Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0984:0930
Extra
PDB:
ATOM 1 O3' G A 983 19.783 70.396 92.429 1.00 40.32 O
ATOM 2 P C A 984 18.914 70.895 91.170 1.00 41.27 P
ATOM 3 OP1 C A 984 17.769 71.677 91.706 1.00 38.32 O
ATOM 4 OP2 C A 984 18.661 69.747 90.263 1.00 39.54 O
ATOM 5 O5' C A 984 19.884 71.890 90.397 1.00 42.96 O
ATOM 6 C5' C A 984 20.264 73.153 90.968 1.00 41.13 C
ATOM 7 C4' C A 984 21.480 73.689 90.260 1.00 41.88 C
ATOM 8 O4' C A 984 22.568 72.744 90.426 1.00 42.38 O
ATOM 9 C3' C A 984 21.369 73.830 88.749 1.00 41.28 C
ATOM 10 O3' C A 984 20.708 75.025 88.363 1.00 42.02 O
ATOM 11 C2' C A 984 22.828 73.830 88.341 1.00 42.00 C
ATOM 12 O2' C A 984 23.450 75.059 88.658 1.00 43.91 O
ATOM 13 C1' C A 984 23.376 72.740 89.261 1.00 42.26 C
ATOM 14 N1 C A 984 23.284 71.414 88.627 1.00 42.87 N
ATOM 15 C2 C A 984 24.261 71.055 87.700 1.00 43.78 C
ATOM 16 O2 C A 984 25.171 71.847 87.468 1.00 46.49 O
ATOM 17 N3 C A 984 24.183 69.859 87.073 1.00 43.83 N
ATOM 18 C4 C A 984 23.171 69.034 87.341 1.00 42.42 C
ATOM 19 N4 C A 984 23.121 67.877 86.678 1.00 41.52 N
ATOM 20 C5 C A 984 22.163 69.364 88.297 1.00 43.84 C
ATOM 21 C6 C A 984 22.259 70.553 88.915 1.00 42.93 C
ATOM 22 P U A 985 19.878 75.069 86.989 1.00 38.23 P
ATOM 23 OP1 U A 985 19.294 76.425 86.887 1.00 38.72 O
ATOM 24 OP2 U A 985 18.993 73.883 86.925 1.00 41.50 O
ATOM 25 O5' U A 985 20.985 74.901 85.863 1.00 38.94 O
TER
ATOM 1 O3' U B 929 33.732 71.273 87.536 1.00 45.90 O
ATOM 2 P A B 930 35.047 72.075 87.979 1.00 45.52 P
ATOM 3 OP1 A B 930 35.520 72.866 86.811 1.00 45.10 O
ATOM 4 OP2 A B 930 35.963 71.106 88.631 1.00 45.07 O
ATOM 5 O5' A B 930 34.484 73.072 89.083 1.00 43.07 O
ATOM 6 C5' A B 930 35.283 74.137 89.598 1.00 41.42 C
ATOM 7 C4' A B 930 34.431 75.060 90.429 1.00 40.86 C
ATOM 8 O4' A B 930 33.374 75.611 89.599 1.00 41.77 O
ATOM 9 C3' A B 930 33.680 74.392 91.563 1.00 39.03 C
ATOM 10 O3' A B 930 34.480 74.169 92.702 1.00 37.66 O
ATOM 11 C2' A B 930 32.539 75.364 91.805 1.00 41.71 C
ATOM 12 O2' A B 930 32.886 76.494 92.576 1.00 40.18 O
ATOM 13 C1' A B 930 32.191 75.759 90.367 1.00 42.34 C
ATOM 14 N9 A B 930 31.185 74.846 89.825 1.00 45.25 N
ATOM 15 C8 A B 930 31.273 73.475 89.681 1.00 46.21 C
ATOM 16 N7 A B 930 30.181 72.921 89.214 1.00 46.71 N
ATOM 17 C5 A B 930 29.326 73.996 89.021 1.00 48.78 C
ATOM 18 C6 A B 930 28.017 74.071 88.547 1.00 50.06 C
ATOM 19 N6 A B 930 27.327 73.009 88.157 1.00 53.25 N
ATOM 20 N1 A B 930 27.436 75.289 88.484 1.00 51.59 N
ATOM 21 C2 A B 930 28.148 76.358 88.877 1.00 52.16 C
ATOM 22 N3 A B 930 29.397 76.415 89.339 1.00 49.19 N
ATOM 23 C4 A B 930 29.934 75.187 89.387 1.00 46.99 C
