Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02129:02372
Extra
PDB:
ATOM 1 O3' U A2128 69.667 94.811 95.574 1.00 42.39 O
ATOM 2 P G A2129 68.992 94.169 96.872 1.00 44.80 P
ATOM 3 OP1 G A2129 70.073 93.974 97.869 1.00 44.64 O
ATOM 4 OP2 G A2129 68.152 93.011 96.451 1.00 45.20 O
ATOM 5 O5' G A2129 68.013 95.303 97.390 1.00 42.60 O
ATOM 6 C5' G A2129 68.512 96.410 98.123 1.00 40.30 C
ATOM 7 C4' G A2129 67.461 97.484 98.211 1.00 41.96 C
ATOM 8 O4' G A2129 66.206 96.933 98.714 1.00 41.58 O
ATOM 9 C3' G A2129 67.841 98.598 99.170 1.00 41.75 C
ATOM 10 O3' G A2129 67.265 99.809 98.715 1.00 40.11 O
ATOM 11 C2' G A2129 67.177 98.151 100.462 1.00 41.85 C
ATOM 12 O2' G A2129 66.941 99.218 101.350 1.00 44.57 O
ATOM 13 C1' G A2129 65.867 97.579 99.926 1.00 42.60 C
ATOM 14 N9 G A2129 65.237 96.621 100.831 1.00 44.46 N
ATOM 15 C8 G A2129 64.268 96.907 101.764 1.00 45.04 C
ATOM 16 N7 G A2129 63.899 95.866 102.456 1.00 45.57 N
ATOM 17 C5 G A2129 64.666 94.825 101.952 1.00 44.33 C
ATOM 18 C6 G A2129 64.708 93.462 102.322 1.00 45.36 C
ATOM 19 O6 G A2129 64.063 92.887 103.211 1.00 47.52 O
ATOM 20 N1 G A2129 65.619 92.747 101.547 1.00 44.84 N
ATOM 21 C2 G A2129 66.397 93.282 100.549 1.00 44.63 C
ATOM 22 N2 G A2129 67.203 92.429 99.905 1.00 41.67 N
ATOM 23 N3 G A2129 66.379 94.561 100.206 1.00 45.04 N
ATOM 24 C4 G A2129 65.494 95.269 100.943 1.00 44.55 C
ATOM 25 P G A2130 68.199 101.079 98.455 1.00 40.65 P
ATOM 26 OP1 G A2130 69.565 100.802 98.989 1.00 40.68 O
ATOM 27 OP2 G A2130 67.437 102.255 98.958 1.00 38.90 O
ATOM 28 O5' G A2130 68.315 101.155 96.866 1.00 39.29 O
TER
ATOM 1 O3' C B2371 67.358 99.731 106.031 1.00 42.38 O
ATOM 2 P U B2372 67.033 100.110 104.505 1.00 41.85 P
ATOM 3 OP1 U B2372 67.305 98.881 103.714 1.00 41.88 O
ATOM 4 OP2 U B2372 67.728 101.377 104.161 1.00 40.85 O
ATOM 5 O5' U B2372 65.467 100.387 104.496 1.00 42.05 O
ATOM 6 C5' U B2372 64.519 99.352 104.818 1.00 39.75 C
ATOM 7 C4' U B2372 63.128 99.930 104.872 1.00 38.38 C
ATOM 8 O4' U B2372 63.084 100.962 105.885 1.00 39.91 O
ATOM 9 C3' U B2372 62.695 100.664 103.615 1.00 38.45 C
ATOM 10 O3' U B2372 62.211 99.723 102.663 1.00 40.24 O
ATOM 11 C2' U B2372 61.589 101.583 104.130 1.00 39.03 C
ATOM 12 O2' U B2372 60.328 100.951 104.229 1.00 39.95 O
ATOM 13 C1' U B2372 62.082 101.905 105.545 1.00 39.24 C
ATOM 14 N1 U B2372 62.591 103.269 105.770 1.00 38.04 N
ATOM 15 C2 U B2372 61.666 104.244 106.107 1.00 39.03 C
ATOM 16 O2 U B2372 60.472 104.018 106.217 1.00 41.70 O
ATOM 17 N3 U B2372 62.189 105.497 106.310 1.00 37.81 N
ATOM 18 C4 U B2372 63.509 105.873 106.209 1.00 36.64 C
ATOM 19 O4 U B2372 63.818 107.050 106.397 1.00 33.19 O
ATOM 20 C5 U B2372 64.404 104.812 105.856 1.00 36.63 C
ATOM 21 C6 U B2372 63.927 103.578 105.654 1.00 36.25 C
