ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQK:01042:01083

Extra

PDB:
ATOM 1 O3' A A1041 38.227 94.958 103.344 1.00 41.80 O
ATOM 2 P C A1042 39.102 94.105 104.394 1.00 43.26 P
ATOM 3 OP1 C A1042 40.496 94.653 104.424 1.00 42.85 O
ATOM 4 OP2 C A1042 38.893 92.674 104.082 1.00 45.15 O
ATOM 5 O5' C A1042 38.433 94.383 105.812 1.00 40.93 O
ATOM 6 C5' C A1042 38.931 93.702 106.989 1.00 38.49 C
ATOM 7 C4' C A1042 37.956 93.828 108.128 1.00 36.78 C
ATOM 8 O4' C A1042 37.958 95.182 108.653 1.00 34.82 O
ATOM 9 C3' C A1042 36.503 93.559 107.783 1.00 35.08 C
ATOM 10 O3' C A1042 36.246 92.164 107.731 1.00 37.99 O
ATOM 11 C2' C A1042 35.787 94.277 108.919 1.00 35.04 C
ATOM 12 O2' C A1042 35.857 93.558 110.137 1.00 34.42 O
ATOM 13 C1' C A1042 36.644 95.540 109.051 1.00 33.33 C
ATOM 14 N1 C A1042 36.174 96.646 108.186 1.00 34.20 N
ATOM 15 C2 C A1042 34.959 97.275 108.498 1.00 32.54 C
ATOM 16 O2 C A1042 34.315 96.880 109.484 1.00 32.86 O
ATOM 17 N3 C A1042 34.520 98.290 107.717 1.00 30.66 N
ATOM 18 C4 C A1042 35.239 98.682 106.658 1.00 32.17 C
ATOM 19 N4 C A1042 34.766 99.695 105.917 1.00 29.49 N
ATOM 20 C5 C A1042 36.472 98.058 106.313 1.00 32.59 C
ATOM 21 C6 C A1042 36.899 97.054 107.096 1.00 33.36 C
ATOM 22 P C A1043 34.938 91.617 106.970 1.00 40.36 P
ATOM 23 OP1 C A1043 34.952 90.143 107.119 1.00 42.20 O
ATOM 24 OP2 C A1043 34.846 92.213 105.612 1.00 42.49 O
ATOM 25 O5' C A1043 33.727 92.194 107.821 1.00 37.99 O
TER

ATOM 1 O3' A B1082 36.080 99.106 121.075 1.00 58.43 O
ATOM 2 P A B1083 34.841 98.475 120.257 1.00 59.32 P
ATOM 3 OP1 A B1083 35.098 98.830 118.835 1.00 59.91 O
ATOM 4 OP2 A B1083 33.549 98.857 120.887 1.00 60.22 O
ATOM 5 O5' A B1083 35.025 96.904 120.430 1.00 55.34 O
ATOM 6 C5' A B1083 36.266 96.295 120.091 1.00 49.33 C
ATOM 7 C4' A B1083 36.053 94.895 119.594 1.00 46.91 C
ATOM 8 O4' A B1083 34.841 94.808 118.802 1.00 44.97 O
ATOM 9 C3' A B1083 37.159 94.498 118.645 1.00 45.86 C
ATOM 10 O3' A B1083 38.310 94.090 119.353 1.00 44.85 O
ATOM 11 C2' A B1083 36.499 93.453 117.762 1.00 44.92 C
ATOM 12 O2' A B1083 36.438 92.165 118.336 1.00 45.96 O
ATOM 13 C1' A B1083 35.090 94.038 117.632 1.00 42.80 C
ATOM 14 N9 A B1083 34.929 94.922 116.476 1.00 38.60 N
ATOM 15 C8 A B1083 34.546 96.243 116.484 1.00 35.97 C
ATOM 16 N7 A B1083 34.466 96.776 115.293 1.00 36.00 N
ATOM 17 C5 A B1083 34.818 95.739 114.440 1.00 33.18 C
ATOM 18 C6 A B1083 34.908 95.659 113.043 1.00 30.61 C
ATOM 19 N6 A B1083 34.625 96.667 112.226 1.00 31.11 N
ATOM 20 N1 A B1083 35.299 94.489 112.507 1.00 33.29 N
ATOM 21 C2 A B1083 35.567 93.463 113.330 1.00 35.00 C
ATOM 22 N3 A B1083 35.504 93.412 114.659 1.00 35.07 N
ATOM 23 C4 A B1083 35.118 94.596 115.156 1.00 34.14 C
ATOM 24 P U B1084 39.669 94.915 119.164 1.00 44.08 P
ATOM 25 OP1 U B1084 40.710 94.313 120.040 1.00 41.97 O
ATOM 26 OP2 U B1084 39.328 96.349 119.301 1.00 40.26 O
ATOM 27 O5' U B1084 40.050 94.628 117.642 1.00 44.17 O
TER

Atoms:
C2: (34.959,97.275,108.498)
OP1: (40.496,94.653,104.424)
OP2: (38.893,92.674,104.082)
C4: (35.239,98.682,106.658)
O5': (38.433,94.383,105.812)
C3': (36.503,93.559,107.783)
C1': (36.644,95.540,109.051)
O4': (37.958,95.182,108.653)
C5': (38.931,93.702,106.989)
P: (39.102,94.105,104.394)
O2: (34.315,96.880,109.484)
C4': (37.956,93.828,108.128)
C2': (35.787,94.277,108.919)
O2': (35.857,93.558,110.137)
N1: (36.174,96.646,108.186)
N3: (34.520,98.290,107.717)
N4: (34.766,99.695,105.917)
C6: (36.899,97.054,107.096)
C5: (36.472,98.058,106.313)
O3': (36.246,92.164,107.731)
OP1: (35.098,98.830,118.835)
OP2: (33.549,98.857,120.887)
C3': (37.159,94.498,118.645)
C1': (35.090,94.038,117.632)
C5': (36.266,96.295,120.091)
O4': (34.841,94.808,118.802)
C8: (34.546,96.243,116.484)
O2': (36.438,92.165,118.336)
C6: (34.908,95.659,113.043)
C5: (34.818,95.739,114.440)
C4: (35.118,94.596,115.156)
P: (34.841,98.475,120.257)
C4': (36.053,94.895,119.594)
C2': (36.499,93.453,117.762)
C2: (35.567,93.463,113.330)
N1: (35.299,94.489,112.507)
N3: (35.504,93.412,114.659)
N6: (34.625,96.667,112.226)
N7: (34.466,96.776,115.293)
N9: (34.929,94.922,116.476)
O5': (35.025,96.904,120.430)
O3': (38.310,94.090,119.353)
Image (generated by PyMOL):
PyMOL image
show in jmol