Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:026:0662
Extra
PDB:
ATOM 1 O3' U A 25 46.718 120.204 43.516 1.00 29.81 O
ATOM 2 P C A 26 47.411 120.023 42.080 1.00 29.86 P
ATOM 3 OP1 C A 26 48.336 118.870 42.170 1.00 29.97 O
ATOM 4 OP2 C A 26 47.913 121.335 41.620 1.00 29.76 O
ATOM 5 O5' C A 26 46.213 119.638 41.112 1.00 30.87 O
ATOM 6 C5' C A 26 45.515 118.401 41.246 1.00 27.48 C
ATOM 7 C4' C A 26 44.376 118.359 40.265 1.00 30.71 C
ATOM 8 O4' C A 26 43.477 119.464 40.537 1.00 29.85 O
ATOM 9 C3' C A 26 44.738 118.576 38.805 1.00 31.55 C
ATOM 10 O3' C A 26 45.242 117.417 38.172 1.00 34.17 O
ATOM 11 C2' C A 26 43.402 118.991 38.223 1.00 31.75 C
ATOM 12 O2' C A 26 42.506 117.905 38.136 1.00 32.25 O
ATOM 13 C1' C A 26 42.896 119.911 39.321 1.00 31.90 C
ATOM 14 N1 C A 26 43.298 121.303 39.080 1.00 34.91 N
ATOM 15 C2 C A 26 42.451 122.114 38.327 1.00 36.74 C
ATOM 16 O2 C A 26 41.431 121.616 37.831 1.00 37.68 O
ATOM 17 N3 C A 26 42.765 123.418 38.153 1.00 37.75 N
ATOM 18 C4 C A 26 43.881 123.913 38.687 1.00 36.58 C
ATOM 19 N4 C A 26 44.122 125.213 38.524 1.00 36.55 N
ATOM 20 C5 C A 26 44.791 123.098 39.421 1.00 36.79 C
ATOM 21 C6 C A 26 44.463 121.809 39.592 1.00 36.51 C
ATOM 22 P A A 27 46.194 117.576 36.890 1.00 38.08 P
ATOM 23 OP1 A A 27 46.604 116.212 36.487 1.00 38.32 O
ATOM 24 OP2 A A 27 47.229 118.597 37.184 1.00 38.15 O
ATOM 25 O5' A A 27 45.236 118.178 35.770 1.00 39.79 O
TER
ATOM 1 O3' U B 661 34.786 115.890 28.679 1.00 47.85 O
ATOM 2 P A B 662 35.020 116.380 30.200 1.00 47.28 P
ATOM 3 OP1 A B 662 33.762 116.889 30.819 1.00 45.95 O
ATOM 4 OP2 A B 662 36.229 117.241 30.180 1.00 49.14 O
ATOM 5 O5' A B 662 35.419 115.046 30.956 1.00 44.14 O
ATOM 6 C5' A B 662 36.376 114.150 30.388 1.00 42.02 C
ATOM 7 C4' A B 662 37.195 113.526 31.479 1.00 40.76 C
ATOM 8 O4' A B 662 38.042 114.553 32.052 1.00 43.09 O
ATOM 9 C3' A B 662 36.385 112.941 32.633 1.00 41.50 C
ATOM 10 O3' A B 662 37.034 111.784 33.128 1.00 40.11 O
ATOM 11 C2' A B 662 36.409 114.063 33.665 1.00 41.90 C
ATOM 12 O2' A B 662 36.312 113.602 34.994 1.00 43.04 O
ATOM 13 C1' A B 662 37.798 114.646 33.440 1.00 43.61 C
ATOM 14 N9 A B 662 37.946 116.041 33.859 1.00 42.74 N
ATOM 15 C8 A B 662 37.195 117.140 33.519 1.00 42.91 C
ATOM 16 N7 A B 662 37.606 118.254 34.073 1.00 42.65 N
ATOM 17 C5 A B 662 38.703 117.862 34.828 1.00 44.87 C
ATOM 18 C6 A B 662 39.593 118.577 35.651 1.00 45.93 C
ATOM 19 N6 A B 662 39.526 119.894 35.846 1.00 48.26 N
ATOM 20 N1 A B 662 40.573 117.883 36.267 1.00 45.08 N
ATOM 21 C2 A B 662 40.654 116.562 36.057 1.00 44.57 C
ATOM 22 N3 A B 662 39.887 115.781 35.302 1.00 44.03 N
ATOM 23 C4 A B 662 38.919 116.501 34.708 1.00 43.80 C
