Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A380:A364
Extra
PDB:
ATOM 1 O3' A A 379 -9.014 35.099 106.087 1.00 6.45 O
ATOM 2 P C A 380 -10.098 34.868 104.902 1.00 23.40 P
ATOM 3 OP1 C A 380 -9.723 35.821 103.827 1.00 4.18 O
ATOM 4 OP2 C A 380 -11.476 34.889 105.456 1.00 2.93 O
ATOM 5 O5' C A 380 -9.850 33.391 104.376 1.00 26.37 O
ATOM 6 C5' C A 380 -8.814 33.095 103.427 1.00 26.96 C
ATOM 7 C4' C A 380 -8.757 31.606 103.188 1.00 28.15 C
ATOM 8 O4' C A 380 -8.533 30.930 104.456 1.00 28.74 O
ATOM 9 C3' C A 380 -10.046 31.002 102.648 1.00 28.24 C
ATOM 10 O3' C A 380 -10.093 31.092 101.228 1.00 29.16 O
ATOM 11 C2' C A 380 -9.966 29.566 103.142 1.00 27.87 C
ATOM 12 O2' C A 380 -9.142 28.793 102.297 1.00 27.64 O
ATOM 13 C1' C A 380 -9.300 29.746 104.512 1.00 28.45 C
ATOM 14 N1 C A 380 -10.302 29.912 105.576 1.00 14.56 N
ATOM 15 C2 C A 380 -10.759 28.790 106.263 1.00 13.73 C
ATOM 16 O2 C A 380 -10.231 27.710 106.048 1.00 14.75 O
ATOM 17 N3 C A 380 -11.754 28.915 107.165 1.00 12.07 N
ATOM 18 C4 C A 380 -12.260 30.119 107.428 1.00 12.38 C
ATOM 19 N4 C A 380 -13.245 30.207 108.328 1.00 12.24 N
ATOM 20 C5 C A 380 -11.778 31.296 106.779 1.00 12.73 C
ATOM 21 C6 C A 380 -10.808 31.145 105.869 1.00 13.02 C
ATOM 22 P G A 381 -11.510 31.097 100.468 1.00 40.62 P
ATOM 23 OP1 G A 381 -11.198 31.311 99.035 1.00 20.85 O
ATOM 24 OP2 G A 381 -12.490 31.983 101.141 1.00 19.08 O
ATOM 25 O5' G A 381 -12.041 29.621 100.684 1.00 20.36 O
TER
ATOM 1 O3' A B 363 -8.144 16.880 103.385 1.00 0.87 O
ATOM 2 P A B 364 -6.918 17.866 103.087 1.00 51.15 P
ATOM 3 OP1 A B 364 -5.777 17.072 102.578 1.00 54.23 O
ATOM 4 OP2 A B 364 -6.745 18.698 104.300 1.00 54.40 O
ATOM 5 O5' A B 364 -7.449 18.800 101.912 1.00 10.38 O
ATOM 6 C5' A B 364 -7.658 18.284 100.586 1.00 9.39 C
ATOM 7 C4' A B 364 -7.842 19.422 99.596 1.00 8.68 C
ATOM 8 O4' A B 364 -9.083 20.128 99.858 1.00 9.19 O
ATOM 9 C3' A B 364 -6.738 20.466 99.641 1.00 7.92 C
ATOM 10 O3' A B 364 -5.725 20.098 98.720 1.00 8.55 O
ATOM 11 C2' A B 364 -7.435 21.736 99.186 1.00 8.36 C
ATOM 12 O2' A B 364 -7.395 21.888 97.787 1.00 6.70 O
ATOM 13 C1' A B 364 -8.874 21.516 99.687 1.00 10.12 C
ATOM 14 N9 A B 364 -9.141 22.169 100.972 1.00 51.82 N
ATOM 15 C8 A B 364 -9.420 21.573 102.176 1.00 51.81 C
ATOM 16 N7 A B 364 -9.605 22.420 103.154 1.00 52.76 N
ATOM 17 C5 A B 364 -9.434 23.659 102.556 1.00 52.92 C
ATOM 18 C6 A B 364 -9.488 24.962 103.060 1.00 53.32 C
ATOM 19 N6 A B 364 -9.724 25.245 104.334 1.00 53.98 N
ATOM 20 N1 A B 364 -9.277 25.980 102.203 1.00 51.21 N
ATOM 21 C2 A B 364 -9.020 25.695 100.928 1.00 51.73 C
ATOM 22 N3 A B 364 -8.931 24.513 100.334 1.00 52.90 N
ATOM 23 C4 A B 364 -9.154 23.521 101.214 1.00 52.92 C
ATOM 24 P U B 365 -4.227 20.628 98.923 1.00 28.70 P
ATOM 25 OP1 U B 365 -3.425 20.201 97.734 1.00 27.42 O
ATOM 26 OP2 U B 365 -3.796 20.197 100.288 1.00 28.91 O
ATOM 27 O5' U B 365 -4.421 22.213 98.871 1.00 2.12 O
TER
ATOM 2 P C A 380 -10.098 34.868 104.902 1.00 23.40 P
ATOM 3 OP1 C A 380 -9.723 35.821 103.827 1.00 4.18 O
ATOM 4 OP2 C A 380 -11.476 34.889 105.456 1.00 2.93 O
ATOM 5 O5' C A 380 -9.850 33.391 104.376 1.00 26.37 O
ATOM 6 C5' C A 380 -8.814 33.095 103.427 1.00 26.96 C
ATOM 7 C4' C A 380 -8.757 31.606 103.188 1.00 28.15 C
ATOM 8 O4' C A 380 -8.533 30.930 104.456 1.00 28.74 O
ATOM 9 C3' C A 380 -10.046 31.002 102.648 1.00 28.24 C
