Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02034:02679
Extra
PDB:
ATOM 1 O3' C A2033 39.170 149.999 103.120 1.00 33.33 O
ATOM 2 P C A2034 40.753 149.734 103.211 1.00 32.38 P
ATOM 3 OP1 C A2034 41.341 150.086 101.899 1.00 30.36 O
ATOM 4 OP2 C A2034 40.992 148.387 103.786 1.00 32.69 O
ATOM 5 O5' C A2034 41.253 150.782 104.292 1.00 31.95 O
ATOM 6 C5' C A2034 41.228 152.182 104.025 1.00 31.14 C
ATOM 7 C4' C A2034 41.985 152.905 105.099 1.00 31.42 C
ATOM 8 O4' C A2034 41.329 152.684 106.375 1.00 31.72 O
ATOM 9 C3' C A2034 43.392 152.388 105.331 1.00 30.63 C
ATOM 10 O3' C A2034 44.314 152.912 104.395 1.00 31.85 O
ATOM 11 C2' C A2034 43.671 152.851 106.748 1.00 31.30 C
ATOM 12 O2' C A2034 43.972 154.228 106.794 1.00 29.04 O
ATOM 13 C1' C A2034 42.309 152.607 107.404 1.00 31.69 C
ATOM 14 N1 C A2034 42.196 151.290 108.075 1.00 30.32 N
ATOM 15 C2 C A2034 42.846 151.091 109.305 1.00 28.48 C
ATOM 16 O2 C A2034 43.535 152.002 109.779 1.00 30.89 O
ATOM 17 N3 C A2034 42.712 149.912 109.938 1.00 27.17 N
ATOM 18 C4 C A2034 41.981 148.945 109.394 1.00 27.58 C
ATOM 19 N4 C A2034 41.868 147.800 110.062 1.00 26.40 N
ATOM 20 C5 C A2034 41.332 149.107 108.140 1.00 29.98 C
ATOM 21 C6 C A2034 41.464 150.283 107.519 1.00 28.58 C
ATOM 22 P A A2035 45.547 152.005 103.912 1.00 31.59 P
ATOM 23 OP1 A A2035 46.222 152.729 102.816 1.00 32.99 O
ATOM 24 OP2 A A2035 45.060 150.620 103.693 1.00 33.18 O
ATOM 25 O5' A A2035 46.520 151.998 105.165 1.00 33.90 O
TER
ATOM 1 O3' C B2678 47.424 159.360 116.106 1.00 40.79 O
ATOM 2 P A B2679 48.757 158.955 115.294 1.00 43.28 P
ATOM 3 OP1 A B2679 48.827 157.475 115.269 1.00 41.86 O
ATOM 4 OP2 A B2679 49.902 159.728 115.831 1.00 43.01 O
ATOM 5 O5' A B2679 48.477 159.463 113.810 1.00 39.53 O
ATOM 6 C5' A B2679 49.207 160.566 113.267 1.00 37.18 C
ATOM 7 C4' A B2679 49.211 160.513 111.756 1.00 37.33 C
ATOM 8 O4' A B2679 49.831 159.279 111.302 1.00 37.36 O
ATOM 9 C3' A B2679 47.860 160.513 111.067 1.00 36.79 C
ATOM 10 O3' A B2679 47.323 161.815 110.958 1.00 37.32 O
ATOM 11 C2' A B2679 48.222 159.949 109.706 1.00 36.61 C
ATOM 12 O2' A B2679 48.867 160.917 108.900 1.00 37.86 O
ATOM 13 C1' A B2679 49.201 158.842 110.107 1.00 36.18 C
ATOM 14 N9 A B2679 48.478 157.609 110.413 1.00 33.22 N
ATOM 15 C8 A B2679 48.491 156.881 111.577 1.00 32.79 C
ATOM 16 N7 A B2679 47.661 155.867 111.575 1.00 32.19 N
ATOM 17 C5 A B2679 47.076 155.921 110.319 1.00 32.08 C
ATOM 18 C6 A B2679 46.097 155.133 109.700 1.00 32.50 C
ATOM 19 N6 A B2679 45.484 154.109 110.297 1.00 32.40 N
ATOM 20 N1 A B2679 45.753 155.442 108.432 1.00 32.70 N
ATOM 21 C2 A B2679 46.349 156.486 107.842 1.00 33.38 C
ATOM 22 N3 A B2679 47.270 157.311 108.325 1.00 33.42 N
ATOM 23 C4 A B2679 47.592 156.971 109.584 1.00 32.66 C
