Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1U8D:A46:A50
Extra
PDB:
ATOM 1 O3' C A 45 44.971 7.328 6.520 1.00 15.95 O
ATOM 2 P C A 46 46.349 7.925 7.060 1.00 17.42 P
ATOM 3 OP1 C A 46 47.356 7.713 5.977 1.00 20.07 O
ATOM 4 OP2 C A 46 46.636 7.464 8.434 1.00 19.05 O
ATOM 5 O5' C A 46 46.133 9.494 7.201 1.00 17.65 O
ATOM 6 C5' C A 46 45.764 10.291 6.081 1.00 17.42 C
ATOM 7 C4' C A 46 45.277 11.640 6.565 1.00 16.64 C
ATOM 8 O4' C A 46 44.139 11.438 7.426 1.00 14.79 O
ATOM 9 C3' C A 46 46.263 12.391 7.446 1.00 17.63 C
ATOM 10 O3' C A 46 47.139 13.091 6.584 1.00 20.87 O
ATOM 11 C2' C A 46 45.331 13.335 8.203 1.00 16.43 C
ATOM 12 O2' C A 46 44.852 14.369 7.365 1.00 14.86 O
ATOM 13 C1' C A 46 44.138 12.417 8.454 1.00 13.94 C
ATOM 14 N1 C A 46 44.153 11.729 9.750 1.00 13.10 N
ATOM 15 C2 C A 46 43.580 12.368 10.847 1.00 12.09 C
ATOM 16 O2 C A 46 43.175 13.525 10.710 1.00 13.24 O
ATOM 17 N3 C A 46 43.489 11.711 12.021 1.00 11.67 N
ATOM 18 C4 C A 46 43.975 10.468 12.138 1.00 12.40 C
ATOM 19 N4 C A 46 43.831 9.835 13.322 1.00 12.14 N
ATOM 20 C5 C A 46 44.626 9.812 11.054 1.00 12.01 C
ATOM 21 C6 C A 46 44.688 10.474 9.885 1.00 12.81 C
ATOM 22 P G A 47 48.728 12.846 6.660 1.00 24.16 P
ATOM 23 OP1 G A 47 49.270 13.445 5.410 1.00 23.67 O
ATOM 24 OP2 G A 47 48.943 11.426 6.942 1.00 23.26 O
ATOM 25 O5' G A 47 49.205 13.690 7.911 1.00 26.62 O
TER
ATOM 1 O3' A B 49 45.849 23.906 7.425 1.00 20.90 O
ATOM 2 P A B 50 44.523 24.788 7.455 1.00 26.00 P
ATOM 3 OP1 A B 50 44.761 25.977 6.601 1.00 22.85 O
ATOM 4 OP2 A B 50 44.095 24.965 8.870 1.00 23.33 O
ATOM 5 O5' A B 50 43.412 23.897 6.726 1.00 21.03 O
ATOM 6 C5' A B 50 43.457 23.677 5.321 1.00 18.24 C
ATOM 7 C4' A B 50 42.507 22.569 4.928 1.00 13.85 C
ATOM 8 O4' A B 50 42.806 21.347 5.676 1.00 12.93 O
ATOM 9 C3' A B 50 41.079 22.964 5.312 1.00 13.37 C
ATOM 10 O3' A B 50 40.259 22.339 4.329 1.00 13.50 O
ATOM 11 C2' A B 50 40.840 22.298 6.671 1.00 12.65 C
ATOM 12 O2' A B 50 39.528 21.867 6.921 1.00 13.66 O
ATOM 13 C1' A B 50 41.701 21.055 6.509 1.00 12.78 C
ATOM 14 N9 A B 50 42.072 20.249 7.661 1.00 12.77 N
ATOM 15 C8 A B 50 42.096 20.565 8.995 1.00 12.34 C
ATOM 16 N7 A B 50 42.398 19.546 9.767 1.00 12.41 N
ATOM 17 C5 A B 50 42.597 18.501 8.875 1.00 12.05 C
ATOM 18 C6 A B 50 42.910 17.149 9.070 1.00 10.90 C
ATOM 19 N6 A B 50 43.092 16.609 10.272 1.00 10.50 N
ATOM 20 N1 A B 50 43.027 16.366 7.977 1.00 11.90 N
ATOM 21 C2 A B 50 42.832 16.924 6.765 1.00 12.11 C
ATOM 22 N3 A B 50 42.525 18.188 6.460 1.00 11.24 N
ATOM 23 C4 A B 50 42.420 18.925 7.577 1.00 11.53 C
