Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:026:0662
Extra
PDB:
ATOM 1 O3' U A 25 46.511 120.143 43.430 1.00 29.04 O
ATOM 2 P C A 26 47.247 120.019 42.010 1.00 29.43 P
ATOM 3 OP1 C A 26 48.201 118.886 42.066 1.00 28.97 O
ATOM 4 OP2 C A 26 47.731 121.366 41.636 1.00 30.72 O
ATOM 5 O5' C A 26 46.080 119.630 41.003 1.00 29.22 O
ATOM 6 C5' C A 26 45.366 118.399 41.150 1.00 29.15 C
ATOM 7 C4' C A 26 44.193 118.360 40.206 1.00 30.98 C
ATOM 8 O4' C A 26 43.289 119.451 40.516 1.00 31.47 O
ATOM 9 C3' C A 26 44.498 118.584 38.736 1.00 31.89 C
ATOM 10 O3' C A 26 45.021 117.437 38.089 1.00 32.56 O
ATOM 11 C2' C A 26 43.135 118.985 38.203 1.00 32.10 C
ATOM 12 O2' C A 26 42.246 117.893 38.121 1.00 32.75 O
ATOM 13 C1' C A 26 42.655 119.894 39.326 1.00 32.42 C
ATOM 14 N1 C A 26 43.038 121.290 39.079 1.00 34.14 N
ATOM 15 C2 C A 26 42.216 122.073 38.277 1.00 36.13 C
ATOM 16 O2 C A 26 41.204 121.564 37.780 1.00 36.87 O
ATOM 17 N3 C A 26 42.544 123.367 38.058 1.00 37.68 N
ATOM 18 C4 C A 26 43.648 123.877 38.606 1.00 37.35 C
ATOM 19 N4 C A 26 43.922 125.159 38.380 1.00 37.79 N
ATOM 20 C5 C A 26 44.517 123.093 39.414 1.00 37.39 C
ATOM 21 C6 C A 26 44.176 121.817 39.624 1.00 35.99 C
ATOM 22 P A A 27 46.060 117.627 36.883 1.00 33.04 P
ATOM 23 OP1 A A 27 46.547 116.287 36.502 1.00 34.58 O
ATOM 24 OP2 A A 27 47.028 118.683 37.264 1.00 33.42 O
ATOM 25 O5' A A 27 45.172 118.189 35.691 1.00 33.90 O
TER
ATOM 1 O3' U B 661 34.546 115.846 28.615 1.00 45.24 O
ATOM 2 P A B 662 34.784 116.392 30.114 1.00 45.71 P
ATOM 3 OP1 A B 662 33.505 116.860 30.719 1.00 44.25 O
ATOM 4 OP2 A B 662 35.949 117.308 30.056 1.00 47.22 O
ATOM 5 O5' A B 662 35.259 115.108 30.918 1.00 42.71 O
ATOM 6 C5' A B 662 36.208 114.206 30.349 1.00 41.32 C
ATOM 7 C4' A B 662 37.019 113.559 31.436 1.00 40.28 C
ATOM 8 O4' A B 662 37.877 114.565 32.030 1.00 41.28 O
ATOM 9 C3' A B 662 36.215 112.945 32.577 1.00 40.44 C
ATOM 10 O3' A B 662 36.872 111.780 33.049 1.00 39.55 O
ATOM 11 C2' A B 662 36.248 114.040 33.636 1.00 41.44 C
ATOM 12 O2' A B 662 36.132 113.541 34.952 1.00 41.45 O
ATOM 13 C1' A B 662 37.639 114.628 33.419 1.00 42.56 C
ATOM 14 N9 A B 662 37.763 116.022 33.848 1.00 43.12 N
ATOM 15 C8 A B 662 36.979 117.100 33.511 1.00 45.13 C
ATOM 16 N7 A B 662 37.344 118.219 34.085 1.00 45.22 N
ATOM 17 C5 A B 662 38.445 117.855 34.845 1.00 44.76 C
ATOM 18 C6 A B 662 39.289 118.589 35.688 1.00 45.25 C
ATOM 19 N6 A B 662 39.150 119.892 35.917 1.00 48.02 N
ATOM 20 N1 A B 662 40.297 117.930 36.296 1.00 44.46 N
ATOM 21 C2 A B 662 40.436 116.620 36.063 1.00 44.72 C
ATOM 22 N3 A B 662 39.706 115.819 35.293 1.00 44.08 N
ATOM 23 C4 A B 662 38.715 116.508 34.705 1.00 43.59 C
