ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:982:981

Extra

PDB:
ATOM 1 O3' U A 81 44.130 73.608 109.514 1.00 37.01 O
ATOM 2 P G A 82 43.395 74.914 108.946 1.00 37.82 P
ATOM 3 OP1 G A 82 44.356 75.552 108.018 1.00 37.36 O
ATOM 4 OP2 G A 82 42.827 75.697 110.069 1.00 38.12 O
ATOM 5 O5' G A 82 42.177 74.341 108.099 1.00 38.31 O
ATOM 6 C5' G A 82 42.284 74.142 106.682 1.00 37.68 C
ATOM 7 C4' G A 82 40.911 73.952 106.078 1.00 38.79 C
ATOM 8 O4' G A 82 40.299 72.764 106.647 1.00 39.03 O
ATOM 9 C3' G A 82 39.900 75.053 106.355 1.00 37.79 C
ATOM 10 O3' G A 82 40.025 76.158 105.473 1.00 39.10 O
ATOM 11 C2' G A 82 38.577 74.326 106.170 1.00 37.20 C
ATOM 12 O2' G A 82 38.215 74.171 104.811 1.00 35.97 O
ATOM 13 C1' G A 82 38.902 72.970 106.800 1.00 37.64 C
ATOM 14 N9 G A 82 38.608 72.984 108.228 1.00 37.76 N
ATOM 15 C8 G A 82 39.509 72.924 109.263 1.00 36.39 C
ATOM 16 N7 G A 82 38.949 73.037 110.435 1.00 37.87 N
ATOM 17 C5 G A 82 37.593 73.167 110.159 1.00 38.32 C
ATOM 18 C6 G A 82 36.483 73.343 111.035 1.00 38.04 C
ATOM 19 O6 G A 82 36.483 73.469 112.271 1.00 37.93 O
ATOM 20 N1 G A 82 35.282 73.389 110.333 1.00 37.62 N
ATOM 21 C2 G A 82 35.160 73.298 108.964 1.00 38.73 C
ATOM 22 N2 G A 82 33.908 73.346 108.467 1.00 37.45 N
ATOM 23 N3 G A 82 36.187 73.166 108.141 1.00 38.81 N
ATOM 24 C4 G A 82 37.364 73.105 108.803 1.00 38.38 C
ATOM 25 P G A 83 39.539 77.612 105.954 1.00 40.99 P
ATOM 26 OP1 G A 83 39.714 78.560 104.828 1.00 42.16 O
ATOM 27 OP2 G A 83 40.189 77.894 107.265 1.00 42.03 O
ATOM 28 O5' G A 83 37.980 77.441 106.211 1.00 40.67 O
TER

ATOM 1 O3' C B 80 47.661 72.937 114.458 1.00 38.41 O
ATOM 2 P U B 81 46.696 74.153 114.059 1.00 37.04 P
ATOM 3 OP1 U B 81 47.521 75.135 113.316 1.00 38.90 O
ATOM 4 OP2 U B 81 45.943 74.588 115.259 1.00 37.64 O
ATOM 5 O5' U B 81 45.647 73.499 113.061 1.00 37.61 O
ATOM 6 C5' U B 81 46.074 72.771 111.900 1.00 38.31 C
ATOM 7 C4' U B 81 44.883 72.126 111.241 1.00 39.59 C
ATOM 8 O4' U B 81 44.221 71.260 112.200 1.00 39.99 O
ATOM 9 C3' U B 81 43.801 73.100 110.805 1.00 38.88 C
ATOM 10 O3' U B 81 44.130 73.608 109.514 1.00 37.01 O
ATOM 11 C2' U B 81 42.548 72.231 110.795 1.00 39.58 C
ATOM 12 O2' U B 81 42.409 71.490 109.605 1.00 41.48 O
ATOM 13 C1' U B 81 42.827 71.262 111.951 1.00 40.10 C
ATOM 14 N1 U B 81 42.115 71.543 113.207 1.00 40.22 N
ATOM 15 C2 U B 81 40.786 71.167 113.291 1.00 39.76 C
ATOM 16 O2 U B 81 40.199 70.609 112.384 1.00 39.34 O
ATOM 17 N3 U B 81 40.170 71.465 114.480 1.00 39.95 N
ATOM 18 C4 U B 81 40.735 72.081 115.576 1.00 41.06 C
ATOM 19 O4 U B 81 40.043 72.308 116.566 1.00 41.40 O
ATOM 20 C5 U B 81 42.112 72.431 115.419 1.00 43.03 C
ATOM 21 C6 U B 81 42.740 72.158 114.266 1.00 42.07 C
ATOM 22 P G B 82 43.395 74.914 108.946 1.00 37.82 P
ATOM 23 OP1 G B 82 44.356 75.552 108.018 1.00 37.36 O
ATOM 24 OP2 G B 82 42.827 75.697 110.069 1.00 38.12 O
ATOM 25 O5' G B 82 42.177 74.341 108.099 1.00 38.31 O
TER

Atoms:
OP1: (44.356,75.552,108.018)
OP2: (42.827,75.697,110.069)
C3': (39.900,75.053,106.355)
C1': (38.902,72.970,106.800)
C5': (42.284,74.142,106.682)
O6: (36.483,73.469,112.271)
O4': (40.299,72.764,106.647)
C8: (39.509,72.924,109.263)
C2: (35.160,73.298,108.964)
C6: (36.483,73.343,111.035)
C5: (37.593,73.167,110.159)
C4: (37.364,73.105,108.803)
P: (43.395,74.914,108.946)
C4': (40.911,73.952,106.078)
C2': (38.577,74.326,106.170)
O2': (38.215,74.171,104.811)
N1: (35.282,73.389,110.333)
N2: (33.908,73.346,108.467)
N3: (36.187,73.166,108.141)
N7: (38.949,73.037,110.435)
N9: (38.608,72.984,108.228)
O5': (42.177,74.341,108.099)
O3': (40.025,76.158,105.473)
C4: (40.735,72.081,115.576)
N3: (40.170,71.465,114.480)
OP1: (47.521,75.135,113.316)
OP2: (45.943,74.588,115.259)
C2: (40.786,71.167,113.291)
C1': (42.827,71.262,111.951)
C3': (43.801,73.100,110.805)
O5': (45.647,73.499,113.061)
O4': (44.221,71.260,112.200)
C5': (46.074,72.771,111.900)
P: (46.696,74.153,114.059)
C4': (44.883,72.126,111.241)
C2': (42.548,72.231,110.795)
O2': (42.409,71.490,109.605)
N1: (42.115,71.543,113.207)
O4: (40.043,72.308,116.566)
O2: (40.199,70.609,112.384)
C6: (42.740,72.158,114.266)
C5: (42.112,72.431,115.419)
O3': (44.130,73.608,109.514)
Image (generated by PyMOL):
PyMOL image
show in jmol