Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K9M:A26:A662
Extra
PDB:
ATOM 1 O3' U A 25 46.884 119.971 43.791 1.00 36.82 O
ATOM 2 P C A 26 47.577 119.805 42.344 1.00 36.56 P
ATOM 3 OP1 C A 26 48.468 118.624 42.412 1.00 34.95 O
ATOM 4 OP2 C A 26 48.124 121.124 41.943 1.00 34.89 O
ATOM 5 O5' C A 26 46.363 119.445 41.384 1.00 38.95 O
ATOM 6 C5' C A 26 45.618 118.236 41.592 1.00 38.73 C
ATOM 7 C4' C A 26 44.509 118.133 40.583 1.00 38.68 C
ATOM 8 O4' C A 26 43.594 119.243 40.788 1.00 37.39 O
ATOM 9 C3' C A 26 44.908 118.260 39.120 1.00 38.76 C
ATOM 10 O3' C A 26 45.408 117.066 38.521 1.00 39.47 O
ATOM 11 C2' C A 26 43.601 118.689 38.488 1.00 38.45 C
ATOM 12 O2' C A 26 42.730 117.581 38.402 1.00 39.23 O
ATOM 13 C1' C A 26 43.074 119.663 39.540 1.00 38.04 C
ATOM 14 N1 C A 26 43.464 121.071 39.314 1.00 38.55 N
ATOM 15 C2 C A 26 42.673 121.858 38.476 1.00 39.29 C
ATOM 16 O2 C A 26 41.715 121.334 37.894 1.00 40.62 O
ATOM 17 N3 C A 26 42.973 123.175 38.323 1.00 40.05 N
ATOM 18 C4 C A 26 44.022 123.702 38.966 1.00 39.81 C
ATOM 19 N4 C A 26 44.260 125.010 38.814 1.00 40.23 N
ATOM 20 C5 C A 26 44.868 122.912 39.795 1.00 39.01 C
ATOM 21 C6 C A 26 44.558 121.615 39.935 1.00 39.67 C
ATOM 22 P A A 27 46.419 117.185 37.270 1.00 41.07 P
ATOM 23 OP1 A A 27 46.911 115.824 36.907 1.00 40.95 O
ATOM 24 OP2 A A 27 47.389 118.233 37.618 1.00 40.68 O
ATOM 25 O5' A A 27 45.538 117.793 36.088 1.00 42.23 O
TER
ATOM 1 O3' U B 661 34.993 115.710 28.954 1.00 59.13 O
ATOM 2 P A B 662 35.216 116.227 30.461 1.00 58.47 P
ATOM 3 OP1 A B 662 33.945 116.764 31.036 1.00 57.96 O
ATOM 4 OP2 A B 662 36.421 117.101 30.389 1.00 58.83 O
ATOM 5 O5' A B 662 35.609 114.896 31.231 1.00 57.50 O
ATOM 6 C5' A B 662 36.482 113.933 30.627 1.00 56.30 C
ATOM 7 C4' A B 662 37.322 113.283 31.695 1.00 55.28 C
ATOM 8 O4' A B 662 38.176 114.305 32.284 1.00 55.25 O
ATOM 9 C3' A B 662 36.528 112.681 32.854 1.00 54.52 C
ATOM 10 O3' A B 662 37.185 111.510 33.333 1.00 51.99 O
ATOM 11 C2' A B 662 36.548 113.803 33.888 1.00 54.75 C
ATOM 12 O2' A B 662 36.397 113.361 35.225 1.00 56.15 O
ATOM 13 C1' A B 662 37.942 114.371 33.671 1.00 55.35 C
ATOM 14 N9 A B 662 38.116 115.747 34.126 1.00 56.05 N
ATOM 15 C8 A B 662 37.397 116.882 33.806 1.00 56.76 C
ATOM 16 N7 A B 662 37.830 117.969 34.403 1.00 56.66 N
ATOM 17 C5 A B 662 38.911 117.520 35.159 1.00 57.08 C
ATOM 18 C6 A B 662 39.812 118.182 36.004 1.00 57.05 C
ATOM 19 N6 A B 662 39.795 119.494 36.224 1.00 56.88 N
ATOM 20 N1 A B 662 40.758 117.439 36.617 1.00 57.44 N
ATOM 21 C2 A B 662 40.803 116.121 36.380 1.00 57.53 C
ATOM 22 N3 A B 662 40.028 115.383 35.596 1.00 56.34 N
ATOM 23 C4 A B 662 39.089 116.152 35.006 1.00 56.69 C
