Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2G3S:B5:B4
Extra
PDB:
ATOM 1 O3' U A 4 2.529 5.523 7.499 1.00 3.96 O
ATOM 2 P G A 5 1.070 5.517 8.175 1.00 5.26 P
ATOM 3 OP1 G A 5 1.213 6.177 9.499 1.00 6.33 O
ATOM 4 OP2 G A 5 0.506 4.149 8.092 1.00 4.16 O
ATOM 5 O5' G A 5 0.194 6.475 7.247 1.00 2.61 O
ATOM 6 C5' G A 5 0.352 7.888 7.295 1.00 4.63 C
ATOM 7 C4' G A 5 -0.746 8.561 6.508 1.00 5.88 C
ATOM 8 O4' G A 5 -0.634 8.192 5.104 1.00 4.64 O
ATOM 9 C3' G A 5 -2.159 8.150 6.891 1.00 5.38 C
ATOM 10 O3' G A 5 -2.629 8.895 8.006 1.00 6.19 O
ATOM 11 C2' G A 5 -2.923 8.474 5.617 1.00 4.11 C
ATOM 12 O2' G A 5 -3.126 9.860 5.440 1.00 4.51 O
ATOM 13 C1' G A 5 -1.932 7.998 4.558 1.00 3.15 C
ATOM 14 N9 G A 5 -2.074 6.582 4.242 1.00 2.43 N
ATOM 15 C8 G A 5 -1.303 5.561 4.735 1.00 1.12 C
ATOM 16 N7 G A 5 -1.631 4.394 4.263 1.00 2.69 N
ATOM 17 C5 G A 5 -2.686 4.655 3.403 1.00 1.00 C
ATOM 18 C6 G A 5 -3.434 3.776 2.599 1.00 1.00 C
ATOM 19 O6 G A 5 -3.291 2.556 2.461 1.00 1.00 O
ATOM 20 N1 G A 5 -4.430 4.449 1.897 1.00 1.00 N
ATOM 21 C2 G A 5 -4.661 5.802 1.954 1.00 1.65 C
ATOM 22 N2 G A 5 -5.683 6.266 1.218 1.00 1.00 N
ATOM 23 N3 G A 5 -3.946 6.641 2.687 1.00 1.00 N
ATOM 24 C4 G A 5 -2.986 6.001 3.388 1.00 1.04 C
ATOM 25 P C A 6 -3.703 8.242 9.009 1.00 7.90 P
ATOM 26 OP1 C A 6 -3.983 9.257 10.056 1.00 9.14 O
ATOM 27 OP2 C A 6 -3.262 6.884 9.412 1.00 8.76 O
ATOM 28 O5' C A 6 -5.016 8.077 8.124 1.00 6.70 O
TER
ATOM 1 O3' G B 3 6.755 0.972 6.451 1.00 5.93 O
ATOM 2 P U B 4 5.477 1.026 7.420 1.00 6.82 P
ATOM 3 OP1 U B 4 5.989 1.353 8.771 1.00 7.81 O
ATOM 4 OP2 U B 4 4.664 -0.198 7.224 1.00 9.75 O
ATOM 5 O5' U B 4 4.633 2.271 6.892 1.00 5.94 O
ATOM 6 C5' U B 4 5.110 3.597 7.052 1.00 4.66 C
ATOM 7 C4' U B 4 4.321 4.541 6.178 1.00 3.81 C
ATOM 8 O4' U B 4 4.397 4.076 4.803 1.00 3.18 O
ATOM 9 C3' U B 4 2.823 4.614 6.445 1.00 5.10 C
ATOM 10 O3' U B 4 2.529 5.523 7.499 1.00 3.96 O
ATOM 11 C2' U B 4 2.293 5.139 5.117 1.00 4.65 C
ATOM 12 O2' U B 4 2.444 6.539 4.981 1.00 5.72 O
ATOM 13 C1' U B 4 3.193 4.398 4.125 1.00 5.51 C
ATOM 14 N1 U B 4 2.569 3.146 3.682 1.00 4.73 N
ATOM 15 C2 U B 4 1.610 3.234 2.703 1.00 7.31 C
ATOM 16 O2 U B 4 1.291 4.296 2.188 1.00 6.77 O
ATOM 17 N3 U B 4 1.041 2.039 2.341 1.00 5.74 N
ATOM 18 C4 U B 4 1.342 0.792 2.846 1.00 5.01 C
ATOM 19 O4 U B 4 0.791 -0.199 2.375 1.00 5.02 O
ATOM 20 C5 U B 4 2.352 0.788 3.860 1.00 4.08 C
ATOM 21 C6 U B 4 2.918 1.936 4.231 1.00 5.61 C
