Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:B28:B55
Extra
PDB:
ATOM 1 O3' U A 27 70.399 17.535 101.830 1.00 73.81 O
ATOM 2 P C A 28 71.725 17.386 100.930 1.00 72.80 P
ATOM 3 OP1 C A 28 72.094 18.742 100.473 1.00 72.86 O
ATOM 4 OP2 C A 28 71.496 16.328 99.932 1.00 73.17 O
ATOM 5 O5' C A 28 72.810 16.869 101.981 1.00 74.72 O
ATOM 6 C5' C A 28 73.070 17.620 103.182 1.00 75.75 C
ATOM 7 C4' C A 28 72.971 16.735 104.404 1.00 77.88 C
ATOM 8 O4' C A 28 71.696 16.027 104.447 1.00 77.47 O
ATOM 9 C3' C A 28 73.985 15.618 104.478 1.00 78.95 C
ATOM 10 O3' C A 28 75.272 16.110 104.824 1.00 80.59 O
ATOM 11 C2' C A 28 73.353 14.681 105.505 1.00 78.55 C
ATOM 12 O2' C A 28 73.477 15.052 106.875 1.00 78.41 O
ATOM 13 C1' C A 28 71.878 14.775 105.101 1.00 78.56 C
ATOM 14 N1 C A 28 71.465 13.687 104.192 1.00 77.78 N
ATOM 15 C2 C A 28 71.316 12.398 104.725 1.00 77.76 C
ATOM 16 O2 C A 28 71.522 12.216 105.937 1.00 78.06 O
ATOM 17 N3 C A 28 70.957 11.386 103.914 1.00 78.43 N
ATOM 18 C4 C A 28 70.749 11.612 102.619 1.00 78.24 C
ATOM 19 N4 C A 28 70.404 10.571 101.865 1.00 78.69 N
ATOM 20 C5 C A 28 70.887 12.913 102.045 1.00 77.39 C
ATOM 21 C6 C A 28 71.239 13.912 102.862 1.00 77.05 C
ATOM 22 P C A 29 76.572 15.537 104.062 1.00 81.70 P
ATOM 23 OP1 C A 29 77.766 15.798 104.908 1.00 80.31 O
ATOM 24 OP2 C A 29 76.530 16.021 102.668 1.00 80.19 O
ATOM 25 O5' C A 29 76.365 13.961 104.029 1.00 83.25 O
TER
ATOM 1 O3' U B 54 66.072 12.266 113.894 1.00 88.52 O
ATOM 2 P A B 55 66.398 12.642 115.399 1.00 88.52 P
ATOM 3 OP1 A B 55 66.138 11.387 116.149 1.00 88.37 O
ATOM 4 OP2 A B 55 65.685 13.888 115.789 1.00 88.57 O
ATOM 5 O5' A B 55 67.971 12.909 115.349 1.00 87.08 O
ATOM 6 C5' A B 55 68.695 13.340 116.523 1.00 84.92 C
ATOM 7 C4' A B 55 69.854 14.222 116.123 1.00 82.78 C
ATOM 8 O4' A B 55 70.813 13.456 115.358 1.00 83.32 O
ATOM 9 C3' A B 55 69.496 15.389 115.221 1.00 81.82 C
ATOM 10 O3' A B 55 69.084 16.500 116.006 1.00 80.67 O
ATOM 11 C2' A B 55 70.810 15.672 114.512 1.00 81.67 C
ATOM 12 O2' A B 55 71.703 16.432 115.299 1.00 82.79 O
ATOM 13 C1' A B 55 71.352 14.258 114.323 1.00 81.91 C
ATOM 14 N9 A B 55 70.933 13.671 113.056 1.00 81.63 N
ATOM 15 C8 A B 55 69.962 12.719 112.843 1.00 81.55 C
ATOM 16 N7 A B 55 69.829 12.378 111.586 1.00 81.26 N
ATOM 17 C5 A B 55 70.768 13.159 110.929 1.00 80.34 C
ATOM 18 C6 A B 55 71.119 13.266 109.585 1.00 79.91 C
ATOM 19 N6 A B 55 70.538 12.559 108.617 1.00 80.06 N
ATOM 20 N1 A B 55 72.098 14.136 109.256 1.00 79.67 N
ATOM 21 C2 A B 55 72.669 14.856 110.230 1.00 80.21 C
ATOM 22 N3 A B 55 72.418 14.849 111.536 1.00 80.56 N
ATOM 23 C4 A B 55 71.449 13.964 111.821 1.00 80.74 C
