Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A498:A479
Extra
PDB:
ATOM 1 O3' G A 497 -2.325 147.613 227.464 1.00 12.22 O
ATOM 2 P U A 498 -3.421 148.771 227.445 1.00 7.45 P
ATOM 3 OP1 U A 498 -2.937 149.862 228.345 1.00 7.45 O
ATOM 4 OP2 U A 498 -4.733 148.124 227.730 1.00 7.45 O
ATOM 5 O5' U A 498 -3.378 149.252 225.938 1.00 7.45 O
ATOM 6 C5' U A 498 -2.333 150.063 225.461 1.00 7.45 C
ATOM 7 C4' U A 498 -2.823 150.934 224.355 1.00 7.45 C
ATOM 8 O4' U A 498 -3.185 150.101 223.205 1.00 7.45 O
ATOM 9 C3' U A 498 -4.096 151.722 224.657 1.00 7.45 C
ATOM 10 O3' U A 498 -3.861 152.903 225.409 1.00 7.45 O
ATOM 11 C2' U A 498 -4.659 151.975 223.257 1.00 7.45 C
ATOM 12 O2' U A 498 -3.971 153.045 222.607 1.00 7.45 O
ATOM 13 C1' U A 498 -4.314 150.650 222.549 1.00 7.45 C
ATOM 14 N1 U A 498 -5.426 149.695 222.645 1.00 7.07 N
ATOM 15 C2 U A 498 -6.229 149.540 221.568 1.00 7.07 C
ATOM 16 O2 U A 498 -6.012 150.125 220.524 1.00 7.07 O
ATOM 17 N3 U A 498 -7.278 148.677 221.729 1.00 7.07 N
ATOM 18 C4 U A 498 -7.627 147.963 222.848 1.00 7.07 C
ATOM 19 O4 U A 498 -8.619 147.211 222.854 1.00 7.07 O
ATOM 20 C5 U A 498 -6.737 148.206 223.935 1.00 7.07 C
ATOM 21 C6 U A 498 -5.709 149.046 223.795 1.00 7.07 C
ATOM 22 P G A 499 -5.096 153.741 226.024 1.00 7.91 P
ATOM 23 OP1 G A 499 -4.616 155.112 226.298 1.00 7.91 O
ATOM 24 OP2 G A 499 -5.662 152.940 227.143 1.00 7.91 O
ATOM 25 O5' G A 499 -6.118 153.798 224.824 1.00 7.91 O
TER
ATOM 1 O3' A B 478 0.851 155.245 214.327 1.00 10.63 O
ATOM 2 P A B 479 1.486 156.105 215.520 1.00 0.96 P
ATOM 3 OP1 A B 479 1.470 157.542 215.105 1.00 0.96 O
ATOM 4 OP2 A B 479 2.795 155.475 215.841 1.00 0.96 O
ATOM 5 O5' A B 479 0.446 155.850 216.709 1.00 0.96 O
ATOM 6 C5' A B 479 0.911 155.628 218.018 1.00 0.96 C
ATOM 7 C4' A B 479 -0.148 155.053 218.929 1.00 0.96 C
ATOM 8 O4' A B 479 -1.314 155.906 218.984 1.00 0.96 O
ATOM 9 C3' A B 479 -0.743 153.703 218.571 1.00 0.96 C
ATOM 10 O3' A B 479 0.155 152.624 218.775 1.00 0.96 O
ATOM 11 C2' A B 479 -1.961 153.670 219.496 1.00 0.96 C
ATOM 12 O2' A B 479 -1.582 153.296 220.809 1.00 0.96 O
ATOM 13 C1' A B 479 -2.384 155.147 219.515 1.00 0.96 C
ATOM 14 N9 A B 479 -3.593 155.370 218.731 1.00 0.92 N
ATOM 15 C8 A B 479 -3.951 156.170 217.689 1.00 0.92 C
ATOM 16 N7 A B 479 -5.200 156.000 217.339 1.00 0.92 N
ATOM 17 C5 A B 479 -5.661 155.025 218.204 1.00 0.92 C
ATOM 18 C6 A B 479 -6.890 154.362 218.357 1.00 0.92 C
ATOM 19 N6 A B 479 -7.962 154.592 217.618 1.00 0.92 N
ATOM 20 N1 A B 479 -7.004 153.447 219.333 1.00 0.92 N
ATOM 21 C2 A B 479 -5.922 153.219 220.096 1.00 0.92 C
ATOM 22 N3 A B 479 -4.698 153.759 220.048 1.00 0.92 N
ATOM 23 C4 A B 479 -4.665 154.653 219.064 1.00 0.92 C
ATOM 24 P G B 480 -0.139 151.158 218.142 1.00 13.41 P
