ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VC0:B21:B42

Extra

PDB:
ATOM 1 O3' U A 20 33.587 79.124 76.437 1.00 76.16 O
ATOM 2 P C A 21 33.950 77.833 75.535 1.00 76.08 P
ATOM 3 OP1 C A 21 34.519 78.311 74.241 1.00 72.30 O
ATOM 4 OP2 C A 21 32.757 76.934 75.536 1.00 73.42 O
ATOM 5 O5' C A 21 35.103 77.086 76.344 1.00 74.11 O
ATOM 6 C5' C A 21 34.794 76.179 77.395 1.00 73.86 C
ATOM 7 C4' C A 21 36.063 75.595 77.959 1.00 74.73 C
ATOM 8 O4' C A 21 36.663 74.676 77.017 1.00 74.21 O
ATOM 9 C3' C A 21 37.149 76.605 78.265 1.00 75.83 C
ATOM 10 O3' C A 21 36.931 77.163 79.554 1.00 78.43 O
ATOM 11 C2' C A 21 38.421 75.767 78.199 1.00 75.05 C
ATOM 12 O2' C A 21 38.660 75.086 79.414 1.00 78.14 O
ATOM 13 C1' C A 21 38.067 74.734 77.127 1.00 73.18 C
ATOM 14 N1 C A 21 38.612 75.012 75.796 1.00 71.29 N
ATOM 15 C2 C A 21 39.983 74.872 75.590 1.00 70.73 C
ATOM 16 O2 C A 21 40.701 74.529 76.534 1.00 71.21 O
ATOM 17 N3 C A 21 40.491 75.109 74.365 1.00 69.11 N
ATOM 18 C4 C A 21 39.689 75.474 73.375 1.00 68.85 C
ATOM 19 N4 C A 21 40.239 75.691 72.187 1.00 68.83 N
ATOM 20 C5 C A 21 38.287 75.632 73.558 1.00 68.59 C
ATOM 21 C6 C A 21 37.793 75.392 74.772 1.00 70.04 C
ATOM 22 P C A 22 37.408 78.663 79.862 1.00 78.38 P
ATOM 23 OP1 C A 22 36.960 78.973 81.243 1.00 78.51 O
ATOM 24 OP2 C A 22 36.983 79.536 78.740 1.00 78.46 O
ATOM 25 O5' C A 22 38.998 78.567 79.862 1.00 79.20 O
TER

ATOM 1 O3' C B 41 44.179 66.247 79.376 1.00 86.48 O
ATOM 2 P A B 42 44.804 65.409 80.594 1.00 87.23 P
ATOM 3 OP1 A B 42 46.221 65.824 80.782 1.00 86.82 O
ATOM 4 OP2 A B 42 44.482 63.980 80.362 1.00 88.57 O
ATOM 5 O5' A B 42 43.958 65.908 81.846 1.00 85.49 O
ATOM 6 C5' A B 42 44.591 66.448 82.995 1.00 83.30 C
ATOM 7 C4' A B 42 43.722 67.523 83.595 1.00 82.42 C
ATOM 8 O4' A B 42 44.079 68.828 83.079 1.00 82.65 O
ATOM 9 C3' A B 42 42.237 67.391 83.309 1.00 81.48 C
ATOM 10 O3' A B 42 41.604 66.474 84.181 1.00 80.15 O
ATOM 11 C2' A B 42 41.726 68.814 83.496 1.00 81.84 C
ATOM 12 O2' A B 42 41.446 69.124 84.845 1.00 80.76 O
ATOM 13 C1' A B 42 42.918 69.644 83.011 1.00 81.88 C
ATOM 14 N9 A B 42 42.760 70.115 81.636 1.00 80.79 N
ATOM 15 C8 A B 42 43.516 69.786 80.536 1.00 80.73 C
ATOM 16 N7 A B 42 43.129 70.377 79.432 1.00 80.41 N
ATOM 17 C5 A B 42 42.041 71.148 79.830 1.00 80.05 C
ATOM 18 C6 A B 42 41.181 72.017 79.123 1.00 79.79 C
ATOM 19 N6 A B 42 41.284 72.268 77.813 1.00 78.61 N
ATOM 20 N1 A B 42 40.197 72.626 79.819 1.00 79.48 N
ATOM 21 C2 A B 42 40.092 72.377 81.129 1.00 79.16 C
ATOM 22 N3 A B 42 40.837 71.589 81.902 1.00 79.53 N
ATOM 23 C4 A B 42 41.806 70.995 81.183 1.00 79.54 C
ATOM 24 P A B 43 40.302 65.685 83.681 1.00 79.75 P
ATOM 25 OP1 A B 43 39.988 64.594 84.640 1.00 80.85 O
ATOM 26 OP2 A B 43 40.534 65.366 82.252 1.00 79.21 O
ATOM 27 O5' A B 43 39.142 66.766 83.787 1.00 78.26 O
TER

Atoms:
C2: (39.983,74.872,75.590)
OP1: (34.519,78.311,74.241)
OP2: (32.757,76.934,75.536)
C4: (39.689,75.474,73.375)
O5': (35.103,77.086,76.344)
C3': (37.149,76.605,78.265)
C1': (38.067,74.734,77.127)
O4': (36.663,74.676,77.017)
C5': (34.794,76.179,77.395)
P: (33.950,77.833,75.535)
O2: (40.701,74.529,76.534)
C4': (36.063,75.595,77.959)
C2': (38.421,75.767,78.199)
O2': (38.660,75.086,79.414)
N1: (38.612,75.012,75.796)
N3: (40.491,75.109,74.365)
N4: (40.239,75.691,72.187)
C6: (37.793,75.392,74.772)
C5: (38.287,75.632,73.558)
O3': (36.931,77.163,79.554)
OP1: (46.221,65.824,80.782)
OP2: (44.482,63.980,80.362)
C3': (42.237,67.391,83.309)
C1': (42.918,69.644,83.011)
C5': (44.591,66.448,82.995)
O4': (44.079,68.828,83.079)
C8: (43.516,69.786,80.536)
O2': (41.446,69.124,84.845)
C6: (41.181,72.017,79.123)
C5: (42.041,71.148,79.830)
C4: (41.806,70.995,81.183)
P: (44.804,65.409,80.594)
C4': (43.722,67.523,83.595)
C2': (41.726,68.814,83.496)
C2: (40.092,72.377,81.129)
N1: (40.197,72.626,79.819)
N3: (40.837,71.589,81.902)
N6: (41.284,72.268,77.813)
N7: (43.129,70.377,79.432)
N9: (42.760,70.115,81.636)
O5': (43.958,65.908,81.846)
O3': (41.604,66.474,84.181)
Image (generated by PyMOL):
PyMOL image
show in jmol