ATOM 22 P A B2373 62.493 99.942 101.097 1.00 40.81 P
ATOM 23 OP1 A B2373 62.003 98.718 100.402 1.00 41.35 O
ATOM 24 OP2 A B2373 63.896 100.386 100.906 1.00 39.79 O
ATOM 25 O5' A B2373 61.529 101.142 100.693 1.00 41.52 O
TER
ATOM 2 P G A2129 68.992 94.169 96.872 1.00 44.80 P
ATOM 3 OP1 G A2129 70.073 93.974 97.869 1.00 44.64 O
ATOM 4 OP2 G A2129 68.152 93.011 96.451 1.00 45.20 O
ATOM 5 O5' G A2129 68.013 95.303 97.390 1.00 42.60 O
ATOM 6 C5' G A2129 68.512 96.410 98.123 1.00 40.30 C
ATOM 7 C4' G A2129 67.461 97.484 98.211 1.00 41.96 C
ATOM 8 O4' G A2129 66.206 96.933 98.714 1.00 41.58 O
ATOM 9 C3' G A2129 67.841 98.598 99.170 1.00 41.75 C
ATOM 10 O3' G A2129 67.265 99.809 98.715 1.00 40.11 O
ATOM 11 C2' G A2129 67.177 98.151 100.462 1.00 41.85 C
ATOM 12 O2' G A2129 66.941 99.218 101.350 1.00 44.57 O
ATOM 13 C1' G A2129 65.867 97.579 99.926 1.00 42.60 C
ATOM 14 N9 G A2129 65.237 96.621 100.831 1.00 44.46 N
ATOM 15 C8 G A2129 64.268 96.907 101.764 1.00 45.04 C
ATOM 16 N7 G A2129 63.899 95.866 102.456 1.00 45.57 N
ATOM 17 C5 G A2129 64.666 94.825 101.952 1.00 44.33 C
ATOM 18 C6 G A2129 64.708 93.462 102.322 1.00 45.36 C
ATOM 19 O6 G A2129 64.063 92.887 103.211 1.00 47.52 O
ATOM 20 N1 G A2129 65.619 92.747 101.547 1.00 44.84 N
ATOM 21 C2 G A2129 66.397 93.282 100.549 1.00 44.63 C
ATOM 22 N2 G A2129 67.203 92.429 99.905 1.00 41.67 N
ATOM 23 N3 G A2129 66.379 94.561 100.206 1.00 45.04 N
ATOM 24 C4 G A2129 65.494 95.269 100.943 1.00 44.55 C
ATOM 25 P G A2130 68.199 101.079 98.455 1.00 40.65 P
ATOM 26 OP1 G A2130 69.565 100.802 98.989 1.00 40.68 O
ATOM 27 OP2 G A2130 67.437 102.255 98.958 1.00 38.90 O
ATOM 28 O5' G A2130 68.315 101.155 96.866 1.00 39.29 O
TER
ATOM 1 O3' C B2371 67.358 99.731 106.031 1.00 42.38 O
ATOM 2 P U B2372 67.033 100.110 104.505 1.00 41.85 P
ATOM 3 OP1 U B2372 67.305 98.881 103.714 1.00 41.88 O
ATOM 4 OP2 U B2372 67.728 101.377 104.161 1.00 40.85 O
ATOM 5 O5' U B2372 65.467 100.387 104.496 1.00 42.05 O
ATOM 6 C5' U B2372 64.519 99.352 104.818 1.00 39.75 C
ATOM 7 C4' U B2372 63.128 99.930 104.872 1.00 38.38 C
ATOM 8 O4' U B2372 63.084 100.962 105.885 1.00 39.91 O
ATOM 9 C3' U B2372 62.695 100.664 103.615 1.00 38.45 C
ATOM 10 O3' U B2372 62.211 99.723 102.663 1.00 40.24 O
ATOM 11 C2' U B2372 61.589 101.583 104.130 1.00 39.03 C
ATOM 12 O2' U B2372 60.328 100.951 104.229 1.00 39.95 O
ATOM 13 C1' U B2372 62.082 101.905 105.545 1.00 39.24 C
ATOM 14 N1 U B2372 62.591 103.269 105.770 1.00 38.04 N
ATOM 15 C2 U B2372 61.666 104.244 106.107 1.00 39.03 C
ATOM 16 O2 U B2372 60.472 104.018 106.217 1.00 41.70 O
ATOM 17 N3 U B2372 62.189 105.497 106.310 1.00 37.81 N
ATOM 18 C4 U B2372 63.509 105.873 106.209 1.00 36.64 C
ATOM 19 O4 U B2372 63.818 107.050 106.397 1.00 33.19 O
