Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ6:026:0662
Extra
PDB:
ATOM 1 O3' U A 25 46.490 120.229 43.402 1.00 43.24 O
ATOM 2 P C A 26 47.242 120.101 41.993 1.00 40.83 P
ATOM 3 OP1 C A 26 48.204 118.976 42.123 1.00 39.19 O
ATOM 4 OP2 C A 26 47.724 121.437 41.581 1.00 42.59 O
ATOM 5 O5' C A 26 46.088 119.692 40.978 1.00 44.73 O
ATOM 6 C5' C A 26 45.420 118.436 41.099 1.00 43.72 C
ATOM 7 C4' C A 26 44.256 118.379 40.149 1.00 46.36 C
ATOM 8 O4' C A 26 43.325 119.449 40.460 1.00 45.21 O
ATOM 9 C3' C A 26 44.566 118.613 38.679 1.00 47.29 C
ATOM 10 O3' C A 26 45.081 117.467 38.028 1.00 48.77 O
ATOM 11 C2' C A 26 43.201 118.984 38.142 1.00 45.44 C
ATOM 12 O2' C A 26 42.373 117.846 38.068 1.00 44.26 O
ATOM 13 C1' C A 26 42.697 119.885 39.264 1.00 45.99 C
ATOM 14 N1 C A 26 43.069 121.286 39.035 1.00 48.49 N
ATOM 15 C2 C A 26 42.258 122.066 38.211 1.00 49.09 C
ATOM 16 O2 C A 26 41.276 121.545 37.666 1.00 49.04 O
ATOM 17 N3 C A 26 42.564 123.371 38.029 1.00 49.86 N
ATOM 18 C4 C A 26 43.629 123.898 38.638 1.00 48.04 C
ATOM 19 N4 C A 26 43.858 125.203 38.477 1.00 46.92 N
ATOM 20 C5 C A 26 44.492 123.115 39.452 1.00 48.40 C
ATOM 21 C6 C A 26 44.179 121.827 39.623 1.00 48.78 C
ATOM 22 P A A 27 46.143 117.653 36.839 1.00 50.91 P
ATOM 23 OP1 A A 27 46.663 116.300 36.508 1.00 49.29 O
ATOM 24 OP2 A A 27 47.089 118.727 37.232 1.00 52.71 O
ATOM 25 O5' A A 27 45.263 118.205 35.629 1.00 53.12 O
TER
ATOM 1 O3' U B 661 34.676 116.088 28.496 1.00 57.66 O
ATOM 2 P A B 662 34.845 116.529 30.039 1.00 57.59 P
ATOM 3 OP1 A B 662 33.563 117.039 30.602 1.00 57.15 O
ATOM 4 OP2 A B 662 36.064 117.383 30.101 1.00 60.36 O
ATOM 5 O5' A B 662 35.194 115.159 30.760 1.00 54.98 O
ATOM 6 C5' A B 662 36.163 114.271 30.191 1.00 52.69 C
ATOM 7 C4' A B 662 36.962 113.618 31.283 1.00 52.49 C
ATOM 8 O4' A B 662 37.815 114.613 31.906 1.00 54.25 O
ATOM 9 C3' A B 662 36.133 113.006 32.405 1.00 52.31 C
ATOM 10 O3' A B 662 36.812 111.867 32.898 1.00 51.67 O
ATOM 11 C2' A B 662 36.118 114.114 33.447 1.00 53.05 C
ATOM 12 O2' A B 662 35.949 113.645 34.764 1.00 55.78 O
ATOM 13 C1' A B 662 37.524 114.683 33.286 1.00 55.22 C
ATOM 14 N9 A B 662 37.688 116.066 33.745 1.00 54.13 N
ATOM 15 C8 A B 662 36.933 117.178 33.468 1.00 52.89 C
ATOM 16 N7 A B 662 37.359 118.267 34.057 1.00 52.61 N
ATOM 17 C5 A B 662 38.475 117.847 34.765 1.00 54.53 C
ATOM 18 C6 A B 662 39.385 118.529 35.593 1.00 53.80 C
ATOM 19 N6 A B 662 39.324 119.834 35.848 1.00 55.78 N
ATOM 20 N1 A B 662 40.378 117.812 36.154 1.00 53.05 N
ATOM 21 C2 A B 662 40.451 116.500 35.895 1.00 55.47 C
ATOM 22 N3 A B 662 39.663 115.746 35.131 1.00 55.58 N
ATOM 23 C4 A B 662 38.684 116.491 34.587 1.00 55.41 C
