ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2OTL:026:0662

Extra

PDB:
ATOM 1 O3' U A 25 46.849 120.593 43.735 1.00 33.76 O
ATOM 2 P C A 26 47.508 120.431 42.281 1.00 34.46 P
ATOM 3 OP1 C A 26 48.475 119.308 42.336 1.00 33.41 O
ATOM 4 OP2 C A 26 47.954 121.758 41.814 1.00 34.69 O
ATOM 5 O5' C A 26 46.291 120.010 41.350 1.00 36.94 O
ATOM 6 C5' C A 26 45.692 118.711 41.439 1.00 34.70 C
ATOM 7 C4' C A 26 44.519 118.631 40.501 1.00 38.03 C
ATOM 8 O4' C A 26 43.605 119.719 40.804 1.00 38.44 O
ATOM 9 C3' C A 26 44.825 118.850 39.029 1.00 39.16 C
ATOM 10 O3' C A 26 45.308 117.679 38.401 1.00 42.19 O
ATOM 11 C2' C A 26 43.466 119.259 38.487 1.00 39.30 C
ATOM 12 O2' C A 26 42.565 118.177 38.407 1.00 40.17 O
ATOM 13 C1' C A 26 42.974 120.156 39.611 1.00 39.15 C
ATOM 14 N1 C A 26 43.336 121.552 39.376 1.00 41.29 N
ATOM 15 C2 C A 26 42.446 122.353 38.663 1.00 42.10 C
ATOM 16 O2 C A 26 41.415 121.842 38.211 1.00 41.46 O
ATOM 17 N3 C A 26 42.731 123.661 38.483 1.00 42.70 N
ATOM 18 C4 C A 26 43.855 124.172 38.982 1.00 41.06 C
ATOM 19 N4 C A 26 44.062 125.475 38.821 1.00 40.46 N
ATOM 20 C5 C A 26 44.804 123.370 39.679 1.00 42.08 C
ATOM 21 C6 C A 26 44.508 122.074 39.852 1.00 42.18 C
ATOM 22 P A A 27 46.363 117.812 37.199 1.00 46.28 P
ATOM 23 OP1 A A 27 46.857 116.451 36.873 1.00 44.91 O
ATOM 24 OP2 A A 27 47.335 118.882 37.551 1.00 46.97 O
ATOM 25 O5' A A 27 45.483 118.351 35.987 1.00 47.35 O
TER

ATOM 1 O3' U B 661 34.774 116.289 28.899 1.00 52.08 O
ATOM 2 P A B 662 34.973 116.778 30.424 1.00 50.66 P
ATOM 3 OP1 A B 662 33.688 117.267 30.993 1.00 50.62 O
ATOM 4 OP2 A B 662 36.159 117.672 30.436 1.00 51.28 O
ATOM 5 O5' A B 662 35.378 115.439 31.180 1.00 47.16 O
ATOM 6 C5' A B 662 36.317 114.531 30.589 1.00 45.72 C
ATOM 7 C4' A B 662 37.157 113.881 31.659 1.00 44.84 C
ATOM 8 O4' A B 662 38.046 114.873 32.239 1.00 45.94 O
ATOM 9 C3' A B 662 36.374 113.281 32.827 1.00 45.36 C
ATOM 10 O3' A B 662 37.071 112.143 33.316 1.00 44.33 O
ATOM 11 C2' A B 662 36.431 114.396 33.863 1.00 44.41 C
ATOM 12 O2' A B 662 36.309 113.947 35.195 1.00 44.92 O
ATOM 13 C1' A B 662 37.841 114.924 33.636 1.00 45.20 C
ATOM 14 N9 A B 662 38.017 116.294 34.110 1.00 44.03 N
ATOM 15 C8 A B 662 37.245 117.403 33.873 1.00 44.01 C
ATOM 16 N7 A B 662 37.645 118.474 34.510 1.00 43.05 N
ATOM 17 C5 A B 662 38.769 118.046 35.199 1.00 44.62 C
ATOM 18 C6 A B 662 39.658 118.704 36.066 1.00 43.77 C
ATOM 19 N6 A B 662 39.553 119.988 36.400 1.00 43.14 N
ATOM 20 N1 A B 662 40.674 117.984 36.586 1.00 44.77 N
ATOM 21 C2 A B 662 40.784 116.689 36.253 1.00 45.15 C
ATOM 22 N3 A B 662 40.016 115.958 35.449 1.00 45.50 N
ATOM 23 C4 A B 662 39.015 116.707 34.950 1.00 45.30 C
ATOM 24 P U B 663 36.557 110.676 32.930 1.00 44.94 P
ATOM 25 OP1 U B 663 37.463 109.704 33.598 1.00 43.32 O
ATOM 26 OP2 U B 663 36.387 110.626 31.454 1.00 45.32 O
ATOM 27 O5' U B 663 35.112 110.595 33.588 1.00 41.31 O
TER

Atoms:
C2: (42.446,122.353,38.663)
OP1: (48.475,119.308,42.336)
OP2: (47.954,121.758,41.814)
C4: (43.855,124.172,38.982)
O5': (46.291,120.010,41.350)
C3': (44.825,118.850,39.029)
C1': (42.974,120.156,39.611)
O4': (43.605,119.719,40.804)
C5': (45.692,118.711,41.439)
P: (47.508,120.431,42.281)
O2: (41.415,121.842,38.211)
C4': (44.519,118.631,40.501)
C2': (43.466,119.259,38.487)
O2': (42.565,118.177,38.407)
N1: (43.336,121.552,39.376)
N3: (42.731,123.661,38.483)
N4: (44.062,125.475,38.821)
C6: (44.508,122.074,39.852)
C5: (44.804,123.370,39.679)
O3': (45.308,117.679,38.401)
OP1: (33.688,117.267,30.993)
OP2: (36.159,117.672,30.436)
C3': (36.374,113.281,32.827)
C1': (37.841,114.924,33.636)
C5': (36.317,114.531,30.589)
O4': (38.046,114.873,32.239)
C8: (37.245,117.403,33.873)
O2': (36.309,113.947,35.195)
C6: (39.658,118.704,36.066)
C5: (38.769,118.046,35.199)
C4: (39.015,116.707,34.950)
P: (34.973,116.778,30.424)
C4': (37.157,113.881,31.659)
C2': (36.431,114.396,33.863)
C2: (40.784,116.689,36.253)
N1: (40.674,117.984,36.586)
N3: (40.016,115.958,35.449)
N6: (39.553,119.988,36.400)
N7: (37.645,118.474,34.510)
N9: (38.017,116.294,34.110)
O5': (35.378,115.439,31.180)
O3': (37.071,112.143,33.316)
Image (generated by PyMOL):
PyMOL image
show in jmol