ATOM 24 P A B 51 39.022 23.077 3.643 1.00 14.28 P
ATOM 25 OP1 A B 51 39.543 23.558 2.325 1.00 15.32 O
ATOM 26 OP2 A B 51 38.338 24.024 4.542 1.00 14.63 O
ATOM 27 O5' A B 51 38.069 21.846 3.338 1.00 13.61 O
TER
ATOM 2 P C A 46 46.349 7.925 7.060 1.00 17.42 P
ATOM 3 OP1 C A 46 47.356 7.713 5.977 1.00 20.07 O
ATOM 4 OP2 C A 46 46.636 7.464 8.434 1.00 19.05 O
ATOM 5 O5' C A 46 46.133 9.494 7.201 1.00 17.65 O
ATOM 6 C5' C A 46 45.764 10.291 6.081 1.00 17.42 C
ATOM 7 C4' C A 46 45.277 11.640 6.565 1.00 16.64 C
ATOM 8 O4' C A 46 44.139 11.438 7.426 1.00 14.79 O
ATOM 9 C3' C A 46 46.263 12.391 7.446 1.00 17.63 C
ATOM 10 O3' C A 46 47.139 13.091 6.584 1.00 20.87 O
ATOM 11 C2' C A 46 45.331 13.335 8.203 1.00 16.43 C
ATOM 12 O2' C A 46 44.852 14.369 7.365 1.00 14.86 O
ATOM 13 C1' C A 46 44.138 12.417 8.454 1.00 13.94 C
ATOM 14 N1 C A 46 44.153 11.729 9.750 1.00 13.10 N
ATOM 15 C2 C A 46 43.580 12.368 10.847 1.00 12.09 C
ATOM 16 O2 C A 46 43.175 13.525 10.710 1.00 13.24 O
ATOM 17 N3 C A 46 43.489 11.711 12.021 1.00 11.67 N
ATOM 18 C4 C A 46 43.975 10.468 12.138 1.00 12.40 C
ATOM 19 N4 C A 46 43.831 9.835 13.322 1.00 12.14 N
ATOM 20 C5 C A 46 44.626 9.812 11.054 1.00 12.01 C
ATOM 21 C6 C A 46 44.688 10.474 9.885 1.00 12.81 C
ATOM 22 P G A 47 48.728 12.846 6.660 1.00 24.16 P
ATOM 23 OP1 G A 47 49.270 13.445 5.410 1.00 23.67 O
ATOM 24 OP2 G A 47 48.943 11.426 6.942 1.00 23.26 O
ATOM 25 O5' G A 47 49.205 13.690 7.911 1.00 26.62 O
TER
ATOM 1 O3' A B 49 45.849 23.906 7.425 1.00 20.90 O
ATOM 2 P A B 50 44.523 24.788 7.455 1.00 26.00 P
ATOM 3 OP1 A B 50 44.761 25.977 6.601 1.00 22.85 O
ATOM 4 OP2 A B 50 44.095 24.965 8.870 1.00 23.33 O
ATOM 5 O5' A B 50 43.412 23.897 6.726 1.00 21.03 O
ATOM 6 C5' A B 50 43.457 23.677 5.321 1.00 18.24 C
ATOM 7 C4' A B 50 42.507 22.569 4.928 1.00 13.85 C
ATOM 8 O4' A B 50 42.806 21.347 5.676 1.00 12.93 O
ATOM 9 C3' A B 50 41.079 22.964 5.312 1.00 13.37 C
ATOM 10 O3' A B 50 40.259 22.339 4.329 1.00 13.50 O
ATOM 11 C2' A B 50 40.840 22.298 6.671 1.00 12.65 C
ATOM 12 O2' A B 50 39.528 21.867 6.921 1.00 13.66 O
ATOM 13 C1' A B 50 41.701 21.055 6.509 1.00 12.78 C
ATOM 14 N9 A B 50 42.072 20.249 7.661 1.00 12.77 N
ATOM 15 C8 A B 50 42.096 20.565 8.995 1.00 12.34 C
ATOM 16 N7 A B 50 42.398 19.546 9.767 1.00 12.41 N
ATOM 17 C5 A B 50 42.597 18.501 8.875 1.00 12.05 C
ATOM 18 C6 A B 50 42.910 17.149 9.070 1.00 10.90 C
ATOM 19 N6 A B 50 43.092 16.609 10.272 1.00 10.50 N
ATOM 20 N1 A B 50 43.027 16.366 7.977 1.00 11.90 N
ATOM 21 C2 A B 50 42.832 16.924 6.765 1.00 12.11 C