ATOM 24 P U B 663 36.278 110.404 32.515 1.00 52.31 P
ATOM 25 OP1 U B 663 37.143 109.394 33.185 1.00 52.70 O
ATOM 26 OP2 U B 663 36.119 110.364 31.038 1.00 53.27 O
ATOM 27 O5' U B 663 34.835 110.350 33.186 1.00 49.41 O
TER
ATOM 2 P C A 26 47.242 120.101 41.993 1.00 40.83 P
ATOM 3 OP1 C A 26 48.204 118.976 42.123 1.00 39.19 O
ATOM 4 OP2 C A 26 47.724 121.437 41.581 1.00 42.59 O
ATOM 5 O5' C A 26 46.088 119.692 40.978 1.00 44.73 O
ATOM 6 C5' C A 26 45.420 118.436 41.099 1.00 43.72 C
ATOM 7 C4' C A 26 44.256 118.379 40.149 1.00 46.36 C
ATOM 8 O4' C A 26 43.325 119.449 40.460 1.00 45.21 O
ATOM 9 C3' C A 26 44.566 118.613 38.679 1.00 47.29 C
ATOM 10 O3' C A 26 45.081 117.467 38.028 1.00 48.77 O
ATOM 11 C2' C A 26 43.201 118.984 38.142 1.00 45.44 C
ATOM 12 O2' C A 26 42.373 117.846 38.068 1.00 44.26 O
ATOM 13 C1' C A 26 42.697 119.885 39.264 1.00 45.99 C
ATOM 14 N1 C A 26 43.069 121.286 39.035 1.00 48.49 N
ATOM 15 C2 C A 26 42.258 122.066 38.211 1.00 49.09 C
ATOM 16 O2 C A 26 41.276 121.545 37.666 1.00 49.04 O
ATOM 17 N3 C A 26 42.564 123.371 38.029 1.00 49.86 N
ATOM 18 C4 C A 26 43.629 123.898 38.638 1.00 48.04 C
ATOM 19 N4 C A 26 43.858 125.203 38.477 1.00 46.92 N
ATOM 20 C5 C A 26 44.492 123.115 39.452 1.00 48.40 C
ATOM 21 C6 C A 26 44.179 121.827 39.623 1.00 48.78 C
ATOM 22 P A A 27 46.143 117.653 36.839 1.00 50.91 P
ATOM 23 OP1 A A 27 46.663 116.300 36.508 1.00 49.29 O
ATOM 24 OP2 A A 27 47.089 118.727 37.232 1.00 52.71 O
ATOM 25 O5' A A 27 45.263 118.205 35.629 1.00 53.12 O
TER
ATOM 1 O3' U B 661 34.676 116.088 28.496 1.00 57.66 O
ATOM 2 P A B 662 34.845 116.529 30.039 1.00 57.59 P
ATOM 3 OP1 A B 662 33.563 117.039 30.602 1.00 57.15 O
ATOM 4 OP2 A B 662 36.064 117.383 30.101 1.00 60.36 O
ATOM 5 O5' A B 662 35.194 115.159 30.760 1.00 54.98 O
ATOM 6 C5' A B 662 36.163 114.271 30.191 1.00 52.69 C
ATOM 7 C4' A B 662 36.962 113.618 31.283 1.00 52.49 C
ATOM 8 O4' A B 662 37.815 114.613 31.906 1.00 54.25 O
ATOM 9 C3' A B 662 36.133 113.006 32.405 1.00 52.31 C
ATOM 10 O3' A B 662 36.812 111.867 32.898 1.00 51.67 O
ATOM 11 C2' A B 662 36.118 114.114 33.447 1.00 53.05 C
ATOM 12 O2' A B 662 35.949 113.645 34.764 1.00 55.78 O
ATOM 13 C1' A B 662 37.524 114.683 33.286 1.00 55.22 C
ATOM 14 N9 A B 662 37.688 116.066 33.745 1.00 54.13 N
ATOM 15 C8 A B 662 36.933 117.178 33.468 1.00 52.89 C
ATOM 16 N7 A B 662 37.359 118.267 34.057 1.00 52.61 N
ATOM 17 C5 A B 662 38.475 117.847 34.765 1.00 54.53 C
ATOM 18 C6 A B 662 39.385 118.529 35.593 1.00 53.80 C
ATOM 19 N6 A B 662 39.324 119.834 35.848 1.00 55.78 N
ATOM 20 N1 A B 662 40.378 117.812 36.154 1.00 53.05 N
ATOM 21 C2 A B 662 40.451 116.500 35.895 1.00 55.47 C
ATOM 22 N3 A B 662 39.663 115.746 35.131 1.00 55.58 N