ATOM 25 OP1 G B 480 -1.544 150.792 218.478 1.00 13.41 O
ATOM 26 OP2 G B 480 0.956 150.256 218.614 1.00 13.41 O
ATOM 27 O5' G B 480 -0.011 151.408 216.564 1.00 13.41 O
TER
ATOM 2 P U A 498 -3.421 148.771 227.445 1.00 7.45 P
ATOM 3 OP1 U A 498 -2.937 149.862 228.345 1.00 7.45 O
ATOM 4 OP2 U A 498 -4.733 148.124 227.730 1.00 7.45 O
ATOM 5 O5' U A 498 -3.378 149.252 225.938 1.00 7.45 O
ATOM 6 C5' U A 498 -2.333 150.063 225.461 1.00 7.45 C
ATOM 7 C4' U A 498 -2.823 150.934 224.355 1.00 7.45 C
ATOM 8 O4' U A 498 -3.185 150.101 223.205 1.00 7.45 O
ATOM 9 C3' U A 498 -4.096 151.722 224.657 1.00 7.45 C
ATOM 10 O3' U A 498 -3.861 152.903 225.409 1.00 7.45 O
ATOM 11 C2' U A 498 -4.659 151.975 223.257 1.00 7.45 C
ATOM 12 O2' U A 498 -3.971 153.045 222.607 1.00 7.45 O
ATOM 13 C1' U A 498 -4.314 150.650 222.549 1.00 7.45 C
ATOM 14 N1 U A 498 -5.426 149.695 222.645 1.00 7.07 N
ATOM 15 C2 U A 498 -6.229 149.540 221.568 1.00 7.07 C
ATOM 16 O2 U A 498 -6.012 150.125 220.524 1.00 7.07 O
ATOM 17 N3 U A 498 -7.278 148.677 221.729 1.00 7.07 N
ATOM 18 C4 U A 498 -7.627 147.963 222.848 1.00 7.07 C
ATOM 19 O4 U A 498 -8.619 147.211 222.854 1.00 7.07 O
ATOM 20 C5 U A 498 -6.737 148.206 223.935 1.00 7.07 C
ATOM 21 C6 U A 498 -5.709 149.046 223.795 1.00 7.07 C
ATOM 22 P G A 499 -5.096 153.741 226.024 1.00 7.91 P
ATOM 23 OP1 G A 499 -4.616 155.112 226.298 1.00 7.91 O
ATOM 24 OP2 G A 499 -5.662 152.940 227.143 1.00 7.91 O
ATOM 25 O5' G A 499 -6.118 153.798 224.824 1.00 7.91 O
TER
ATOM 1 O3' A B 478 0.851 155.245 214.327 1.00 10.63 O
ATOM 2 P A B 479 1.486 156.105 215.520 1.00 0.96 P
ATOM 3 OP1 A B 479 1.470 157.542 215.105 1.00 0.96 O
ATOM 4 OP2 A B 479 2.795 155.475 215.841 1.00 0.96 O
ATOM 5 O5' A B 479 0.446 155.850 216.709 1.00 0.96 O
ATOM 6 C5' A B 479 0.911 155.628 218.018 1.00 0.96 C
ATOM 7 C4' A B 479 -0.148 155.053 218.929 1.00 0.96 C
ATOM 8 O4' A B 479 -1.314 155.906 218.984 1.00 0.96 O
ATOM 9 C3' A B 479 -0.743 153.703 218.571 1.00 0.96 C
ATOM 10 O3' A B 479 0.155 152.624 218.775 1.00 0.96 O
ATOM 11 C2' A B 479 -1.961 153.670 219.496 1.00 0.96 C
ATOM 12 O2' A B 479 -1.582 153.296 220.809 1.00 0.96 O
ATOM 13 C1' A B 479 -2.384 155.147 219.515 1.00 0.96 C
ATOM 14 N9 A B 479 -3.593 155.370 218.731 1.00 0.92 N
ATOM 15 C8 A B 479 -3.951 156.170 217.689 1.00 0.92 C
ATOM 16 N7 A B 479 -5.200 156.000 217.339 1.00 0.92 N
ATOM 17 C5 A B 479 -5.661 155.025 218.204 1.00 0.92 C
ATOM 18 C6 A B 479 -6.890 154.362 218.357 1.00 0.92 C
ATOM 19 N6 A B 479 -7.962 154.592 217.618 1.00 0.92 N
ATOM 20 N1 A B 479 -7.004 153.447 219.333 1.00 0.92 N
ATOM 21 C2 A B 479 -5.922 153.219 220.096 1.00 0.92 C
ATOM 22 N3 A B 479 -4.698 153.759 220.048 1.00 0.92 N