ATOM 24 P A B2680 45.762 162.058 111.241 1.00 38.75 P
ATOM 25 OP1 A B2680 45.591 163.539 111.212 1.00 40.32 O
ATOM 26 OP2 A B2680 45.345 161.294 112.433 1.00 36.27 O
ATOM 27 O5' A B2680 45.010 161.407 109.994 1.00 37.75 O
TER
ATOM 2 P C A2034 40.753 149.734 103.211 1.00 32.38 P
ATOM 3 OP1 C A2034 41.341 150.086 101.899 1.00 30.36 O
ATOM 4 OP2 C A2034 40.992 148.387 103.786 1.00 32.69 O
ATOM 5 O5' C A2034 41.253 150.782 104.292 1.00 31.95 O
ATOM 6 C5' C A2034 41.228 152.182 104.025 1.00 31.14 C
ATOM 7 C4' C A2034 41.985 152.905 105.099 1.00 31.42 C
ATOM 8 O4' C A2034 41.329 152.684 106.375 1.00 31.72 O
ATOM 9 C3' C A2034 43.392 152.388 105.331 1.00 30.63 C
ATOM 10 O3' C A2034 44.314 152.912 104.395 1.00 31.85 O
ATOM 11 C2' C A2034 43.671 152.851 106.748 1.00 31.30 C
ATOM 12 O2' C A2034 43.972 154.228 106.794 1.00 29.04 O
ATOM 13 C1' C A2034 42.309 152.607 107.404 1.00 31.69 C
ATOM 14 N1 C A2034 42.196 151.290 108.075 1.00 30.32 N
ATOM 15 C2 C A2034 42.846 151.091 109.305 1.00 28.48 C
ATOM 16 O2 C A2034 43.535 152.002 109.779 1.00 30.89 O
ATOM 17 N3 C A2034 42.712 149.912 109.938 1.00 27.17 N
ATOM 18 C4 C A2034 41.981 148.945 109.394 1.00 27.58 C
ATOM 19 N4 C A2034 41.868 147.800 110.062 1.00 26.40 N
ATOM 20 C5 C A2034 41.332 149.107 108.140 1.00 29.98 C
ATOM 21 C6 C A2034 41.464 150.283 107.519 1.00 28.58 C
ATOM 22 P A A2035 45.547 152.005 103.912 1.00 31.59 P
ATOM 23 OP1 A A2035 46.222 152.729 102.816 1.00 32.99 O
ATOM 24 OP2 A A2035 45.060 150.620 103.693 1.00 33.18 O
ATOM 25 O5' A A2035 46.520 151.998 105.165 1.00 33.90 O
TER
ATOM 1 O3' C B2678 47.424 159.360 116.106 1.00 40.79 O
ATOM 2 P A B2679 48.757 158.955 115.294 1.00 43.28 P
ATOM 3 OP1 A B2679 48.827 157.475 115.269 1.00 41.86 O
ATOM 4 OP2 A B2679 49.902 159.728 115.831 1.00 43.01 O
ATOM 5 O5' A B2679 48.477 159.463 113.810 1.00 39.53 O
ATOM 6 C5' A B2679 49.207 160.566 113.267 1.00 37.18 C
ATOM 7 C4' A B2679 49.211 160.513 111.756 1.00 37.33 C
ATOM 8 O4' A B2679 49.831 159.279 111.302 1.00 37.36 O
ATOM 9 C3' A B2679 47.860 160.513 111.067 1.00 36.79 C
ATOM 10 O3' A B2679 47.323 161.815 110.958 1.00 37.32 O
ATOM 11 C2' A B2679 48.222 159.949 109.706 1.00 36.61 C
ATOM 12 O2' A B2679 48.867 160.917 108.900 1.00 37.86 O
ATOM 13 C1' A B2679 49.201 158.842 110.107 1.00 36.18 C
ATOM 14 N9 A B2679 48.478 157.609 110.413 1.00 33.22 N
ATOM 15 C8 A B2679 48.491 156.881 111.577 1.00 32.79 C
ATOM 16 N7 A B2679 47.661 155.867 111.575 1.00 32.19 N
ATOM 17 C5 A B2679 47.076 155.921 110.319 1.00 32.08 C
ATOM 18 C6 A B2679 46.097 155.133 109.700 1.00 32.50 C
ATOM 19 N6 A B2679 45.484 154.109 110.297 1.00 32.40 N
ATOM 20 N1 A B2679 45.753 155.442 108.432 1.00 32.70 N
ATOM 21 C2 A B2679 46.349 156.486 107.842 1.00 33.38 C
ATOM 22 N3 A B2679 47.270 157.311 108.325 1.00 33.42 N
