Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02339:01190
Extra
PDB:
ATOM 1 O3' A A2338 69.988 109.736 129.263 1.00 44.10 O
ATOM 2 P C A2339 70.288 108.929 130.619 1.00 45.81 P
ATOM 3 OP1 C A2339 70.992 109.879 131.514 1.00 45.78 O
ATOM 4 OP2 C A2339 70.915 107.620 130.298 1.00 44.22 O
ATOM 5 O5' C A2339 68.841 108.652 131.223 1.00 43.81 O
ATOM 6 C5' C A2339 68.028 109.742 131.669 1.00 43.76 C
ATOM 7 C4' C A2339 66.602 109.297 131.876 1.00 44.60 C
ATOM 8 O4' C A2339 66.039 108.835 130.619 1.00 45.07 O
ATOM 9 C3' C A2339 66.356 108.121 132.805 1.00 43.87 C
ATOM 10 O3' C A2339 66.432 108.467 134.179 1.00 44.94 O
ATOM 11 C2' C A2339 64.947 107.719 132.398 1.00 42.07 C
ATOM 12 O2' C A2339 63.970 108.617 132.880 1.00 40.25 O
ATOM 13 C1' C A2339 65.044 107.856 130.882 1.00 41.44 C
ATOM 14 N1 C A2339 65.475 106.585 130.297 1.00 40.06 N
ATOM 15 C2 C A2339 64.511 105.619 130.036 1.00 40.46 C
ATOM 16 O2 C A2339 63.320 105.891 130.250 1.00 39.70 O
ATOM 17 N3 C A2339 64.894 104.417 129.552 1.00 40.24 N
ATOM 18 C4 C A2339 66.183 104.178 129.312 1.00 38.52 C
ATOM 19 N4 C A2339 66.517 102.981 128.848 1.00 39.36 N
ATOM 20 C5 C A2339 67.186 105.159 129.540 1.00 38.26 C
ATOM 21 C6 C A2339 66.793 106.336 130.030 1.00 38.58 C
ATOM 22 P U A2340 66.684 107.315 135.269 1.00 45.23 P
ATOM 23 OP1 U A2340 66.836 107.996 136.574 1.00 47.60 O
ATOM 24 OP2 U A2340 67.753 106.411 134.779 1.00 44.32 O
ATOM 25 O5' U A2340 65.320 106.493 135.294 1.00 44.96 O
TER
ATOM 1 O3' A B1189 51.954 108.005 135.260 1.00 37.93 O
ATOM 2 P A B1190 52.438 109.521 135.478 1.00 38.77 P
ATOM 3 OP1 A B1190 52.844 109.721 136.884 1.00 39.52 O
ATOM 4 OP2 A B1190 51.389 110.384 134.900 1.00 40.87 O
ATOM 5 O5' A B1190 53.752 109.637 134.581 1.00 38.68 O
ATOM 6 C5' A B1190 53.676 109.943 133.170 1.00 36.70 C
ATOM 7 C4' A B1190 54.689 111.008 132.819 1.00 37.06 C
ATOM 8 O4' A B1190 56.027 110.466 132.946 1.00 38.08 O
ATOM 9 C3' A B1190 54.682 111.507 131.387 1.00 36.95 C
ATOM 10 O3' A B1190 53.630 112.449 131.199 1.00 36.22 O
ATOM 11 C2' A B1190 56.065 112.151 131.269 1.00 36.33 C
ATOM 12 O2' A B1190 56.146 113.432 131.851 1.00 34.69 O
ATOM 13 C1' A B1190 56.911 111.211 132.128 1.00 37.12 C
ATOM 14 N9 A B1190 57.746 110.276 131.384 1.00 39.19 N
ATOM 15 C8 A B1190 57.434 109.567 130.252 1.00 40.74 C
ATOM 16 N7 A B1190 58.401 108.790 129.833 1.00 41.68 N
ATOM 17 C5 A B1190 59.421 109.003 130.747 1.00 41.76 C
ATOM 18 C6 A B1190 60.713 108.472 130.861 1.00 41.38 C
ATOM 19 N6 A B1190 61.221 107.578 130.011 1.00 38.86 N
ATOM 20 N1 A B1190 61.477 108.894 131.893 1.00 41.22 N
ATOM 21 C2 A B1190 60.966 109.786 132.745 1.00 40.16 C
ATOM 22 N3 A B1190 59.767 110.359 132.744 1.00 41.42 N
ATOM 23 C4 A B1190 59.033 109.920 131.707 1.00 41.48 C