ATOM 22 N3 A B 50 42.525 18.188 6.460 1.00 11.24 N
ATOM 23 C4 A B 50 42.420 18.925 7.577 1.00 11.53 C
ATOM 24 P A B 51 39.022 23.077 3.643 1.00 14.28 P
ATOM 25 OP1 A B 51 39.543 23.558 2.325 1.00 15.32 O
ATOM 26 OP2 A B 51 38.338 24.024 4.542 1.00 14.63 O
ATOM 27 O5' A B 51 38.069 21.846 3.338 1.00 13.61 O
TER
Atoms:
C2: (43.580,12.368,10.847)
OP1: (47.356,7.713,5.977)
OP2: (46.636,7.464,8.434)
C4: (43.975,10.468,12.138)
O5': (46.133,9.494,7.201)
C3': (46.263,12.391,7.446)
C1': (44.138,12.417,8.454)
O4': (44.139,11.438,7.426)
C5': (45.764,10.291,6.081)
P: (46.349,7.925,7.060)
O2: (43.175,13.525,10.710)
C4': (45.277,11.640,6.565)
C2': (45.331,13.335,8.203)
O2': (44.852,14.369,7.365)
N1: (44.153,11.729,9.750)
N3: (43.489,11.711,12.021)
N4: (43.831,9.835,13.322)
C6: (44.688,10.474,9.885)
C5: (44.626,9.812,11.054)
O3': (47.139,13.091,6.584)
OP1: (47.356,7.713,5.977)
OP2: (46.636,7.464,8.434)
C4: (43.975,10.468,12.138)
O5': (46.133,9.494,7.201)
C3': (46.263,12.391,7.446)
C1': (44.138,12.417,8.454)
O4': (44.139,11.438,7.426)
C5': (45.764,10.291,6.081)
P: (46.349,7.925,7.060)
O2: (43.175,13.525,10.710)
C4': (45.277,11.640,6.565)
C2': (45.331,13.335,8.203)
O2': (44.852,14.369,7.365)
N1: (44.153,11.729,9.750)
N3: (43.489,11.711,12.021)
N4: (43.831,9.835,13.322)
C6: (44.688,10.474,9.885)
C5: (44.626,9.812,11.054)
O3': (47.139,13.091,6.584)
OP1: (44.761,25.977,6.601)
OP2: (44.095,24.965,8.870)
C3': (41.079,22.964,5.312)
C1': (41.701,21.055,6.509)
C5': (43.457,23.677,5.321)
O4': (42.806,21.347,5.676)
C8: (42.096,20.565,8.995)
O2': (39.528,21.867,6.921)
C6: (42.910,17.149,9.070)
C5: (42.597,18.501,8.875)
C4: (42.420,18.925,7.577)
P: (44.523,24.788,7.455)
C4': (42.507,22.569,4.928)
C2': (40.840,22.298,6.671)
C2: (42.832,16.924,6.765)
N1: (43.027,16.366,7.977)
N3: (42.525,18.188,6.460)
N6: (43.092,16.609,10.272)
N7: (42.398,19.546,9.767)
N9: (42.072,20.249,7.661)
O5': (43.412,23.897,6.726)
O3': (40.259,22.339,4.329)
OP2: (44.095,24.965,8.870)
C3': (41.079,22.964,5.312)
C1': (41.701,21.055,6.509)
C5': (43.457,23.677,5.321)
O4': (42.806,21.347,5.676)
C8: (42.096,20.565,8.995)
O2': (39.528,21.867,6.921)
C6: (42.910,17.149,9.070)
C5: (42.597,18.501,8.875)
C4: (42.420,18.925,7.577)
P: (44.523,24.788,7.455)
C4': (42.507,22.569,4.928)
C2': (40.840,22.298,6.671)
C2: (42.832,16.924,6.765)
N1: (43.027,16.366,7.977)
N3: (42.525,18.188,6.460)
N6: (43.092,16.609,10.272)
N7: (42.398,19.546,9.767)
N9: (42.072,20.249,7.661)
O5': (43.412,23.897,6.726)
O3': (40.259,22.339,4.329)
Image (generated by PyMOL):