ATOM 24 P A B 56 67.823 17.393 115.553 1.00 79.66 P
ATOM 25 OP1 A B 56 67.425 18.132 116.782 1.00 79.52 O
ATOM 26 OP2 A B 56 66.832 16.548 114.845 1.00 79.14 O
ATOM 27 O5' A B 56 68.411 18.429 114.498 1.00 78.66 O
TER
ATOM 2 P C A 28 71.725 17.386 100.930 1.00 72.80 P
ATOM 3 OP1 C A 28 72.094 18.742 100.473 1.00 72.86 O
ATOM 4 OP2 C A 28 71.496 16.328 99.932 1.00 73.17 O
ATOM 5 O5' C A 28 72.810 16.869 101.981 1.00 74.72 O
ATOM 6 C5' C A 28 73.070 17.620 103.182 1.00 75.75 C
ATOM 7 C4' C A 28 72.971 16.735 104.404 1.00 77.88 C
ATOM 8 O4' C A 28 71.696 16.027 104.447 1.00 77.47 O
ATOM 9 C3' C A 28 73.985 15.618 104.478 1.00 78.95 C
ATOM 10 O3' C A 28 75.272 16.110 104.824 1.00 80.59 O
ATOM 11 C2' C A 28 73.353 14.681 105.505 1.00 78.55 C
ATOM 12 O2' C A 28 73.477 15.052 106.875 1.00 78.41 O
ATOM 13 C1' C A 28 71.878 14.775 105.101 1.00 78.56 C
ATOM 14 N1 C A 28 71.465 13.687 104.192 1.00 77.78 N
ATOM 15 C2 C A 28 71.316 12.398 104.725 1.00 77.76 C
ATOM 16 O2 C A 28 71.522 12.216 105.937 1.00 78.06 O
ATOM 17 N3 C A 28 70.957 11.386 103.914 1.00 78.43 N
ATOM 18 C4 C A 28 70.749 11.612 102.619 1.00 78.24 C
ATOM 19 N4 C A 28 70.404 10.571 101.865 1.00 78.69 N
ATOM 20 C5 C A 28 70.887 12.913 102.045 1.00 77.39 C
ATOM 21 C6 C A 28 71.239 13.912 102.862 1.00 77.05 C
ATOM 22 P C A 29 76.572 15.537 104.062 1.00 81.70 P
ATOM 23 OP1 C A 29 77.766 15.798 104.908 1.00 80.31 O
ATOM 24 OP2 C A 29 76.530 16.021 102.668 1.00 80.19 O
ATOM 25 O5' C A 29 76.365 13.961 104.029 1.00 83.25 O
TER
ATOM 1 O3' U B 54 66.072 12.266 113.894 1.00 88.52 O
ATOM 2 P A B 55 66.398 12.642 115.399 1.00 88.52 P
ATOM 3 OP1 A B 55 66.138 11.387 116.149 1.00 88.37 O
ATOM 4 OP2 A B 55 65.685 13.888 115.789 1.00 88.57 O
ATOM 5 O5' A B 55 67.971 12.909 115.349 1.00 87.08 O
ATOM 6 C5' A B 55 68.695 13.340 116.523 1.00 84.92 C
ATOM 7 C4' A B 55 69.854 14.222 116.123 1.00 82.78 C
ATOM 8 O4' A B 55 70.813 13.456 115.358 1.00 83.32 O
ATOM 9 C3' A B 55 69.496 15.389 115.221 1.00 81.82 C
ATOM 10 O3' A B 55 69.084 16.500 116.006 1.00 80.67 O
ATOM 11 C2' A B 55 70.810 15.672 114.512 1.00 81.67 C
ATOM 12 O2' A B 55 71.703 16.432 115.299 1.00 82.79 O
ATOM 13 C1' A B 55 71.352 14.258 114.323 1.00 81.91 C
ATOM 14 N9 A B 55 70.933 13.671 113.056 1.00 81.63 N
ATOM 15 C8 A B 55 69.962 12.719 112.843 1.00 81.55 C
ATOM 16 N7 A B 55 69.829 12.378 111.586 1.00 81.26 N
ATOM 17 C5 A B 55 70.768 13.159 110.929 1.00 80.34 C
ATOM 18 C6 A B 55 71.119 13.266 109.585 1.00 79.91 C
ATOM 19 N6 A B 55 70.538 12.559 108.617 1.00 80.06 N
ATOM 20 N1 A B 55 72.098 14.136 109.256 1.00 79.67 N
ATOM 21 C2 A B 55 72.669 14.856 110.230 1.00 80.21 C
ATOM 22 N3 A B 55 72.418 14.849 111.536 1.00 80.56 N
