Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OH5:A1589:A1236
Extra
PDB:
ATOM 1 O3' G A1588 39.165 -70.909 -3.247 1.00 33.32 O
ATOM 2 P C A1589 40.648 -70.451 -2.785 1.00 29.60 P
ATOM 3 OP1 C A1589 40.675 -68.963 -2.701 1.00 28.51 O
ATOM 4 OP2 C A1589 41.610 -71.122 -3.695 1.00 27.36 O
ATOM 5 O5' C A1589 40.740 -71.051 -1.328 1.00 25.22 O
ATOM 6 C5' C A1589 41.249 -72.340 -1.099 1.00 22.43 C
ATOM 7 C4' C A1589 40.234 -73.221 -0.437 1.00 25.28 C
ATOM 8 O4' C A1589 40.593 -74.584 -0.674 1.00 30.19 O
ATOM 9 C3' C A1589 40.098 -73.129 1.085 1.00 21.53 C
ATOM 10 O3' C A1589 39.219 -72.092 1.491 1.00 27.88 O
ATOM 11 C2' C A1589 39.566 -74.494 1.406 1.00 26.84 C
ATOM 12 O2' C A1589 38.206 -74.600 0.990 1.00 31.42 O
ATOM 13 C1' C A1589 40.402 -75.332 0.478 1.00 28.88 C
ATOM 14 N1 C A1589 41.713 -75.609 1.038 1.00 34.71 N
ATOM 15 C2 C A1589 41.869 -76.794 1.730 1.00 38.82 C
ATOM 16 O2 C A1589 40.871 -77.518 1.859 1.00 37.12 O
ATOM 17 N3 C A1589 43.074 -77.103 2.252 1.00 35.97 N
ATOM 18 C4 C A1589 44.075 -76.274 2.070 1.00 28.84 C
ATOM 19 N4 C A1589 45.217 -76.620 2.611 1.00 28.24 N
ATOM 20 C5 C A1589 43.954 -75.062 1.344 1.00 36.80 C
ATOM 21 C6 C A1589 42.758 -74.763 0.843 1.00 33.05 C
ATOM 22 P G A1590 38.629 -71.979 3.011 1.00 34.24 P
ATOM 23 OP1 G A1590 37.187 -71.605 2.905 1.00 30.10 O
ATOM 24 OP2 G A1590 39.549 -71.068 3.766 1.00 36.16 O
ATOM 25 O5' G A1590 38.741 -73.451 3.579 1.00 35.28 O
TER
ATOM 1 O3' A B1235 30.428 -82.948 2.404 1.00 49.97 O
ATOM 2 P A B1236 31.726 -83.236 3.310 1.00 52.17 P
ATOM 3 OP1 A B1236 32.910 -83.297 2.382 1.00 32.02 O
ATOM 4 OP2 A B1236 31.414 -84.411 4.159 1.00 61.60 O
ATOM 5 O5' A B1236 31.805 -81.936 4.213 1.00 33.69 O
ATOM 6 C5' A B1236 30.628 -81.317 4.678 1.00 35.51 C
ATOM 7 C4' A B1236 30.853 -79.860 4.944 1.00 34.03 C
ATOM 8 O4' A B1236 32.182 -79.666 5.455 1.00 32.56 O
ATOM 9 C3' A B1236 30.753 -78.948 3.735 1.00 35.16 C
ATOM 10 O3' A B1236 29.422 -78.528 3.507 1.00 34.99 O
ATOM 11 C2' A B1236 31.686 -77.792 4.075 1.00 35.15 C
ATOM 12 O2' A B1236 30.991 -76.794 4.800 1.00 39.73 O
ATOM 13 C1' A B1236 32.698 -78.442 5.012 1.00 33.60 C
ATOM 14 N9 A B1236 33.986 -78.687 4.365 1.00 36.17 N
ATOM 15 C8 A B1236 34.721 -79.837 4.388 1.00 39.72 C
ATOM 16 N7 A B1236 35.857 -79.763 3.744 1.00 36.67 N
ATOM 17 C5 A B1236 35.872 -78.460 3.284 1.00 36.74 C
ATOM 18 C6 A B1236 36.814 -77.742 2.527 1.00 33.76 C
ATOM 19 N6 A B1236 37.966 -78.235 2.089 1.00 36.04 N
ATOM 20 N1 A B1236 36.535 -76.473 2.226 1.00 31.19 N
ATOM 21 C2 A B1236 35.381 -75.984 2.678 1.00 39.92 C
ATOM 22 N3 A B1236 34.408 -76.543 3.399 1.00 42.35 N
ATOM 23 C4 A B1236 34.730 -77.797 3.672 1.00 36.90 C