ATOM 24 P U B 663 36.300 110.335 32.647 1.00 39.14 P
ATOM 25 OP1 U B 663 37.118 109.325 33.351 1.00 40.95 O
ATOM 26 OP2 U B 663 36.185 110.281 31.167 1.00 39.74 O
ATOM 27 O5' U B 663 34.836 110.305 33.271 1.00 37.55 O
TER
ATOM 2 P C A 26 47.247 120.019 42.010 1.00 29.43 P
ATOM 3 OP1 C A 26 48.201 118.886 42.066 1.00 28.97 O
ATOM 4 OP2 C A 26 47.731 121.366 41.636 1.00 30.72 O
ATOM 5 O5' C A 26 46.080 119.630 41.003 1.00 29.22 O
ATOM 6 C5' C A 26 45.366 118.399 41.150 1.00 29.15 C
ATOM 7 C4' C A 26 44.193 118.360 40.206 1.00 30.98 C
ATOM 8 O4' C A 26 43.289 119.451 40.516 1.00 31.47 O
ATOM 9 C3' C A 26 44.498 118.584 38.736 1.00 31.89 C
ATOM 10 O3' C A 26 45.021 117.437 38.089 1.00 32.56 O
ATOM 11 C2' C A 26 43.135 118.985 38.203 1.00 32.10 C
ATOM 12 O2' C A 26 42.246 117.893 38.121 1.00 32.75 O
ATOM 13 C1' C A 26 42.655 119.894 39.326 1.00 32.42 C
ATOM 14 N1 C A 26 43.038 121.290 39.079 1.00 34.14 N
ATOM 15 C2 C A 26 42.216 122.073 38.277 1.00 36.13 C
ATOM 16 O2 C A 26 41.204 121.564 37.780 1.00 36.87 O
ATOM 17 N3 C A 26 42.544 123.367 38.058 1.00 37.68 N
ATOM 18 C4 C A 26 43.648 123.877 38.606 1.00 37.35 C
ATOM 19 N4 C A 26 43.922 125.159 38.380 1.00 37.79 N
ATOM 20 C5 C A 26 44.517 123.093 39.414 1.00 37.39 C
ATOM 21 C6 C A 26 44.176 121.817 39.624 1.00 35.99 C
ATOM 22 P A A 27 46.060 117.627 36.883 1.00 33.04 P
ATOM 23 OP1 A A 27 46.547 116.287 36.502 1.00 34.58 O
ATOM 24 OP2 A A 27 47.028 118.683 37.264 1.00 33.42 O
ATOM 25 O5' A A 27 45.172 118.189 35.691 1.00 33.90 O
TER
ATOM 1 O3' U B 661 34.546 115.846 28.615 1.00 45.24 O
ATOM 2 P A B 662 34.784 116.392 30.114 1.00 45.71 P
ATOM 3 OP1 A B 662 33.505 116.860 30.719 1.00 44.25 O
ATOM 4 OP2 A B 662 35.949 117.308 30.056 1.00 47.22 O
ATOM 5 O5' A B 662 35.259 115.108 30.918 1.00 42.71 O
ATOM 6 C5' A B 662 36.208 114.206 30.349 1.00 41.32 C
ATOM 7 C4' A B 662 37.019 113.559 31.436 1.00 40.28 C
ATOM 8 O4' A B 662 37.877 114.565 32.030 1.00 41.28 O
ATOM 9 C3' A B 662 36.215 112.945 32.577 1.00 40.44 C
ATOM 10 O3' A B 662 36.872 111.780 33.049 1.00 39.55 O
ATOM 11 C2' A B 662 36.248 114.040 33.636 1.00 41.44 C
ATOM 12 O2' A B 662 36.132 113.541 34.952 1.00 41.45 O
ATOM 13 C1' A B 662 37.639 114.628 33.419 1.00 42.56 C
ATOM 14 N9 A B 662 37.763 116.022 33.848 1.00 43.12 N
ATOM 15 C8 A B 662 36.979 117.100 33.511 1.00 45.13 C
ATOM 16 N7 A B 662 37.344 118.219 34.085 1.00 45.22 N
ATOM 17 C5 A B 662 38.445 117.855 34.845 1.00 44.76 C
ATOM 18 C6 A B 662 39.289 118.589 35.688 1.00 45.25 C
ATOM 19 N6 A B 662 39.150 119.892 35.917 1.00 48.02 N
ATOM 20 N1 A B 662 40.297 117.930 36.296 1.00 44.46 N
ATOM 21 C2 A B 662 40.436 116.620 36.063 1.00 44.72 C
ATOM 22 N3 A B 662 39.706 115.819 35.293 1.00 44.08 N