ATOM 23 C4 A B 479 -4.665 154.653 219.064 1.00 0.92 C
ATOM 24 P G B 480 -0.139 151.158 218.142 1.00 13.41 P
ATOM 25 OP1 G B 480 -1.544 150.792 218.478 1.00 13.41 O
ATOM 26 OP2 G B 480 0.956 150.256 218.614 1.00 13.41 O
ATOM 27 O5' G B 480 -0.011 151.408 216.564 1.00 13.41 O
TER
Atoms:
C4: (-7.627,147.963,222.848)
N3: (-7.278,148.677,221.729)
OP1: (-2.937,149.862,228.345)
OP2: (-4.733,148.124,227.730)
C2: (-6.229,149.540,221.568)
C1': (-4.314,150.650,222.549)
C3': (-4.096,151.722,224.657)
O5': (-3.378,149.252,225.938)
O4': (-3.185,150.101,223.205)
C5': (-2.333,150.063,225.461)
P: (-3.421,148.771,227.445)
C4': (-2.823,150.934,224.355)
C2': (-4.659,151.975,223.257)
O2': (-3.971,153.045,222.607)
N1: (-5.426,149.695,222.645)
O4: (-8.619,147.211,222.854)
O2: (-6.012,150.125,220.524)
C6: (-5.709,149.046,223.795)
C5: (-6.737,148.206,223.935)
O3': (-3.861,152.903,225.409)
N3: (-7.278,148.677,221.729)
OP1: (-2.937,149.862,228.345)
OP2: (-4.733,148.124,227.730)
C2: (-6.229,149.540,221.568)
C1': (-4.314,150.650,222.549)
C3': (-4.096,151.722,224.657)
O5': (-3.378,149.252,225.938)
O4': (-3.185,150.101,223.205)
C5': (-2.333,150.063,225.461)
P: (-3.421,148.771,227.445)
C4': (-2.823,150.934,224.355)
C2': (-4.659,151.975,223.257)
O2': (-3.971,153.045,222.607)
N1: (-5.426,149.695,222.645)
O4: (-8.619,147.211,222.854)
O2: (-6.012,150.125,220.524)
C6: (-5.709,149.046,223.795)
C5: (-6.737,148.206,223.935)
O3': (-3.861,152.903,225.409)
OP1: (1.470,157.542,215.105)
OP2: (2.795,155.475,215.841)
C3': (-0.743,153.703,218.571)
C1': (-2.384,155.147,219.515)
C5': (0.911,155.628,218.018)
O4': (-1.314,155.906,218.984)
C8: (-3.951,156.170,217.689)
O2': (-1.582,153.296,220.809)
C6: (-6.890,154.362,218.357)
C5: (-5.661,155.025,218.204)
C4: (-4.665,154.653,219.064)
P: (1.486,156.105,215.520)
C4': (-0.148,155.053,218.929)
C2': (-1.961,153.670,219.496)
C2: (-5.922,153.219,220.096)
N1: (-7.004,153.447,219.333)
N3: (-4.698,153.759,220.048)
N6: (-7.962,154.592,217.618)
N7: (-5.200,156.000,217.339)
N9: (-3.593,155.370,218.731)
O5': (0.446,155.850,216.709)
O3': (0.155,152.624,218.775)
OP2: (2.795,155.475,215.841)
C3': (-0.743,153.703,218.571)
C1': (-2.384,155.147,219.515)
C5': (0.911,155.628,218.018)
O4': (-1.314,155.906,218.984)
C8: (-3.951,156.170,217.689)
O2': (-1.582,153.296,220.809)
C6: (-6.890,154.362,218.357)
C5: (-5.661,155.025,218.204)
C4: (-4.665,154.653,219.064)
P: (1.486,156.105,215.520)
C4': (-0.148,155.053,218.929)
C2': (-1.961,153.670,219.496)
C2: (-5.922,153.219,220.096)
N1: (-7.004,153.447,219.333)
N3: (-4.698,153.759,220.048)
N6: (-7.962,154.592,217.618)
N7: (-5.200,156.000,217.339)
N9: (-3.593,155.370,218.731)
O5': (0.446,155.850,216.709)
O3': (0.155,152.624,218.775)
Image (generated by PyMOL):