Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02034:02679
Extra
PDB:
ATOM 1 O3' C A2033 39.218 150.029 103.061 1.00 40.22 O
ATOM 2 P C A2034 40.797 149.783 103.175 1.00 39.75 P
ATOM 3 OP1 C A2034 41.409 150.169 101.888 1.00 39.01 O
ATOM 4 OP2 C A2034 41.011 148.419 103.716 1.00 39.21 O
ATOM 5 O5' C A2034 41.265 150.807 104.294 1.00 39.65 O
ATOM 6 C5' C A2034 41.277 152.218 104.052 1.00 38.46 C
ATOM 7 C4' C A2034 42.107 152.901 105.103 1.00 38.50 C
ATOM 8 O4' C A2034 41.485 152.712 106.402 1.00 38.71 O
ATOM 9 C3' C A2034 43.490 152.308 105.281 1.00 38.11 C
ATOM 10 O3' C A2034 44.402 152.797 104.316 1.00 38.82 O
ATOM 11 C2' C A2034 43.843 152.728 106.697 1.00 38.25 C
ATOM 12 O2' C A2034 44.233 154.082 106.758 1.00 35.33 O
ATOM 13 C1' C A2034 42.491 152.557 107.397 1.00 39.13 C
ATOM 14 N1 C A2034 42.309 151.243 108.063 1.00 38.76 N
ATOM 15 C2 C A2034 42.934 151.006 109.304 1.00 38.36 C
ATOM 16 O2 C A2034 43.614 151.901 109.824 1.00 39.93 O
ATOM 17 N3 C A2034 42.776 149.807 109.903 1.00 37.66 N
ATOM 18 C4 C A2034 42.034 148.865 109.324 1.00 38.66 C
ATOM 19 N4 C A2034 41.912 147.694 109.947 1.00 39.79 N
ATOM 20 C5 C A2034 41.383 149.080 108.075 1.00 40.08 C
ATOM 21 C6 C A2034 41.545 150.269 107.485 1.00 39.47 C
ATOM 22 P A A2035 45.684 151.916 103.934 1.00 39.29 P
ATOM 23 OP1 A A2035 46.435 152.626 102.870 1.00 39.66 O
ATOM 24 OP2 A A2035 45.220 150.533 103.707 1.00 40.52 O
ATOM 25 O5' A A2035 46.564 151.955 105.259 1.00 39.57 O
TER
ATOM 1 O3' C B2678 47.587 159.332 115.974 1.00 44.29 O
ATOM 2 P A B2679 48.925 158.912 115.175 1.00 44.66 P
ATOM 3 OP1 A B2679 49.006 157.433 115.185 1.00 43.65 O
ATOM 4 OP2 A B2679 50.055 159.701 115.713 1.00 45.20 O
ATOM 5 O5' A B2679 48.647 159.380 113.676 1.00 42.52 O
ATOM 6 C5' A B2679 49.264 160.562 113.142 1.00 40.30 C
ATOM 7 C4' A B2679 49.239 160.544 111.630 1.00 39.14 C
ATOM 8 O4' A B2679 49.869 159.330 111.140 1.00 38.65 O
ATOM 9 C3' A B2679 47.879 160.537 110.965 1.00 38.96 C
ATOM 10 O3' A B2679 47.334 161.839 110.874 1.00 41.88 O
ATOM 11 C2' A B2679 48.216 159.990 109.590 1.00 38.46 C
ATOM 12 O2' A B2679 48.822 160.969 108.767 1.00 38.27 O
ATOM 13 C1' A B2679 49.219 158.893 109.958 1.00 36.68 C
ATOM 14 N9 A B2679 48.520 157.651 110.281 1.00 33.82 N
ATOM 15 C8 A B2679 48.570 156.944 111.452 1.00 33.09 C
ATOM 16 N7 A B2679 47.750 155.928 111.490 1.00 34.06 N
ATOM 17 C5 A B2679 47.133 155.952 110.251 1.00 34.50 C
ATOM 18 C6 A B2679 46.138 155.147 109.675 1.00 35.21 C
ATOM 19 N6 A B2679 45.538 154.140 110.311 1.00 34.81 N
ATOM 20 N1 A B2679 45.764 155.425 108.409 1.00 36.68 N
ATOM 21 C2 A B2679 46.346 156.456 107.780 1.00 36.74 C
ATOM 22 N3 A B2679 47.274 157.295 108.224 1.00 36.03 N
ATOM 23 C4 A B2679 47.626 156.986 109.483 1.00 34.56 C