ATOM 22 P G B 5 1.070 5.517 8.175 1.00 5.26 P
ATOM 23 OP1 G B 5 1.213 6.177 9.499 1.00 6.33 O
ATOM 24 OP2 G B 5 0.506 4.149 8.092 1.00 4.16 O
ATOM 25 O5' G B 5 0.194 6.475 7.247 1.00 2.61 O
TER
ATOM 2 P G A 5 1.070 5.517 8.175 1.00 5.26 P
ATOM 3 OP1 G A 5 1.213 6.177 9.499 1.00 6.33 O
ATOM 4 OP2 G A 5 0.506 4.149 8.092 1.00 4.16 O
ATOM 5 O5' G A 5 0.194 6.475 7.247 1.00 2.61 O
ATOM 6 C5' G A 5 0.352 7.888 7.295 1.00 4.63 C
ATOM 7 C4' G A 5 -0.746 8.561 6.508 1.00 5.88 C
ATOM 8 O4' G A 5 -0.634 8.192 5.104 1.00 4.64 O
ATOM 9 C3' G A 5 -2.159 8.150 6.891 1.00 5.38 C
ATOM 10 O3' G A 5 -2.629 8.895 8.006 1.00 6.19 O
ATOM 11 C2' G A 5 -2.923 8.474 5.617 1.00 4.11 C
ATOM 12 O2' G A 5 -3.126 9.860 5.440 1.00 4.51 O
ATOM 13 C1' G A 5 -1.932 7.998 4.558 1.00 3.15 C
ATOM 14 N9 G A 5 -2.074 6.582 4.242 1.00 2.43 N
ATOM 15 C8 G A 5 -1.303 5.561 4.735 1.00 1.12 C
ATOM 16 N7 G A 5 -1.631 4.394 4.263 1.00 2.69 N
ATOM 17 C5 G A 5 -2.686 4.655 3.403 1.00 1.00 C
ATOM 18 C6 G A 5 -3.434 3.776 2.599 1.00 1.00 C
ATOM 19 O6 G A 5 -3.291 2.556 2.461 1.00 1.00 O
ATOM 20 N1 G A 5 -4.430 4.449 1.897 1.00 1.00 N
ATOM 21 C2 G A 5 -4.661 5.802 1.954 1.00 1.65 C
ATOM 22 N2 G A 5 -5.683 6.266 1.218 1.00 1.00 N
ATOM 23 N3 G A 5 -3.946 6.641 2.687 1.00 1.00 N
ATOM 24 C4 G A 5 -2.986 6.001 3.388 1.00 1.04 C
ATOM 25 P C A 6 -3.703 8.242 9.009 1.00 7.90 P
ATOM 26 OP1 C A 6 -3.983 9.257 10.056 1.00 9.14 O
ATOM 27 OP2 C A 6 -3.262 6.884 9.412 1.00 8.76 O
ATOM 28 O5' C A 6 -5.016 8.077 8.124 1.00 6.70 O
TER
ATOM 1 O3' G B 3 6.755 0.972 6.451 1.00 5.93 O
ATOM 2 P U B 4 5.477 1.026 7.420 1.00 6.82 P
ATOM 3 OP1 U B 4 5.989 1.353 8.771 1.00 7.81 O
ATOM 4 OP2 U B 4 4.664 -0.198 7.224 1.00 9.75 O
ATOM 5 O5' U B 4 4.633 2.271 6.892 1.00 5.94 O
ATOM 6 C5' U B 4 5.110 3.597 7.052 1.00 4.66 C
ATOM 7 C4' U B 4 4.321 4.541 6.178 1.00 3.81 C
ATOM 8 O4' U B 4 4.397 4.076 4.803 1.00 3.18 O
ATOM 9 C3' U B 4 2.823 4.614 6.445 1.00 5.10 C
ATOM 10 O3' U B 4 2.529 5.523 7.499 1.00 3.96 O
ATOM 11 C2' U B 4 2.293 5.139 5.117 1.00 4.65 C
ATOM 12 O2' U B 4 2.444 6.539 4.981 1.00 5.72 O
ATOM 13 C1' U B 4 3.193 4.398 4.125 1.00 5.51 C
ATOM 14 N1 U B 4 2.569 3.146 3.682 1.00 4.73 N
ATOM 15 C2 U B 4 1.610 3.234 2.703 1.00 7.31 C
ATOM 16 O2 U B 4 1.291 4.296 2.188 1.00 6.77 O
ATOM 17 N3 U B 4 1.041 2.039 2.341 1.00 5.74 N
ATOM 18 C4 U B 4 1.342 0.792 2.846 1.00 5.01 C
ATOM 19 O4 U B 4 0.791 -0.199 2.375 1.00 5.02 O