ATOM 24 P A B1191 52.910 112.570 129.771 1.00 37.28 P
ATOM 25 OP1 A B1191 51.647 113.326 129.977 1.00 37.56 O
ATOM 26 OP2 A B1191 52.867 111.223 129.156 1.00 37.62 O
ATOM 27 O5' A B1191 53.885 113.497 128.923 1.00 35.16 O
TER
ATOM 2 P C A2339 70.288 108.929 130.619 1.00 45.81 P
ATOM 3 OP1 C A2339 70.992 109.879 131.514 1.00 45.78 O
ATOM 4 OP2 C A2339 70.915 107.620 130.298 1.00 44.22 O
ATOM 5 O5' C A2339 68.841 108.652 131.223 1.00 43.81 O
ATOM 6 C5' C A2339 68.028 109.742 131.669 1.00 43.76 C
ATOM 7 C4' C A2339 66.602 109.297 131.876 1.00 44.60 C
ATOM 8 O4' C A2339 66.039 108.835 130.619 1.00 45.07 O
ATOM 9 C3' C A2339 66.356 108.121 132.805 1.00 43.87 C
ATOM 10 O3' C A2339 66.432 108.467 134.179 1.00 44.94 O
ATOM 11 C2' C A2339 64.947 107.719 132.398 1.00 42.07 C
ATOM 12 O2' C A2339 63.970 108.617 132.880 1.00 40.25 O
ATOM 13 C1' C A2339 65.044 107.856 130.882 1.00 41.44 C
ATOM 14 N1 C A2339 65.475 106.585 130.297 1.00 40.06 N
ATOM 15 C2 C A2339 64.511 105.619 130.036 1.00 40.46 C
ATOM 16 O2 C A2339 63.320 105.891 130.250 1.00 39.70 O
ATOM 17 N3 C A2339 64.894 104.417 129.552 1.00 40.24 N
ATOM 18 C4 C A2339 66.183 104.178 129.312 1.00 38.52 C
ATOM 19 N4 C A2339 66.517 102.981 128.848 1.00 39.36 N
ATOM 20 C5 C A2339 67.186 105.159 129.540 1.00 38.26 C
ATOM 21 C6 C A2339 66.793 106.336 130.030 1.00 38.58 C
ATOM 22 P U A2340 66.684 107.315 135.269 1.00 45.23 P
ATOM 23 OP1 U A2340 66.836 107.996 136.574 1.00 47.60 O
ATOM 24 OP2 U A2340 67.753 106.411 134.779 1.00 44.32 O
ATOM 25 O5' U A2340 65.320 106.493 135.294 1.00 44.96 O
TER
ATOM 1 O3' A B1189 51.954 108.005 135.260 1.00 37.93 O
ATOM 2 P A B1190 52.438 109.521 135.478 1.00 38.77 P
ATOM 3 OP1 A B1190 52.844 109.721 136.884 1.00 39.52 O
ATOM 4 OP2 A B1190 51.389 110.384 134.900 1.00 40.87 O
ATOM 5 O5' A B1190 53.752 109.637 134.581 1.00 38.68 O
ATOM 6 C5' A B1190 53.676 109.943 133.170 1.00 36.70 C
ATOM 7 C4' A B1190 54.689 111.008 132.819 1.00 37.06 C
ATOM 8 O4' A B1190 56.027 110.466 132.946 1.00 38.08 O
ATOM 9 C3' A B1190 54.682 111.507 131.387 1.00 36.95 C
ATOM 10 O3' A B1190 53.630 112.449 131.199 1.00 36.22 O
ATOM 11 C2' A B1190 56.065 112.151 131.269 1.00 36.33 C
ATOM 12 O2' A B1190 56.146 113.432 131.851 1.00 34.69 O
ATOM 13 C1' A B1190 56.911 111.211 132.128 1.00 37.12 C
ATOM 14 N9 A B1190 57.746 110.276 131.384 1.00 39.19 N
ATOM 15 C8 A B1190 57.434 109.567 130.252 1.00 40.74 C
ATOM 16 N7 A B1190 58.401 108.790 129.833 1.00 41.68 N
ATOM 17 C5 A B1190 59.421 109.003 130.747 1.00 41.76 C
ATOM 18 C6 A B1190 60.713 108.472 130.861 1.00 41.38 C
ATOM 19 N6 A B1190 61.221 107.578 130.011 1.00 38.86 N
ATOM 20 N1 A B1190 61.477 108.894 131.893 1.00 41.22 N
ATOM 21 C2 A B1190 60.966 109.786 132.745 1.00 40.16 C
ATOM 22 N3 A B1190 59.767 110.359 132.744 1.00 41.42 N