ATOM 24 P G B 931 34.405 72.751 93.445 1.00 39.24 P
ATOM 25 OP1 G B 931 35.445 72.705 94.507 1.00 39.44 O
ATOM 26 OP2 G B 931 34.390 71.699 92.394 1.00 37.87 O
ATOM 27 O5' G B 931 32.973 72.778 94.140 1.00 38.87 O
TER
ATOM 2 P C A 984 18.914 70.895 91.170 1.00 41.27 P
ATOM 3 OP1 C A 984 17.769 71.677 91.706 1.00 38.32 O
ATOM 4 OP2 C A 984 18.661 69.747 90.263 1.00 39.54 O
ATOM 5 O5' C A 984 19.884 71.890 90.397 1.00 42.96 O
ATOM 6 C5' C A 984 20.264 73.153 90.968 1.00 41.13 C
ATOM 7 C4' C A 984 21.480 73.689 90.260 1.00 41.88 C
ATOM 8 O4' C A 984 22.568 72.744 90.426 1.00 42.38 O
ATOM 9 C3' C A 984 21.369 73.830 88.749 1.00 41.28 C
ATOM 10 O3' C A 984 20.708 75.025 88.363 1.00 42.02 O
ATOM 11 C2' C A 984 22.828 73.830 88.341 1.00 42.00 C
ATOM 12 O2' C A 984 23.450 75.059 88.658 1.00 43.91 O
ATOM 13 C1' C A 984 23.376 72.740 89.261 1.00 42.26 C
ATOM 14 N1 C A 984 23.284 71.414 88.627 1.00 42.87 N
ATOM 15 C2 C A 984 24.261 71.055 87.700 1.00 43.78 C
ATOM 16 O2 C A 984 25.171 71.847 87.468 1.00 46.49 O
ATOM 17 N3 C A 984 24.183 69.859 87.073 1.00 43.83 N
ATOM 18 C4 C A 984 23.171 69.034 87.341 1.00 42.42 C
ATOM 19 N4 C A 984 23.121 67.877 86.678 1.00 41.52 N
ATOM 20 C5 C A 984 22.163 69.364 88.297 1.00 43.84 C
ATOM 21 C6 C A 984 22.259 70.553 88.915 1.00 42.93 C
ATOM 22 P U A 985 19.878 75.069 86.989 1.00 38.23 P
ATOM 23 OP1 U A 985 19.294 76.425 86.887 1.00 38.72 O
ATOM 24 OP2 U A 985 18.993 73.883 86.925 1.00 41.50 O
ATOM 25 O5' U A 985 20.985 74.901 85.863 1.00 38.94 O
TER
ATOM 1 O3' U B 929 33.732 71.273 87.536 1.00 45.90 O
ATOM 2 P A B 930 35.047 72.075 87.979 1.00 45.52 P
ATOM 3 OP1 A B 930 35.520 72.866 86.811 1.00 45.10 O
ATOM 4 OP2 A B 930 35.963 71.106 88.631 1.00 45.07 O
ATOM 5 O5' A B 930 34.484 73.072 89.083 1.00 43.07 O
ATOM 6 C5' A B 930 35.283 74.137 89.598 1.00 41.42 C
ATOM 7 C4' A B 930 34.431 75.060 90.429 1.00 40.86 C
ATOM 8 O4' A B 930 33.374 75.611 89.599 1.00 41.77 O
ATOM 9 C3' A B 930 33.680 74.392 91.563 1.00 39.03 C
ATOM 10 O3' A B 930 34.480 74.169 92.702 1.00 37.66 O
ATOM 11 C2' A B 930 32.539 75.364 91.805 1.00 41.71 C
ATOM 12 O2' A B 930 32.886 76.494 92.576 1.00 40.18 O
ATOM 13 C1' A B 930 32.191 75.759 90.367 1.00 42.34 C
ATOM 14 N9 A B 930 31.185 74.846 89.825 1.00 45.25 N
ATOM 15 C8 A B 930 31.273 73.475 89.681 1.00 46.21 C
ATOM 16 N7 A B 930 30.181 72.921 89.214 1.00 46.71 N
ATOM 17 C5 A B 930 29.326 73.996 89.021 1.00 48.78 C
ATOM 18 C6 A B 930 28.017 74.071 88.547 1.00 50.06 C
ATOM 19 N6 A B 930 27.327 73.009 88.157 1.00 53.25 N
ATOM 20 N1 A B 930 27.436 75.289 88.484 1.00 51.59 N
ATOM 21 C2 A B 930 28.148 76.358 88.877 1.00 52.16 C