ATOM 24 P A B2680 45.768 162.067 111.145 1.00 44.39 P
ATOM 25 OP1 A B2680 45.585 163.545 111.105 1.00 43.44 O
ATOM 26 OP2 A B2680 45.370 161.315 112.355 1.00 41.36 O
ATOM 27 O5' A B2680 45.036 161.381 109.903 1.00 41.48 O
TER
ATOM 2 P C A2034 40.797 149.783 103.175 1.00 39.75 P
ATOM 3 OP1 C A2034 41.409 150.169 101.888 1.00 39.01 O
ATOM 4 OP2 C A2034 41.011 148.419 103.716 1.00 39.21 O
ATOM 5 O5' C A2034 41.265 150.807 104.294 1.00 39.65 O
ATOM 6 C5' C A2034 41.277 152.218 104.052 1.00 38.46 C
ATOM 7 C4' C A2034 42.107 152.901 105.103 1.00 38.50 C
ATOM 8 O4' C A2034 41.485 152.712 106.402 1.00 38.71 O
ATOM 9 C3' C A2034 43.490 152.308 105.281 1.00 38.11 C
ATOM 10 O3' C A2034 44.402 152.797 104.316 1.00 38.82 O
ATOM 11 C2' C A2034 43.843 152.728 106.697 1.00 38.25 C
ATOM 12 O2' C A2034 44.233 154.082 106.758 1.00 35.33 O
ATOM 13 C1' C A2034 42.491 152.557 107.397 1.00 39.13 C
ATOM 14 N1 C A2034 42.309 151.243 108.063 1.00 38.76 N
ATOM 15 C2 C A2034 42.934 151.006 109.304 1.00 38.36 C
ATOM 16 O2 C A2034 43.614 151.901 109.824 1.00 39.93 O
ATOM 17 N3 C A2034 42.776 149.807 109.903 1.00 37.66 N
ATOM 18 C4 C A2034 42.034 148.865 109.324 1.00 38.66 C
ATOM 19 N4 C A2034 41.912 147.694 109.947 1.00 39.79 N
ATOM 20 C5 C A2034 41.383 149.080 108.075 1.00 40.08 C
ATOM 21 C6 C A2034 41.545 150.269 107.485 1.00 39.47 C
ATOM 22 P A A2035 45.684 151.916 103.934 1.00 39.29 P
ATOM 23 OP1 A A2035 46.435 152.626 102.870 1.00 39.66 O
ATOM 24 OP2 A A2035 45.220 150.533 103.707 1.00 40.52 O
ATOM 25 O5' A A2035 46.564 151.955 105.259 1.00 39.57 O
TER
ATOM 1 O3' C B2678 47.587 159.332 115.974 1.00 44.29 O
ATOM 2 P A B2679 48.925 158.912 115.175 1.00 44.66 P
ATOM 3 OP1 A B2679 49.006 157.433 115.185 1.00 43.65 O
ATOM 4 OP2 A B2679 50.055 159.701 115.713 1.00 45.20 O
ATOM 5 O5' A B2679 48.647 159.380 113.676 1.00 42.52 O
ATOM 6 C5' A B2679 49.264 160.562 113.142 1.00 40.30 C
ATOM 7 C4' A B2679 49.239 160.544 111.630 1.00 39.14 C
ATOM 8 O4' A B2679 49.869 159.330 111.140 1.00 38.65 O
ATOM 9 C3' A B2679 47.879 160.537 110.965 1.00 38.96 C
ATOM 10 O3' A B2679 47.334 161.839 110.874 1.00 41.88 O
ATOM 11 C2' A B2679 48.216 159.990 109.590 1.00 38.46 C
ATOM 12 O2' A B2679 48.822 160.969 108.767 1.00 38.27 O
ATOM 13 C1' A B2679 49.219 158.893 109.958 1.00 36.68 C
ATOM 14 N9 A B2679 48.520 157.651 110.281 1.00 33.82 N
ATOM 15 C8 A B2679 48.570 156.944 111.452 1.00 33.09 C
ATOM 16 N7 A B2679 47.750 155.928 111.490 1.00 34.06 N
ATOM 17 C5 A B2679 47.133 155.952 110.251 1.00 34.50 C
ATOM 18 C6 A B2679 46.138 155.147 109.675 1.00 35.21 C
ATOM 19 N6 A B2679 45.538 154.140 110.311 1.00 34.81 N
ATOM 20 N1 A B2679 45.764 155.425 108.409 1.00 36.68 N
ATOM 21 C2 A B2679 46.346 156.456 107.780 1.00 36.74 C
ATOM 22 N3 A B2679 47.274 157.295 108.224 1.00 36.03 N