ATOM 23 C4 A B1190 59.033 109.920 131.707 1.00 41.48 C
ATOM 24 P A B1191 52.910 112.570 129.771 1.00 37.28 P
ATOM 25 OP1 A B1191 51.647 113.326 129.977 1.00 37.56 O
ATOM 26 OP2 A B1191 52.867 111.223 129.156 1.00 37.62 O
ATOM 27 O5' A B1191 53.885 113.497 128.923 1.00 35.16 O
TER
Atoms:
C2: (64.511,105.619,130.036)
OP1: (70.992,109.879,131.514)
OP2: (70.915,107.620,130.298)
C4: (66.183,104.178,129.312)
O5': (68.841,108.652,131.223)
C3': (66.356,108.121,132.805)
C1': (65.044,107.856,130.882)
O4': (66.039,108.835,130.619)
C5': (68.028,109.742,131.669)
P: (70.288,108.929,130.619)
O2: (63.320,105.891,130.250)
C4': (66.602,109.297,131.876)
C2': (64.947,107.719,132.398)
O2': (63.970,108.617,132.880)
N1: (65.475,106.585,130.297)
N3: (64.894,104.417,129.552)
N4: (66.517,102.981,128.848)
C6: (66.793,106.336,130.030)
C5: (67.186,105.159,129.540)
O3': (66.432,108.467,134.179)
OP1: (70.992,109.879,131.514)
OP2: (70.915,107.620,130.298)
C4: (66.183,104.178,129.312)
O5': (68.841,108.652,131.223)
C3': (66.356,108.121,132.805)
C1': (65.044,107.856,130.882)
O4': (66.039,108.835,130.619)
C5': (68.028,109.742,131.669)
P: (70.288,108.929,130.619)
O2: (63.320,105.891,130.250)
C4': (66.602,109.297,131.876)
C2': (64.947,107.719,132.398)
O2': (63.970,108.617,132.880)
N1: (65.475,106.585,130.297)
N3: (64.894,104.417,129.552)
N4: (66.517,102.981,128.848)
C6: (66.793,106.336,130.030)
C5: (67.186,105.159,129.540)
O3': (66.432,108.467,134.179)
OP1: (52.844,109.721,136.884)
OP2: (51.389,110.384,134.900)
C3': (54.682,111.507,131.387)
C1': (56.911,111.211,132.128)
C5': (53.676,109.943,133.170)
O4': (56.027,110.466,132.946)
C8: (57.434,109.567,130.252)
O2': (56.146,113.432,131.851)
C6: (60.713,108.472,130.861)
C5: (59.421,109.003,130.747)
C4: (59.033,109.920,131.707)
P: (52.438,109.521,135.478)
C4': (54.689,111.008,132.819)
C2': (56.065,112.151,131.269)
C2: (60.966,109.786,132.745)
N1: (61.477,108.894,131.893)
N3: (59.767,110.359,132.744)
N6: (61.221,107.578,130.011)
N7: (58.401,108.790,129.833)
N9: (57.746,110.276,131.384)
O5': (53.752,109.637,134.581)
O3': (53.630,112.449,131.199)
OP2: (51.389,110.384,134.900)
C3': (54.682,111.507,131.387)
C1': (56.911,111.211,132.128)
C5': (53.676,109.943,133.170)
O4': (56.027,110.466,132.946)
C8: (57.434,109.567,130.252)
O2': (56.146,113.432,131.851)
C6: (60.713,108.472,130.861)
C5: (59.421,109.003,130.747)
C4: (59.033,109.920,131.707)
P: (52.438,109.521,135.478)
C4': (54.689,111.008,132.819)
C2': (56.065,112.151,131.269)
C2: (60.966,109.786,132.745)
N1: (61.477,108.894,131.893)
N3: (59.767,110.359,132.744)
N6: (61.221,107.578,130.011)
N7: (58.401,108.790,129.833)
N9: (57.746,110.276,131.384)
O5': (53.752,109.637,134.581)
O3': (53.630,112.449,131.199)
Image (generated by PyMOL):