ATOM 24 P U B1237 28.661 -78.916 2.157 1.00 40.07 P
ATOM 25 OP1 U B1237 27.238 -78.578 2.354 1.00 56.34 O
ATOM 26 OP2 U B1237 29.032 -80.314 1.829 1.00 44.87 O
ATOM 27 O5' U B1237 29.290 -77.924 1.107 1.00 40.76 O
TER
ATOM 2 P C A1589 40.648 -70.451 -2.785 1.00 29.60 P
ATOM 3 OP1 C A1589 40.675 -68.963 -2.701 1.00 28.51 O
ATOM 4 OP2 C A1589 41.610 -71.122 -3.695 1.00 27.36 O
ATOM 5 O5' C A1589 40.740 -71.051 -1.328 1.00 25.22 O
ATOM 6 C5' C A1589 41.249 -72.340 -1.099 1.00 22.43 C
ATOM 7 C4' C A1589 40.234 -73.221 -0.437 1.00 25.28 C
ATOM 8 O4' C A1589 40.593 -74.584 -0.674 1.00 30.19 O
ATOM 9 C3' C A1589 40.098 -73.129 1.085 1.00 21.53 C
ATOM 10 O3' C A1589 39.219 -72.092 1.491 1.00 27.88 O
ATOM 11 C2' C A1589 39.566 -74.494 1.406 1.00 26.84 C
ATOM 12 O2' C A1589 38.206 -74.600 0.990 1.00 31.42 O
ATOM 13 C1' C A1589 40.402 -75.332 0.478 1.00 28.88 C
ATOM 14 N1 C A1589 41.713 -75.609 1.038 1.00 34.71 N
ATOM 15 C2 C A1589 41.869 -76.794 1.730 1.00 38.82 C
ATOM 16 O2 C A1589 40.871 -77.518 1.859 1.00 37.12 O
ATOM 17 N3 C A1589 43.074 -77.103 2.252 1.00 35.97 N
ATOM 18 C4 C A1589 44.075 -76.274 2.070 1.00 28.84 C
ATOM 19 N4 C A1589 45.217 -76.620 2.611 1.00 28.24 N
ATOM 20 C5 C A1589 43.954 -75.062 1.344 1.00 36.80 C
ATOM 21 C6 C A1589 42.758 -74.763 0.843 1.00 33.05 C
ATOM 22 P G A1590 38.629 -71.979 3.011 1.00 34.24 P
ATOM 23 OP1 G A1590 37.187 -71.605 2.905 1.00 30.10 O
ATOM 24 OP2 G A1590 39.549 -71.068 3.766 1.00 36.16 O
ATOM 25 O5' G A1590 38.741 -73.451 3.579 1.00 35.28 O
TER
ATOM 1 O3' A B1235 30.428 -82.948 2.404 1.00 49.97 O
ATOM 2 P A B1236 31.726 -83.236 3.310 1.00 52.17 P
ATOM 3 OP1 A B1236 32.910 -83.297 2.382 1.00 32.02 O
ATOM 4 OP2 A B1236 31.414 -84.411 4.159 1.00 61.60 O
ATOM 5 O5' A B1236 31.805 -81.936 4.213 1.00 33.69 O
ATOM 6 C5' A B1236 30.628 -81.317 4.678 1.00 35.51 C
ATOM 7 C4' A B1236 30.853 -79.860 4.944 1.00 34.03 C
ATOM 8 O4' A B1236 32.182 -79.666 5.455 1.00 32.56 O
ATOM 9 C3' A B1236 30.753 -78.948 3.735 1.00 35.16 C
ATOM 10 O3' A B1236 29.422 -78.528 3.507 1.00 34.99 O
ATOM 11 C2' A B1236 31.686 -77.792 4.075 1.00 35.15 C
ATOM 12 O2' A B1236 30.991 -76.794 4.800 1.00 39.73 O
ATOM 13 C1' A B1236 32.698 -78.442 5.012 1.00 33.60 C
ATOM 14 N9 A B1236 33.986 -78.687 4.365 1.00 36.17 N
ATOM 15 C8 A B1236 34.721 -79.837 4.388 1.00 39.72 C
ATOM 16 N7 A B1236 35.857 -79.763 3.744 1.00 36.67 N
ATOM 17 C5 A B1236 35.872 -78.460 3.284 1.00 36.74 C
ATOM 18 C6 A B1236 36.814 -77.742 2.527 1.00 33.76 C
ATOM 19 N6 A B1236 37.966 -78.235 2.089 1.00 36.04 N
ATOM 20 N1 A B1236 36.535 -76.473 2.226 1.00 31.19 N
ATOM 21 C2 A B1236 35.381 -75.984 2.678 1.00 39.92 C