ATOM 23 C4 A B2679 47.626 156.986 109.483 1.00 34.56 C
ATOM 24 P A B2680 45.768 162.067 111.145 1.00 44.39 P
ATOM 25 OP1 A B2680 45.585 163.545 111.105 1.00 43.44 O
ATOM 26 OP2 A B2680 45.370 161.315 112.355 1.00 41.36 O
ATOM 27 O5' A B2680 45.036 161.381 109.903 1.00 41.48 O
TER
Atoms:
C2: (42.934,151.006,109.304)
OP1: (41.409,150.169,101.888)
OP2: (41.011,148.419,103.716)
C4: (42.034,148.865,109.324)
O5': (41.265,150.807,104.294)
C3': (43.490,152.308,105.281)
C1': (42.491,152.557,107.397)
O4': (41.485,152.712,106.402)
C5': (41.277,152.218,104.052)
P: (40.797,149.783,103.175)
O2: (43.614,151.901,109.824)
C4': (42.107,152.901,105.103)
C2': (43.843,152.728,106.697)
O2': (44.233,154.082,106.758)
N1: (42.309,151.243,108.063)
N3: (42.776,149.807,109.903)
N4: (41.912,147.694,109.947)
C6: (41.545,150.269,107.485)
C5: (41.383,149.080,108.075)
O3': (44.402,152.797,104.316)
OP1: (41.409,150.169,101.888)
OP2: (41.011,148.419,103.716)
C4: (42.034,148.865,109.324)
O5': (41.265,150.807,104.294)
C3': (43.490,152.308,105.281)
C1': (42.491,152.557,107.397)
O4': (41.485,152.712,106.402)
C5': (41.277,152.218,104.052)
P: (40.797,149.783,103.175)
O2: (43.614,151.901,109.824)
C4': (42.107,152.901,105.103)
C2': (43.843,152.728,106.697)
O2': (44.233,154.082,106.758)
N1: (42.309,151.243,108.063)
N3: (42.776,149.807,109.903)
N4: (41.912,147.694,109.947)
C6: (41.545,150.269,107.485)
C5: (41.383,149.080,108.075)
O3': (44.402,152.797,104.316)
OP1: (49.006,157.433,115.185)
OP2: (50.055,159.701,115.713)
C3': (47.879,160.537,110.965)
C1': (49.219,158.893,109.958)
C5': (49.264,160.562,113.142)
O4': (49.869,159.330,111.140)
C8: (48.570,156.944,111.452)
O2': (48.822,160.969,108.767)
C6: (46.138,155.147,109.675)
C5: (47.133,155.952,110.251)
C4: (47.626,156.986,109.483)
P: (48.925,158.912,115.175)
C4': (49.239,160.544,111.630)
C2': (48.216,159.990,109.590)
C2: (46.346,156.456,107.780)
N1: (45.764,155.425,108.409)
N3: (47.274,157.295,108.224)
N6: (45.538,154.140,110.311)
N7: (47.750,155.928,111.490)
N9: (48.520,157.651,110.281)
O5': (48.647,159.380,113.676)
O3': (47.334,161.839,110.874)
OP2: (50.055,159.701,115.713)
C3': (47.879,160.537,110.965)
C1': (49.219,158.893,109.958)
C5': (49.264,160.562,113.142)
O4': (49.869,159.330,111.140)
C8: (48.570,156.944,111.452)
O2': (48.822,160.969,108.767)
C6: (46.138,155.147,109.675)
C5: (47.133,155.952,110.251)
C4: (47.626,156.986,109.483)
P: (48.925,158.912,115.175)
C4': (49.239,160.544,111.630)
C2': (48.216,159.990,109.590)
C2: (46.346,156.456,107.780)
N1: (45.764,155.425,108.409)
N3: (47.274,157.295,108.224)
N6: (45.538,154.140,110.311)
N7: (47.750,155.928,111.490)
N9: (48.520,157.651,110.281)
O5': (48.647,159.380,113.676)
O3': (47.334,161.839,110.874)
Image (generated by PyMOL):