ATOM 24 P U B 663 36.650 110.064 32.884 1.00 49.58 P
ATOM 25 OP1 U B 663 37.519 109.040 33.514 1.00 47.69 O
ATOM 26 OP2 U B 663 36.497 110.076 31.399 1.00 51.78 O
ATOM 27 O5' U B 663 35.207 109.988 33.561 1.00 48.67 O
TER
ATOM 2 P C A 26 47.577 119.805 42.344 1.00 36.56 P
ATOM 3 OP1 C A 26 48.468 118.624 42.412 1.00 34.95 O
ATOM 4 OP2 C A 26 48.124 121.124 41.943 1.00 34.89 O
ATOM 5 O5' C A 26 46.363 119.445 41.384 1.00 38.95 O
ATOM 6 C5' C A 26 45.618 118.236 41.592 1.00 38.73 C
ATOM 7 C4' C A 26 44.509 118.133 40.583 1.00 38.68 C
ATOM 8 O4' C A 26 43.594 119.243 40.788 1.00 37.39 O
ATOM 9 C3' C A 26 44.908 118.260 39.120 1.00 38.76 C
ATOM 10 O3' C A 26 45.408 117.066 38.521 1.00 39.47 O
ATOM 11 C2' C A 26 43.601 118.689 38.488 1.00 38.45 C
ATOM 12 O2' C A 26 42.730 117.581 38.402 1.00 39.23 O
ATOM 13 C1' C A 26 43.074 119.663 39.540 1.00 38.04 C
ATOM 14 N1 C A 26 43.464 121.071 39.314 1.00 38.55 N
ATOM 15 C2 C A 26 42.673 121.858 38.476 1.00 39.29 C
ATOM 16 O2 C A 26 41.715 121.334 37.894 1.00 40.62 O
ATOM 17 N3 C A 26 42.973 123.175 38.323 1.00 40.05 N
ATOM 18 C4 C A 26 44.022 123.702 38.966 1.00 39.81 C
ATOM 19 N4 C A 26 44.260 125.010 38.814 1.00 40.23 N
ATOM 20 C5 C A 26 44.868 122.912 39.795 1.00 39.01 C
ATOM 21 C6 C A 26 44.558 121.615 39.935 1.00 39.67 C
ATOM 22 P A A 27 46.419 117.185 37.270 1.00 41.07 P
ATOM 23 OP1 A A 27 46.911 115.824 36.907 1.00 40.95 O
ATOM 24 OP2 A A 27 47.389 118.233 37.618 1.00 40.68 O
ATOM 25 O5' A A 27 45.538 117.793 36.088 1.00 42.23 O
TER
ATOM 1 O3' U B 661 34.993 115.710 28.954 1.00 59.13 O
ATOM 2 P A B 662 35.216 116.227 30.461 1.00 58.47 P
ATOM 3 OP1 A B 662 33.945 116.764 31.036 1.00 57.96 O
ATOM 4 OP2 A B 662 36.421 117.101 30.389 1.00 58.83 O
ATOM 5 O5' A B 662 35.609 114.896 31.231 1.00 57.50 O
ATOM 6 C5' A B 662 36.482 113.933 30.627 1.00 56.30 C
ATOM 7 C4' A B 662 37.322 113.283 31.695 1.00 55.28 C
ATOM 8 O4' A B 662 38.176 114.305 32.284 1.00 55.25 O
ATOM 9 C3' A B 662 36.528 112.681 32.854 1.00 54.52 C
ATOM 10 O3' A B 662 37.185 111.510 33.333 1.00 51.99 O
ATOM 11 C2' A B 662 36.548 113.803 33.888 1.00 54.75 C
ATOM 12 O2' A B 662 36.397 113.361 35.225 1.00 56.15 O
ATOM 13 C1' A B 662 37.942 114.371 33.671 1.00 55.35 C
ATOM 14 N9 A B 662 38.116 115.747 34.126 1.00 56.05 N
ATOM 15 C8 A B 662 37.397 116.882 33.806 1.00 56.76 C
ATOM 16 N7 A B 662 37.830 117.969 34.403 1.00 56.66 N
ATOM 17 C5 A B 662 38.911 117.520 35.159 1.00 57.08 C
ATOM 18 C6 A B 662 39.812 118.182 36.004 1.00 57.05 C
ATOM 19 N6 A B 662 39.795 119.494 36.224 1.00 56.88 N
ATOM 20 N1 A B 662 40.758 117.439 36.617 1.00 57.44 N
ATOM 21 C2 A B 662 40.803 116.121 36.380 1.00 57.53 C
ATOM 22 N3 A B 662 40.028 115.383 35.596 1.00 56.34 N