ATOM 23 C4 A B 55 71.449 13.964 111.821 1.00 80.74 C
ATOM 24 P A B 56 67.823 17.393 115.553 1.00 79.66 P
ATOM 25 OP1 A B 56 67.425 18.132 116.782 1.00 79.52 O
ATOM 26 OP2 A B 56 66.832 16.548 114.845 1.00 79.14 O
ATOM 27 O5' A B 56 68.411 18.429 114.498 1.00 78.66 O
TER
Atoms:
C2: (71.316,12.398,104.725)
OP1: (72.094,18.742,100.473)
OP2: (71.496,16.328,99.932)
C4: (70.749,11.612,102.619)
O5': (72.810,16.869,101.981)
C3': (73.985,15.618,104.478)
C1': (71.878,14.775,105.101)
O4': (71.696,16.027,104.447)
C5': (73.070,17.620,103.182)
P: (71.725,17.386,100.930)
O2: (71.522,12.216,105.937)
C4': (72.971,16.735,104.404)
C2': (73.353,14.681,105.505)
O2': (73.477,15.052,106.875)
N1: (71.465,13.687,104.192)
N3: (70.957,11.386,103.914)
N4: (70.404,10.571,101.865)
C6: (71.239,13.912,102.862)
C5: (70.887,12.913,102.045)
O3': (75.272,16.110,104.824)
OP1: (72.094,18.742,100.473)
OP2: (71.496,16.328,99.932)
C4: (70.749,11.612,102.619)
O5': (72.810,16.869,101.981)
C3': (73.985,15.618,104.478)
C1': (71.878,14.775,105.101)
O4': (71.696,16.027,104.447)
C5': (73.070,17.620,103.182)
P: (71.725,17.386,100.930)
O2: (71.522,12.216,105.937)
C4': (72.971,16.735,104.404)
C2': (73.353,14.681,105.505)
O2': (73.477,15.052,106.875)
N1: (71.465,13.687,104.192)
N3: (70.957,11.386,103.914)
N4: (70.404,10.571,101.865)
C6: (71.239,13.912,102.862)
C5: (70.887,12.913,102.045)
O3': (75.272,16.110,104.824)
OP1: (66.138,11.387,116.149)
OP2: (65.685,13.888,115.789)
C3': (69.496,15.389,115.221)
C1': (71.352,14.258,114.323)
C5': (68.695,13.340,116.523)
O4': (70.813,13.456,115.358)
C8: (69.962,12.719,112.843)
O2': (71.703,16.432,115.299)
C6: (71.119,13.266,109.585)
C5: (70.768,13.159,110.929)
C4: (71.449,13.964,111.821)
P: (66.398,12.642,115.399)
C4': (69.854,14.222,116.123)
C2': (70.810,15.672,114.512)
C2: (72.669,14.856,110.230)
N1: (72.098,14.136,109.256)
N3: (72.418,14.849,111.536)
N6: (70.538,12.559,108.617)
N7: (69.829,12.378,111.586)
N9: (70.933,13.671,113.056)
O5': (67.971,12.909,115.349)
O3': (69.084,16.500,116.006)
OP2: (65.685,13.888,115.789)
C3': (69.496,15.389,115.221)
C1': (71.352,14.258,114.323)
C5': (68.695,13.340,116.523)
O4': (70.813,13.456,115.358)
C8: (69.962,12.719,112.843)
O2': (71.703,16.432,115.299)
C6: (71.119,13.266,109.585)
C5: (70.768,13.159,110.929)
C4: (71.449,13.964,111.821)
P: (66.398,12.642,115.399)
C4': (69.854,14.222,116.123)
C2': (70.810,15.672,114.512)
C2: (72.669,14.856,110.230)
N1: (72.098,14.136,109.256)
N3: (72.418,14.849,111.536)
N6: (70.538,12.559,108.617)
N7: (69.829,12.378,111.586)
N9: (70.933,13.671,113.056)
O5': (67.971,12.909,115.349)
O3': (69.084,16.500,116.006)
Image (generated by PyMOL):