ATOM 23 C4 A B2679 47.592 156.971 109.584 1.00 32.66 C
ATOM 24 P A B2680 45.762 162.058 111.241 1.00 38.75 P
ATOM 25 OP1 A B2680 45.591 163.539 111.212 1.00 40.32 O
ATOM 26 OP2 A B2680 45.345 161.294 112.433 1.00 36.27 O
ATOM 27 O5' A B2680 45.010 161.407 109.994 1.00 37.75 O
TER
Atoms:
C2: (42.846,151.091,109.305)
OP1: (41.341,150.086,101.899)
OP2: (40.992,148.387,103.786)
C4: (41.981,148.945,109.394)
O5': (41.253,150.782,104.292)
C3': (43.392,152.388,105.331)
C1': (42.309,152.607,107.404)
O4': (41.329,152.684,106.375)
C5': (41.228,152.182,104.025)
P: (40.753,149.734,103.211)
O2: (43.535,152.002,109.779)
C4': (41.985,152.905,105.099)
C2': (43.671,152.851,106.748)
O2': (43.972,154.228,106.794)
N1: (42.196,151.290,108.075)
N3: (42.712,149.912,109.938)
N4: (41.868,147.800,110.062)
C6: (41.464,150.283,107.519)
C5: (41.332,149.107,108.140)
O3': (44.314,152.912,104.395)
OP1: (41.341,150.086,101.899)
OP2: (40.992,148.387,103.786)
C4: (41.981,148.945,109.394)
O5': (41.253,150.782,104.292)
C3': (43.392,152.388,105.331)
C1': (42.309,152.607,107.404)
O4': (41.329,152.684,106.375)
C5': (41.228,152.182,104.025)
P: (40.753,149.734,103.211)
O2: (43.535,152.002,109.779)
C4': (41.985,152.905,105.099)
C2': (43.671,152.851,106.748)
O2': (43.972,154.228,106.794)
N1: (42.196,151.290,108.075)
N3: (42.712,149.912,109.938)
N4: (41.868,147.800,110.062)
C6: (41.464,150.283,107.519)
C5: (41.332,149.107,108.140)
O3': (44.314,152.912,104.395)
OP1: (48.827,157.475,115.269)
OP2: (49.902,159.728,115.831)
C3': (47.860,160.513,111.067)
C1': (49.201,158.842,110.107)
C5': (49.207,160.566,113.267)
O4': (49.831,159.279,111.302)
C8: (48.491,156.881,111.577)
O2': (48.867,160.917,108.900)
C6: (46.097,155.133,109.700)
C5: (47.076,155.921,110.319)
C4: (47.592,156.971,109.584)
P: (48.757,158.955,115.294)
C4': (49.211,160.513,111.756)
C2': (48.222,159.949,109.706)
C2: (46.349,156.486,107.842)
N1: (45.753,155.442,108.432)
N3: (47.270,157.311,108.325)
N6: (45.484,154.109,110.297)
N7: (47.661,155.867,111.575)
N9: (48.478,157.609,110.413)
O5': (48.477,159.463,113.810)
O3': (47.323,161.815,110.958)
OP2: (49.902,159.728,115.831)
C3': (47.860,160.513,111.067)
C1': (49.201,158.842,110.107)
C5': (49.207,160.566,113.267)
O4': (49.831,159.279,111.302)
C8: (48.491,156.881,111.577)
O2': (48.867,160.917,108.900)
C6: (46.097,155.133,109.700)
C5: (47.076,155.921,110.319)
C4: (47.592,156.971,109.584)
P: (48.757,158.955,115.294)
C4': (49.211,160.513,111.756)
C2': (48.222,159.949,109.706)
C2: (46.349,156.486,107.842)
N1: (45.753,155.442,108.432)
N3: (47.270,157.311,108.325)
N6: (45.484,154.109,110.297)
N7: (47.661,155.867,111.575)
N9: (48.478,157.609,110.413)
O5': (48.477,159.463,113.810)
O3': (47.323,161.815,110.958)
Image (generated by PyMOL):