ATOM 24 P U B 663 36.450 110.335 32.756 1.00 42.69 P
ATOM 25 OP1 U B 663 37.265 109.309 33.464 1.00 42.38 O
ATOM 26 OP2 U B 663 36.314 110.270 31.276 1.00 42.10 O
ATOM 27 O5' U B 663 34.992 110.327 33.391 1.00 37.53 O
TER
ATOM 2 P C A 26 47.411 120.023 42.080 1.00 29.86 P
ATOM 3 OP1 C A 26 48.336 118.870 42.170 1.00 29.97 O
ATOM 4 OP2 C A 26 47.913 121.335 41.620 1.00 29.76 O
ATOM 5 O5' C A 26 46.213 119.638 41.112 1.00 30.87 O
ATOM 6 C5' C A 26 45.515 118.401 41.246 1.00 27.48 C
ATOM 7 C4' C A 26 44.376 118.359 40.265 1.00 30.71 C
ATOM 8 O4' C A 26 43.477 119.464 40.537 1.00 29.85 O
ATOM 9 C3' C A 26 44.738 118.576 38.805 1.00 31.55 C
ATOM 10 O3' C A 26 45.242 117.417 38.172 1.00 34.17 O
ATOM 11 C2' C A 26 43.402 118.991 38.223 1.00 31.75 C
ATOM 12 O2' C A 26 42.506 117.905 38.136 1.00 32.25 O
ATOM 13 C1' C A 26 42.896 119.911 39.321 1.00 31.90 C
ATOM 14 N1 C A 26 43.298 121.303 39.080 1.00 34.91 N
ATOM 15 C2 C A 26 42.451 122.114 38.327 1.00 36.74 C
ATOM 16 O2 C A 26 41.431 121.616 37.831 1.00 37.68 O
ATOM 17 N3 C A 26 42.765 123.418 38.153 1.00 37.75 N
ATOM 18 C4 C A 26 43.881 123.913 38.687 1.00 36.58 C
ATOM 19 N4 C A 26 44.122 125.213 38.524 1.00 36.55 N
ATOM 20 C5 C A 26 44.791 123.098 39.421 1.00 36.79 C
ATOM 21 C6 C A 26 44.463 121.809 39.592 1.00 36.51 C
ATOM 22 P A A 27 46.194 117.576 36.890 1.00 38.08 P
ATOM 23 OP1 A A 27 46.604 116.212 36.487 1.00 38.32 O
ATOM 24 OP2 A A 27 47.229 118.597 37.184 1.00 38.15 O
ATOM 25 O5' A A 27 45.236 118.178 35.770 1.00 39.79 O
TER
ATOM 1 O3' U B 661 34.786 115.890 28.679 1.00 47.85 O
ATOM 2 P A B 662 35.020 116.380 30.200 1.00 47.28 P
ATOM 3 OP1 A B 662 33.762 116.889 30.819 1.00 45.95 O
ATOM 4 OP2 A B 662 36.229 117.241 30.180 1.00 49.14 O
ATOM 5 O5' A B 662 35.419 115.046 30.956 1.00 44.14 O
ATOM 6 C5' A B 662 36.376 114.150 30.388 1.00 42.02 C
ATOM 7 C4' A B 662 37.195 113.526 31.479 1.00 40.76 C
ATOM 8 O4' A B 662 38.042 114.553 32.052 1.00 43.09 O
ATOM 9 C3' A B 662 36.385 112.941 32.633 1.00 41.50 C
ATOM 10 O3' A B 662 37.034 111.784 33.128 1.00 40.11 O
ATOM 11 C2' A B 662 36.409 114.063 33.665 1.00 41.90 C
ATOM 12 O2' A B 662 36.312 113.602 34.994 1.00 43.04 O
ATOM 13 C1' A B 662 37.798 114.646 33.440 1.00 43.61 C
ATOM 14 N9 A B 662 37.946 116.041 33.859 1.00 42.74 N
ATOM 15 C8 A B 662 37.195 117.140 33.519 1.00 42.91 C
ATOM 16 N7 A B 662 37.606 118.254 34.073 1.00 42.65 N
ATOM 17 C5 A B 662 38.703 117.862 34.828 1.00 44.87 C
ATOM 18 C6 A B 662 39.593 118.577 35.651 1.00 45.93 C
ATOM 19 N6 A B 662 39.526 119.894 35.846 1.00 48.26 N
ATOM 20 N1 A B 662 40.573 117.883 36.267 1.00 45.08 N
ATOM 21 C2 A B 662 40.654 116.562 36.057 1.00 44.57 C
ATOM 22 N3 A B 662 39.887 115.781 35.302 1.00 44.03 N