ATOM 22 N3 A B1236 34.408 -76.543 3.399 1.00 42.35 N
ATOM 23 C4 A B1236 34.730 -77.797 3.672 1.00 36.90 C
ATOM 24 P U B1237 28.661 -78.916 2.157 1.00 40.07 P
ATOM 25 OP1 U B1237 27.238 -78.578 2.354 1.00 56.34 O
ATOM 26 OP2 U B1237 29.032 -80.314 1.829 1.00 44.87 O
ATOM 27 O5' U B1237 29.290 -77.924 1.107 1.00 40.76 O
TER
Atoms:
C2: (41.869,-76.794,1.730)
OP1: (40.675,-68.963,-2.701)
OP2: (41.610,-71.122,-3.695)
C4: (44.075,-76.274,2.070)
O5': (40.740,-71.051,-1.328)
C3': (40.098,-73.129,1.085)
C1': (40.402,-75.332,0.478)
O4': (40.593,-74.584,-0.674)
C5': (41.249,-72.340,-1.099)
P: (40.648,-70.451,-2.785)
O2: (40.871,-77.518,1.859)
C4': (40.234,-73.221,-0.437)
C2': (39.566,-74.494,1.406)
O2': (38.206,-74.600,0.990)
N1: (41.713,-75.609,1.038)
N3: (43.074,-77.103,2.252)
N4: (45.217,-76.620,2.611)
C6: (42.758,-74.763,0.843)
C5: (43.954,-75.062,1.344)
O3': (39.219,-72.092,1.491)
OP1: (40.675,-68.963,-2.701)
OP2: (41.610,-71.122,-3.695)
C4: (44.075,-76.274,2.070)
O5': (40.740,-71.051,-1.328)
C3': (40.098,-73.129,1.085)
C1': (40.402,-75.332,0.478)
O4': (40.593,-74.584,-0.674)
C5': (41.249,-72.340,-1.099)
P: (40.648,-70.451,-2.785)
O2: (40.871,-77.518,1.859)
C4': (40.234,-73.221,-0.437)
C2': (39.566,-74.494,1.406)
O2': (38.206,-74.600,0.990)
N1: (41.713,-75.609,1.038)
N3: (43.074,-77.103,2.252)
N4: (45.217,-76.620,2.611)
C6: (42.758,-74.763,0.843)
C5: (43.954,-75.062,1.344)
O3': (39.219,-72.092,1.491)
OP1: (32.910,-83.297,2.382)
OP2: (31.414,-84.411,4.159)
C3': (30.753,-78.948,3.735)
C1': (32.698,-78.442,5.012)
C5': (30.628,-81.317,4.678)
O4': (32.182,-79.666,5.455)
C8: (34.721,-79.837,4.388)
O2': (30.991,-76.794,4.800)
C6: (36.814,-77.742,2.527)
C5: (35.872,-78.460,3.284)
C4: (34.730,-77.797,3.672)
P: (31.726,-83.236,3.310)
C4': (30.853,-79.860,4.944)
C2': (31.686,-77.792,4.075)
C2: (35.381,-75.984,2.678)
N1: (36.535,-76.473,2.226)
N3: (34.408,-76.543,3.399)
N6: (37.966,-78.235,2.089)
N7: (35.857,-79.763,3.744)
N9: (33.986,-78.687,4.365)
O5': (31.805,-81.936,4.213)
O3': (29.422,-78.528,3.507)
OP2: (31.414,-84.411,4.159)
C3': (30.753,-78.948,3.735)
C1': (32.698,-78.442,5.012)
C5': (30.628,-81.317,4.678)
O4': (32.182,-79.666,5.455)
C8: (34.721,-79.837,4.388)
O2': (30.991,-76.794,4.800)
C6: (36.814,-77.742,2.527)
C5: (35.872,-78.460,3.284)
C4: (34.730,-77.797,3.672)
P: (31.726,-83.236,3.310)
C4': (30.853,-79.860,4.944)
C2': (31.686,-77.792,4.075)
C2: (35.381,-75.984,2.678)
N1: (36.535,-76.473,2.226)
N3: (34.408,-76.543,3.399)
N6: (37.966,-78.235,2.089)
N7: (35.857,-79.763,3.744)
N9: (33.986,-78.687,4.365)
O5': (31.805,-81.936,4.213)
O3': (29.422,-78.528,3.507)
Image (generated by PyMOL):