ATOM 20 C5 U B2372 64.404 104.812 105.856 1.00 36.63 C
ATOM 21 C6 U B2372 63.927 103.578 105.654 1.00 36.25 C
ATOM 22 P A B2373 62.493 99.942 101.097 1.00 40.81 P
ATOM 23 OP1 A B2373 62.003 98.718 100.402 1.00 41.35 O
ATOM 24 OP2 A B2373 63.896 100.386 100.906 1.00 39.79 O
ATOM 25 O5' A B2373 61.529 101.142 100.693 1.00 41.52 O
TER
Atoms:
OP1: (70.073,93.974,97.869)
OP2: (68.152,93.011,96.451)
C3': (67.841,98.598,99.170)
C1': (65.867,97.579,99.926)
C5': (68.512,96.410,98.123)
O6: (64.063,92.887,103.211)
O4': (66.206,96.933,98.714)
C8: (64.268,96.907,101.764)
C2: (66.397,93.282,100.549)
C6: (64.708,93.462,102.322)
C5: (64.666,94.825,101.952)
C4: (65.494,95.269,100.943)
P: (68.992,94.169,96.872)
C4': (67.461,97.484,98.211)
C2': (67.177,98.151,100.462)
O2': (66.941,99.218,101.350)
N1: (65.619,92.747,101.547)
N2: (67.203,92.429,99.905)
N3: (66.379,94.561,100.206)
N7: (63.899,95.866,102.456)
N9: (65.237,96.621,100.831)
O5': (68.013,95.303,97.390)
O3': (67.265,99.809,98.715)
OP2: (68.152,93.011,96.451)
C3': (67.841,98.598,99.170)
C1': (65.867,97.579,99.926)
C5': (68.512,96.410,98.123)
O6: (64.063,92.887,103.211)
O4': (66.206,96.933,98.714)
C8: (64.268,96.907,101.764)
C2: (66.397,93.282,100.549)
C6: (64.708,93.462,102.322)
C5: (64.666,94.825,101.952)
C4: (65.494,95.269,100.943)
P: (68.992,94.169,96.872)
C4': (67.461,97.484,98.211)
C2': (67.177,98.151,100.462)
O2': (66.941,99.218,101.350)
N1: (65.619,92.747,101.547)
N2: (67.203,92.429,99.905)
N3: (66.379,94.561,100.206)
N7: (63.899,95.866,102.456)
N9: (65.237,96.621,100.831)
O5': (68.013,95.303,97.390)
O3': (67.265,99.809,98.715)
C4: (63.509,105.873,106.209)
N3: (62.189,105.497,106.310)
OP1: (67.305,98.881,103.714)
OP2: (67.728,101.377,104.161)
C2: (61.666,104.244,106.107)
C1': (62.082,101.905,105.545)
C3': (62.695,100.664,103.615)
O5': (65.467,100.387,104.496)
O4': (63.084,100.962,105.885)
C5': (64.519,99.352,104.818)
P: (67.033,100.110,104.505)
C4': (63.128,99.930,104.872)
C2': (61.589,101.583,104.130)
O2': (60.328,100.951,104.229)
N1: (62.591,103.269,105.770)
O4: (63.818,107.050,106.397)
O2: (60.472,104.018,106.217)
C6: (63.927,103.578,105.654)
C5: (64.404,104.812,105.856)
O3': (62.211,99.723,102.663)
N3: (62.189,105.497,106.310)
OP1: (67.305,98.881,103.714)
OP2: (67.728,101.377,104.161)
C2: (61.666,104.244,106.107)
C1': (62.082,101.905,105.545)
C3': (62.695,100.664,103.615)
O5': (65.467,100.387,104.496)
O4': (63.084,100.962,105.885)
C5': (64.519,99.352,104.818)
P: (67.033,100.110,104.505)
C4': (63.128,99.930,104.872)
C2': (61.589,101.583,104.130)
O2': (60.328,100.951,104.229)
N1: (62.591,103.269,105.770)
O4: (63.818,107.050,106.397)
O2: (60.472,104.018,106.217)
C6: (63.927,103.578,105.654)
C5: (64.404,104.812,105.856)
O3': (62.211,99.723,102.663)
Image (generated by PyMOL):