ATOM 23 C4 A B 662 38.715 116.508 34.705 1.00 43.59 C
ATOM 24 P U B 663 36.300 110.335 32.647 1.00 39.14 P
ATOM 25 OP1 U B 663 37.118 109.325 33.351 1.00 40.95 O
ATOM 26 OP2 U B 663 36.185 110.281 31.167 1.00 39.74 O
ATOM 27 O5' U B 663 34.836 110.305 33.271 1.00 37.55 O
TER
Atoms:
C2: (42.216,122.073,38.277)
OP1: (48.201,118.886,42.066)
OP2: (47.731,121.366,41.636)
C4: (43.648,123.877,38.606)
O5': (46.080,119.630,41.003)
C3': (44.498,118.584,38.736)
C1': (42.655,119.894,39.326)
O4': (43.289,119.451,40.516)
C5': (45.366,118.399,41.150)
P: (47.247,120.019,42.010)
O2: (41.204,121.564,37.780)
C4': (44.193,118.360,40.206)
C2': (43.135,118.985,38.203)
O2': (42.246,117.893,38.121)
N1: (43.038,121.290,39.079)
N3: (42.544,123.367,38.058)
N4: (43.922,125.159,38.380)
C6: (44.176,121.817,39.624)
C5: (44.517,123.093,39.414)
O3': (45.021,117.437,38.089)
OP1: (48.201,118.886,42.066)
OP2: (47.731,121.366,41.636)
C4: (43.648,123.877,38.606)
O5': (46.080,119.630,41.003)
C3': (44.498,118.584,38.736)
C1': (42.655,119.894,39.326)
O4': (43.289,119.451,40.516)
C5': (45.366,118.399,41.150)
P: (47.247,120.019,42.010)
O2: (41.204,121.564,37.780)
C4': (44.193,118.360,40.206)
C2': (43.135,118.985,38.203)
O2': (42.246,117.893,38.121)
N1: (43.038,121.290,39.079)
N3: (42.544,123.367,38.058)
N4: (43.922,125.159,38.380)
C6: (44.176,121.817,39.624)
C5: (44.517,123.093,39.414)
O3': (45.021,117.437,38.089)
OP1: (33.505,116.860,30.719)
OP2: (35.949,117.308,30.056)
C3': (36.215,112.945,32.577)
C1': (37.639,114.628,33.419)
C5': (36.208,114.206,30.349)
O4': (37.877,114.565,32.030)
C8: (36.979,117.100,33.511)
O2': (36.132,113.541,34.952)
C6: (39.289,118.589,35.688)
C5: (38.445,117.855,34.845)
C4: (38.715,116.508,34.705)
P: (34.784,116.392,30.114)
C4': (37.019,113.559,31.436)
C2': (36.248,114.040,33.636)
C2: (40.436,116.620,36.063)
N1: (40.297,117.930,36.296)
N3: (39.706,115.819,35.293)
N6: (39.150,119.892,35.917)
N7: (37.344,118.219,34.085)
N9: (37.763,116.022,33.848)
O5': (35.259,115.108,30.918)
O3': (36.872,111.780,33.049)
OP2: (35.949,117.308,30.056)
C3': (36.215,112.945,32.577)
C1': (37.639,114.628,33.419)
C5': (36.208,114.206,30.349)
O4': (37.877,114.565,32.030)
C8: (36.979,117.100,33.511)
O2': (36.132,113.541,34.952)
C6: (39.289,118.589,35.688)
C5: (38.445,117.855,34.845)
C4: (38.715,116.508,34.705)
P: (34.784,116.392,30.114)
C4': (37.019,113.559,31.436)
C2': (36.248,114.040,33.636)
C2: (40.436,116.620,36.063)
N1: (40.297,117.930,36.296)
N3: (39.706,115.819,35.293)
N6: (39.150,119.892,35.917)
N7: (37.344,118.219,34.085)
N9: (37.763,116.022,33.848)
O5': (35.259,115.108,30.918)
O3': (36.872,111.780,33.049)
Image (generated by PyMOL):