ATOM 23 C4 A B 662 38.919 116.501 34.708 1.00 43.80 C
ATOM 24 P U B 663 36.450 110.335 32.756 1.00 42.69 P
ATOM 25 OP1 U B 663 37.265 109.309 33.464 1.00 42.38 O
ATOM 26 OP2 U B 663 36.314 110.270 31.276 1.00 42.10 O
ATOM 27 O5' U B 663 34.992 110.327 33.391 1.00 37.53 O
TER
Atoms:
C2: (42.451,122.114,38.327)
OP1: (48.336,118.870,42.170)
OP2: (47.913,121.335,41.620)
C4: (43.881,123.913,38.687)
O5': (46.213,119.638,41.112)
C3': (44.738,118.576,38.805)
C1': (42.896,119.911,39.321)
O4': (43.477,119.464,40.537)
C5': (45.515,118.401,41.246)
P: (47.411,120.023,42.080)
O2: (41.431,121.616,37.831)
C4': (44.376,118.359,40.265)
C2': (43.402,118.991,38.223)
O2': (42.506,117.905,38.136)
N1: (43.298,121.303,39.080)
N3: (42.765,123.418,38.153)
N4: (44.122,125.213,38.524)
C6: (44.463,121.809,39.592)
C5: (44.791,123.098,39.421)
O3': (45.242,117.417,38.172)
OP1: (48.336,118.870,42.170)
OP2: (47.913,121.335,41.620)
C4: (43.881,123.913,38.687)
O5': (46.213,119.638,41.112)
C3': (44.738,118.576,38.805)
C1': (42.896,119.911,39.321)
O4': (43.477,119.464,40.537)
C5': (45.515,118.401,41.246)
P: (47.411,120.023,42.080)
O2: (41.431,121.616,37.831)
C4': (44.376,118.359,40.265)
C2': (43.402,118.991,38.223)
O2': (42.506,117.905,38.136)
N1: (43.298,121.303,39.080)
N3: (42.765,123.418,38.153)
N4: (44.122,125.213,38.524)
C6: (44.463,121.809,39.592)
C5: (44.791,123.098,39.421)
O3': (45.242,117.417,38.172)
OP1: (33.762,116.889,30.819)
OP2: (36.229,117.241,30.180)
C3': (36.385,112.941,32.633)
C1': (37.798,114.646,33.440)
C5': (36.376,114.150,30.388)
O4': (38.042,114.553,32.052)
C8: (37.195,117.140,33.519)
O2': (36.312,113.602,34.994)
C6: (39.593,118.577,35.651)
C5: (38.703,117.862,34.828)
C4: (38.919,116.501,34.708)
P: (35.020,116.380,30.200)
C4': (37.195,113.526,31.479)
C2': (36.409,114.063,33.665)
C2: (40.654,116.562,36.057)
N1: (40.573,117.883,36.267)
N3: (39.887,115.781,35.302)
N6: (39.526,119.894,35.846)
N7: (37.606,118.254,34.073)
N9: (37.946,116.041,33.859)
O5': (35.419,115.046,30.956)
O3': (37.034,111.784,33.128)
OP2: (36.229,117.241,30.180)
C3': (36.385,112.941,32.633)
C1': (37.798,114.646,33.440)
C5': (36.376,114.150,30.388)
O4': (38.042,114.553,32.052)
C8: (37.195,117.140,33.519)
O2': (36.312,113.602,34.994)
C6: (39.593,118.577,35.651)
C5: (38.703,117.862,34.828)
C4: (38.919,116.501,34.708)
P: (35.020,116.380,30.200)
C4': (37.195,113.526,31.479)
C2': (36.409,114.063,33.665)
C2: (40.654,116.562,36.057)
N1: (40.573,117.883,36.267)
N3: (39.887,115.781,35.302)
N6: (39.526,119.894,35.846)
N7: (37.606,118.254,34.073)
N9: (37.946,116.041,33.859)
O5': (35.419,115.046,30.956)
O3': (37.034,111.784,33.128)
Image (generated by PyMOL):