ATOM 23 C4 A B 662 38.684 116.491 34.587 1.00 55.41 C
ATOM 24 P U B 663 36.278 110.404 32.515 1.00 52.31 P
ATOM 25 OP1 U B 663 37.143 109.394 33.185 1.00 52.70 O
ATOM 26 OP2 U B 663 36.119 110.364 31.038 1.00 53.27 O
ATOM 27 O5' U B 663 34.835 110.350 33.186 1.00 49.41 O
TER
Atoms:
C2: (42.258,122.066,38.211)
OP1: (48.204,118.976,42.123)
OP2: (47.724,121.437,41.581)
C4: (43.629,123.898,38.638)
O5': (46.088,119.692,40.978)
C3': (44.566,118.613,38.679)
C1': (42.697,119.885,39.264)
O4': (43.325,119.449,40.460)
C5': (45.420,118.436,41.099)
P: (47.242,120.101,41.993)
O2: (41.276,121.545,37.666)
C4': (44.256,118.379,40.149)
C2': (43.201,118.984,38.142)
O2': (42.373,117.846,38.068)
N1: (43.069,121.286,39.035)
N3: (42.564,123.371,38.029)
N4: (43.858,125.203,38.477)
C6: (44.179,121.827,39.623)
C5: (44.492,123.115,39.452)
O3': (45.081,117.467,38.028)
OP1: (48.204,118.976,42.123)
OP2: (47.724,121.437,41.581)
C4: (43.629,123.898,38.638)
O5': (46.088,119.692,40.978)
C3': (44.566,118.613,38.679)
C1': (42.697,119.885,39.264)
O4': (43.325,119.449,40.460)
C5': (45.420,118.436,41.099)
P: (47.242,120.101,41.993)
O2: (41.276,121.545,37.666)
C4': (44.256,118.379,40.149)
C2': (43.201,118.984,38.142)
O2': (42.373,117.846,38.068)
N1: (43.069,121.286,39.035)
N3: (42.564,123.371,38.029)
N4: (43.858,125.203,38.477)
C6: (44.179,121.827,39.623)
C5: (44.492,123.115,39.452)
O3': (45.081,117.467,38.028)
OP1: (33.563,117.039,30.602)
OP2: (36.064,117.383,30.101)
C3': (36.133,113.006,32.405)
C1': (37.524,114.683,33.286)
C5': (36.163,114.271,30.191)
O4': (37.815,114.613,31.906)
C8: (36.933,117.178,33.468)
O2': (35.949,113.645,34.764)
C6: (39.385,118.529,35.593)
C5: (38.475,117.847,34.765)
C4: (38.684,116.491,34.587)
P: (34.845,116.529,30.039)
C4': (36.962,113.618,31.283)
C2': (36.118,114.114,33.447)
C2: (40.451,116.500,35.895)
N1: (40.378,117.812,36.154)
N3: (39.663,115.746,35.131)
N6: (39.324,119.834,35.848)
N7: (37.359,118.267,34.057)
N9: (37.688,116.066,33.745)
O5': (35.194,115.159,30.760)
O3': (36.812,111.867,32.898)
OP2: (36.064,117.383,30.101)
C3': (36.133,113.006,32.405)
C1': (37.524,114.683,33.286)
C5': (36.163,114.271,30.191)
O4': (37.815,114.613,31.906)
C8: (36.933,117.178,33.468)
O2': (35.949,113.645,34.764)
C6: (39.385,118.529,35.593)
C5: (38.475,117.847,34.765)
C4: (38.684,116.491,34.587)
P: (34.845,116.529,30.039)
C4': (36.962,113.618,31.283)
C2': (36.118,114.114,33.447)
C2: (40.451,116.500,35.895)
N1: (40.378,117.812,36.154)
N3: (39.663,115.746,35.131)
N6: (39.324,119.834,35.848)
N7: (37.359,118.267,34.057)
N9: (37.688,116.066,33.745)
O5': (35.194,115.159,30.760)
O3': (36.812,111.867,32.898)
Image (generated by PyMOL):