00 31.03 C
ATOM 7 C4' U B 11 5.451 17.893 -46.664 1.00 32.12 C
ATOM 8 O4' U B 11 5.886 16.986 -47.667 1.00 32.08 O
ATOM 9 C3' U B 11 6.218 19.155 -46.980 1.00 33.83 C
ATOM 10 O3' U B 11 6.297 19.887 -45.766 1.00 35.36 O
ATOM 11 C2' U B 11 7.577 18.637 -47.428 1.00 34.14 C
ATOM 12 O2' U B 11 8.487 18.442 -46.348 1.00 36.63 O
ATOM 13 C1' U B 11 7.220 17.290 -47.996 1.00 33.08 C
ATOM 14 N1 U B 11 7.293 17.179 -49.442 1.00 33.45 N
ATOM 15 C2 U B 11 8.384 16.546 -49.983 1.00 33.80 C
ATOM 16 O2 U B 11 9.293 16.117 -49.307 1.00 33.40 O
ATOM 17 N3 U B 11 8.377 16.433 -51.352 1.00 35.41 N
ATOM 18 C4 U B 11 7.390 16.886 -52.208 1.00 35.61 C
ATOM 19 O4 U B 11 7.530 16.713 -53.415 1.00 36.17 O
ATOM 20 C5 U B 11 6.262 17.530 -51.566 1.00 35.16 C
ATOM 21 C6 U B 11 6.248 17.643 -50.227 1.00 34.47 C
ATOM 22 P G B 12 5.831 21.401 -45.670 1.00 35.55 P
ATOM 23 OP1 G B 12 4.708 21.644 -46.628 1.00 34.33 O
ATOM 24 OP2 G B 12 7.089 22.173 -45.710 1.00 37.53 O
ATOM 25 O5' G B 12 5.233 21.458 -44.206 1.00 33.07 O
TER
Atoms:
OP1: (4.708,21.644,-46.628)
OP2: (7.089,22.173,-45.710)
C3': (4.311,20.768,-41.699)
C1': (4.802,18.501,-41.694)
C5': (3.930,20.922,-44.170)
O6: (10.515,17.216,-40.575)
O4': (4.464,18.879,-43.007)
C8: (7.158,18.645,-42.660)
C2: (7.491,16.789,-38.757)
C6: (9.304,17.261,-40.315)
C5: (8.292,17.789,-41.122)
C4: (6.993,17.753,-40.683)
P: (5.831,21.401,-45.670)
C4': (3.736,20.109,-42.931)
C2': (4.186,19.570,-40.791)
O2': (2.808,19.358,-40.518)
N1: (8.819,16.783,-39.098)
N2: (7.215,16.274,-37.553)
N3: (6.513,17.273,-39.511)
N7: (8.396,18.358,-42.363)
N9: (6.249,18.325,-41.677)
O5': (5.233,21.458,-44.206)
O3': (3.513,21.873,-41.319)
OP2: (7.089,22.173,-45.710)
C3': (4.311,20.768,-41.699)
C1': (4.802,18.501,-41.694)
C5': (3.930,20.922,-44.170)
O6: (10.515,17.216,-40.575)
O4': (4.464,18.879,-43.007)
C8: (7.158,18.645,-42.660)
C2: (7.491,16.789,-38.757)
C6: (9.304,17.261,-40.315)
C5: (8.292,17.789,-41.122)
C4: (6.993,17.753,-40.683)
P: (5.831,21.401,-45.670)
C4': (3.736,20.109,-42.931)
C2': (4.186,19.570,-40.791)
O2': (2.808,19.358,-40.518)
N1: (8.819,16.783,-39.098)
N2: (7.215,16.274,-37.553)
N3: (6.513,17.273,-39.511)
N7: (8.396,18.358,-42.363)
N9: (6.249,18.325,-41.677)
O5': (5.233,21.458,-44.206)
O3': (3.513,21.873,-41.319)
C4: (7.390,16.886,-52.208)
N3: (8.377,16.433,-51.352)
OP1: (1.401,18.601,-47.233)
OP2: (1.826,18.769,-49.763)
C2: (8.384,16.546,-49.983)
C1': (7.220,17.290,-47.996)
C3': (6.218,19.155,-46.980)
O5': (3.627,18.150,-48.092)
O4': (5.886,16.986,-47.667)
C5': (3.961,18.011,-46.754)
P: (2.084,18.137,-48.454)
C4': (5.451,17.893,-46.664)
C2': (7.577,18.637,-47.428)
O2': (8.487,18.442,-46.348)
N1: (7.293,17.179,-49.442)
O4: (7.530,16.713,-53.415)
O2: (9.293,16.117,-49.307)
C6: (6.248,17.643,-50.227)
C5: (6.262,17.530,-51.566)
O3': (6.297,19.887,-45.766)
N3: (8.377,16.433,-51.352)
OP1: (1.401,18.601,-47.233)
OP2: (1.826,18.769,-49.763)
C2: (8.384,16.546,-49.983)
C1': (7.220,17.290,-47.996)
C3': (6.218,19.155,-46.980)
O5': (3.627,18.150,-48.092)
O4': (5.886,16.986,-47.667)
C5': (3.961,18.011,-46.754)
P: (2.084,18.137,-48.454)
C4': (5.451,17.893,-46.664)
C2': (7.577,18.637,-47.428)
O2': (8.487,18.442,-46.348)
N1: (7.293,17.179,-49.442)
O4: (7.530,16.713,-53.415)
O2: (9.293,16.117,-49.307)
C6: (6.248,17.643,-50.227)
C5: (6.262,17.530,-51.566)
O3': (6.297,19.887,-45.766)
Image (generated by PyMOL):