ATOM 22 N3 A B 930 29.397 76.415 89.339 1.00 49.19 N
ATOM 23 C4 A B 930 29.934 75.187 89.387 1.00 46.99 C
ATOM 24 P G B 931 34.405 72.751 93.445 1.00 39.24 P
ATOM 25 OP1 G B 931 35.445 72.705 94.507 1.00 39.44 O
ATOM 26 OP2 G B 931 34.390 71.699 92.394 1.00 37.87 O
ATOM 27 O5' G B 931 32.973 72.778 94.140 1.00 38.87 O
TER
Atoms:
C2: (24.261,71.055,87.700)
OP1: (17.769,71.677,91.706)
OP2: (18.661,69.747,90.263)
C4: (23.171,69.034,87.341)
O5': (19.884,71.890,90.397)
C3': (21.369,73.830,88.749)
C1': (23.376,72.740,89.261)
O4': (22.568,72.744,90.426)
C5': (20.264,73.153,90.968)
P: (18.914,70.895,91.170)
O2: (25.171,71.847,87.468)
C4': (21.480,73.689,90.260)
C2': (22.828,73.830,88.341)
O2': (23.450,75.059,88.658)
N1: (23.284,71.414,88.627)
N3: (24.183,69.859,87.073)
N4: (23.121,67.877,86.678)
C6: (22.259,70.553,88.915)
C5: (22.163,69.364,88.297)
O3': (20.708,75.025,88.363)
OP1: (17.769,71.677,91.706)
OP2: (18.661,69.747,90.263)
C4: (23.171,69.034,87.341)
O5': (19.884,71.890,90.397)
C3': (21.369,73.830,88.749)
C1': (23.376,72.740,89.261)
O4': (22.568,72.744,90.426)
C5': (20.264,73.153,90.968)
P: (18.914,70.895,91.170)
O2: (25.171,71.847,87.468)
C4': (21.480,73.689,90.260)
C2': (22.828,73.830,88.341)
O2': (23.450,75.059,88.658)
N1: (23.284,71.414,88.627)
N3: (24.183,69.859,87.073)
N4: (23.121,67.877,86.678)
C6: (22.259,70.553,88.915)
C5: (22.163,69.364,88.297)
O3': (20.708,75.025,88.363)
OP1: (35.520,72.866,86.811)
OP2: (35.963,71.106,88.631)
C3': (33.680,74.392,91.563)
C1': (32.191,75.759,90.367)
C5': (35.283,74.137,89.598)
O4': (33.374,75.611,89.599)
C8: (31.273,73.475,89.681)
O2': (32.886,76.494,92.576)
C6: (28.017,74.071,88.547)
C5: (29.326,73.996,89.021)
C4: (29.934,75.187,89.387)
P: (35.047,72.075,87.979)
C4': (34.431,75.060,90.429)
C2': (32.539,75.364,91.805)
C2: (28.148,76.358,88.877)
N1: (27.436,75.289,88.484)
N3: (29.397,76.415,89.339)
N6: (27.327,73.009,88.157)
N7: (30.181,72.921,89.214)
N9: (31.185,74.846,89.825)
O5': (34.484,73.072,89.083)
O3': (34.480,74.169,92.702)
OP2: (35.963,71.106,88.631)
C3': (33.680,74.392,91.563)
C1': (32.191,75.759,90.367)
C5': (35.283,74.137,89.598)
O4': (33.374,75.611,89.599)
C8: (31.273,73.475,89.681)
O2': (32.886,76.494,92.576)
C6: (28.017,74.071,88.547)
C5: (29.326,73.996,89.021)
C4: (29.934,75.187,89.387)
P: (35.047,72.075,87.979)
C4': (34.431,75.060,90.429)
C2': (32.539,75.364,91.805)
C2: (28.148,76.358,88.877)
N1: (27.436,75.289,88.484)
N3: (29.397,76.415,89.339)
N6: (27.327,73.009,88.157)
N7: (30.181,72.921,89.214)
N9: (31.185,74.846,89.825)
O5': (34.484,73.072,89.083)
O3': (34.480,74.169,92.702)
Image (generated by PyMOL):