ATOM 20 C5 U B 4 2.352 0.788 3.860 1.00 4.08 C
ATOM 21 C6 U B 4 2.918 1.936 4.231 1.00 5.61 C
ATOM 22 P G B 5 1.070 5.517 8.175 1.00 5.26 P
ATOM 23 OP1 G B 5 1.213 6.177 9.499 1.00 6.33 O
ATOM 24 OP2 G B 5 0.506 4.149 8.092 1.00 4.16 O
ATOM 25 O5' G B 5 0.194 6.475 7.247 1.00 2.61 O
TER
Atoms:
OP1: (1.213,6.177,9.499)
OP2: (0.506,4.149,8.092)
C3': (-2.159,8.150,6.891)
C1': (-1.932,7.998,4.558)
C5': (0.352,7.888,7.295)
O6: (-3.291,2.556,2.461)
O4': (-0.634,8.192,5.104)
C8: (-1.303,5.561,4.735)
C2: (-4.661,5.802,1.954)
C6: (-3.434,3.776,2.599)
C5: (-2.686,4.655,3.403)
C4: (-2.986,6.001,3.388)
P: (1.070,5.517,8.175)
C4': (-0.746,8.561,6.508)
C2': (-2.923,8.474,5.617)
O2': (-3.126,9.860,5.440)
N1: (-4.430,4.449,1.897)
N2: (-5.683,6.266,1.218)
N3: (-3.946,6.641,2.687)
N7: (-1.631,4.394,4.263)
N9: (-2.074,6.582,4.242)
O5': (0.194,6.475,7.247)
O3': (-2.629,8.895,8.006)
OP2: (0.506,4.149,8.092)
C3': (-2.159,8.150,6.891)
C1': (-1.932,7.998,4.558)
C5': (0.352,7.888,7.295)
O6: (-3.291,2.556,2.461)
O4': (-0.634,8.192,5.104)
C8: (-1.303,5.561,4.735)
C2: (-4.661,5.802,1.954)
C6: (-3.434,3.776,2.599)
C5: (-2.686,4.655,3.403)
C4: (-2.986,6.001,3.388)
P: (1.070,5.517,8.175)
C4': (-0.746,8.561,6.508)
C2': (-2.923,8.474,5.617)
O2': (-3.126,9.860,5.440)
N1: (-4.430,4.449,1.897)
N2: (-5.683,6.266,1.218)
N3: (-3.946,6.641,2.687)
N7: (-1.631,4.394,4.263)
N9: (-2.074,6.582,4.242)
O5': (0.194,6.475,7.247)
O3': (-2.629,8.895,8.006)
C4: (1.342,0.792,2.846)
N3: (1.041,2.039,2.341)
OP1: (5.989,1.353,8.771)
OP2: (4.664,-0.198,7.224)
C2: (1.610,3.234,2.703)
C1': (3.193,4.398,4.125)
C3': (2.823,4.614,6.445)
O5': (4.633,2.271,6.892)
O4': (4.397,4.076,4.803)
C5': (5.110,3.597,7.052)
P: (5.477,1.026,7.420)
C4': (4.321,4.541,6.178)
C2': (2.293,5.139,5.117)
O2': (2.444,6.539,4.981)
N1: (2.569,3.146,3.682)
O4: (0.791,-0.199,2.375)
O2: (1.291,4.296,2.188)
C6: (2.918,1.936,4.231)
C5: (2.352,0.788,3.860)
O3': (2.529,5.523,7.499)
N3: (1.041,2.039,2.341)
OP1: (5.989,1.353,8.771)
OP2: (4.664,-0.198,7.224)
C2: (1.610,3.234,2.703)
C1': (3.193,4.398,4.125)
C3': (2.823,4.614,6.445)
O5': (4.633,2.271,6.892)
O4': (4.397,4.076,4.803)
C5': (5.110,3.597,7.052)
P: (5.477,1.026,7.420)
C4': (4.321,4.541,6.178)
C2': (2.293,5.139,5.117)
O2': (2.444,6.539,4.981)
N1: (2.569,3.146,3.682)
O4: (0.791,-0.199,2.375)
O2: (1.291,4.296,2.188)
C6: (2.918,1.936,4.231)
C5: (2.352,0.788,3.860)
O3': (2.529,5.523,7.499)
Image (generated by PyMOL):