ATOM 23 C4 A B 662 39.089 116.152 35.006 1.00 56.69 C
ATOM 24 P U B 663 36.650 110.064 32.884 1.00 49.58 P
ATOM 25 OP1 U B 663 37.519 109.040 33.514 1.00 47.69 O
ATOM 26 OP2 U B 663 36.497 110.076 31.399 1.00 51.78 O
ATOM 27 O5' U B 663 35.207 109.988 33.561 1.00 48.67 O
TER
Atoms:
C2: (42.673,121.858,38.476)
OP1: (48.468,118.624,42.412)
OP2: (48.124,121.124,41.943)
C4: (44.022,123.702,38.966)
O5': (46.363,119.445,41.384)
C3': (44.908,118.260,39.120)
C1': (43.074,119.663,39.540)
O4': (43.594,119.243,40.788)
C5': (45.618,118.236,41.592)
P: (47.577,119.805,42.344)
O2: (41.715,121.334,37.894)
C4': (44.509,118.133,40.583)
C2': (43.601,118.689,38.488)
O2': (42.730,117.581,38.402)
N1: (43.464,121.071,39.314)
N3: (42.973,123.175,38.323)
N4: (44.260,125.010,38.814)
C6: (44.558,121.615,39.935)
C5: (44.868,122.912,39.795)
O3': (45.408,117.066,38.521)
OP1: (48.468,118.624,42.412)
OP2: (48.124,121.124,41.943)
C4: (44.022,123.702,38.966)
O5': (46.363,119.445,41.384)
C3': (44.908,118.260,39.120)
C1': (43.074,119.663,39.540)
O4': (43.594,119.243,40.788)
C5': (45.618,118.236,41.592)
P: (47.577,119.805,42.344)
O2: (41.715,121.334,37.894)
C4': (44.509,118.133,40.583)
C2': (43.601,118.689,38.488)
O2': (42.730,117.581,38.402)
N1: (43.464,121.071,39.314)
N3: (42.973,123.175,38.323)
N4: (44.260,125.010,38.814)
C6: (44.558,121.615,39.935)
C5: (44.868,122.912,39.795)
O3': (45.408,117.066,38.521)
OP1: (33.945,116.764,31.036)
OP2: (36.421,117.101,30.389)
C3': (36.528,112.681,32.854)
C1': (37.942,114.371,33.671)
C5': (36.482,113.933,30.627)
O4': (38.176,114.305,32.284)
C8: (37.397,116.882,33.806)
O2': (36.397,113.361,35.225)
C6: (39.812,118.182,36.004)
C5: (38.911,117.520,35.159)
C4: (39.089,116.152,35.006)
P: (35.216,116.227,30.461)
C4': (37.322,113.283,31.695)
C2': (36.548,113.803,33.888)
C2: (40.803,116.121,36.380)
N1: (40.758,117.439,36.617)
N3: (40.028,115.383,35.596)
N6: (39.795,119.494,36.224)
N7: (37.830,117.969,34.403)
N9: (38.116,115.747,34.126)
O5': (35.609,114.896,31.231)
O3': (37.185,111.510,33.333)
OP2: (36.421,117.101,30.389)
C3': (36.528,112.681,32.854)
C1': (37.942,114.371,33.671)
C5': (36.482,113.933,30.627)
O4': (38.176,114.305,32.284)
C8: (37.397,116.882,33.806)
O2': (36.397,113.361,35.225)
C6: (39.812,118.182,36.004)
C5: (38.911,117.520,35.159)
C4: (39.089,116.152,35.006)
P: (35.216,116.227,30.461)
C4': (37.322,113.283,31.695)
C2': (36.548,113.803,33.888)
C2: (40.803,116.121,36.380)
N1: (40.758,117.439,36.617)
N3: (40.028,115.383,35.596)
N6: (39.795,119.494,36.224)
N7: (37.830,117.969,34.403)
N9: (38.116,115.747,34.126)
O5': (35.609,114.896,31.231)
O3': (37.185,111.510,33.333)
Image (generated by PyMOL):