ATOM 10 O3' C A 380 -10.093 31.092 101.228 1.00 29.16 O
ATOM 11 C2' C A 380 -9.966 29.566 103.142 1.00 27.87 C
ATOM 12 O2' C A 380 -9.142 28.793 102.297 1.00 27.64 O
ATOM 13 C1' C A 380 -9.300 29.746 104.512 1.00 28.45 C
ATOM 14 N1 C A 380 -10.302 29.912 105.576 1.00 14.56 N
ATOM 15 C2 C A 380 -10.759 28.790 106.263 1.00 13.73 C
ATOM 16 O2 C A 380 -10.231 27.710 106.048 1.00 14.75 O
ATOM 17 N3 C A 380 -11.754 28.915 107.165 1.00 12.07 N
ATOM 18 C4 C A 380 -12.260 30.119 107.428 1.00 12.38 C
ATOM 19 N4 C A 380 -13.245 30.207 108.328 1.00 12.24 N
ATOM 20 C5 C A 380 -11.778 31.296 106.779 1.00 12.73 C
ATOM 21 C6 C A 380 -10.808 31.145 105.869 1.00 13.02 C
ATOM 22 P G A 381 -11.510 31.097 100.468 1.00 40.62 P
ATOM 23 OP1 G A 381 -11.198 31.311 99.035 1.00 20.85 O
ATOM 24 OP2 G A 381 -12.490 31.983 101.141 1.00 19.08 O
ATOM 25 O5' G A 381 -12.041 29.621 100.684 1.00 20.36 O
TER
ATOM 1 O3' A B 363 -8.144 16.880 103.385 1.00 0.87 O
ATOM 2 P A B 364 -6.918 17.866 103.087 1.00 51.15 P
ATOM 3 OP1 A B 364 -5.777 17.072 102.578 1.00 54.23 O
ATOM 4 OP2 A B 364 -6.745 18.698 104.300 1.00 54.40 O
ATOM 5 O5' A B 364 -7.449 18.800 101.912 1.00 10.38 O
ATOM 6 C5' A B 364 -7.658 18.284 100.586 1.00 9.39 C
ATOM 7 C4' A B 364 -7.842 19.422 99.596 1.00 8.68 C
ATOM 8 O4' A B 364 -9.083 20.128 99.858 1.00 9.19 O
ATOM 9 C3' A B 364 -6.738 20.466 99.641 1.00 7.92 C
ATOM 10 O3' A B 364 -5.725 20.098 98.720 1.00 8.55 O
ATOM 11 C2' A B 364 -7.435 21.736 99.186 1.00 8.36 C
ATOM 12 O2' A B 364 -7.395 21.888 97.787 1.00 6.70 O
ATOM 13 C1' A B 364 -8.874 21.516 99.687 1.00 10.12 C
ATOM 14 N9 A B 364 -9.141 22.169 100.972 1.00 51.82 N
ATOM 15 C8 A B 364 -9.420 21.573 102.176 1.00 51.81 C
ATOM 16 N7 A B 364 -9.605 22.420 103.154 1.00 52.76 N
ATOM 17 C5 A B 364 -9.434 23.659 102.556 1.00 52.92 C
ATOM 18 C6 A B 364 -9.488 24.962 103.060 1.00 53.32 C
ATOM 19 N6 A B 364 -9.724 25.245 104.334 1.00 53.98 N
ATOM 20 N1 A B 364 -9.277 25.980 102.203 1.00 51.21 N
ATOM 21 C2 A B 364 -9.020 25.695 100.928 1.00 51.73 C
ATOM 22 N3 A B 364 -8.931 24.513 100.334 1.00 52.90 N
ATOM 23 C4 A B 364 -9.154 23.521 101.214 1.00 52.92 C
ATOM 24 P U B 365 -4.227 20.628 98.923 1.00 28.70 P
ATOM 25 OP1 U B 365 -3.425 20.201 97.734 1.00 27.42 O
ATOM 26 OP2 U B 365 -3.796 20.197 100.288 1.00 28.91 O
ATOM 27 O5' U B 365 -4.421 22.213 98.871 1.00 2.12 O
TER
Atoms:
C2: (-10.759,28.790,106.263)
OP1: (-9.723,35.821,103.827)
OP2: (-11.476,34.889,105.456)
C4: (-12.260,30.119,107.428)
O5': (-9.850,33.391,104.376)
C3': (-10.046,31.002,102.648)
C1': (-9.300,29.746,104.512)
O4': (-8.533,30.930,104.456)
C5': (-8.814,33.095,103.427)
P: (-10.098,34.868,104.902)
O2: (-10.231,27.710,106.048)
C4': (-8.757,31.606,103.188)
C2': (-9.966,29.566,103.142)
O2': (-9.142,28.793,102.297)
N1: (-10.302,29.912,105.576)
N3: (-11.754,28.915,107.165)
N4: (-13.245,30.207,108.328)
C6: (-10.808,31.145,105.869)
C5: (-11.778,31.296,106.779)
O3': (-10.093,31.092,101.228)
OP1: (-9.723,35.821,103.827)
OP2: (-11.476,34.889,105.456)
C4: (-12.260,30.119,107.428)
O5': (-9.850,33.391,104.376)
C3': (-10.046,31.002,102.648)
C1': (-9.300,29.746,104.512)
O4': (-8.533,30.930,104.456)
C5': (-8.814,33.095,103.427)
P: (-10.098,34.868,104.902)
O2: (-10.231,27.710,106.048)
C4': (-8.757,31.606,103.188)
C2': (-9.966,29.566,103.142)
O2': (-9.142,28.793,102.297)
N1: (-10.302,29.912,105.576)
N3: (-11.754,28.915,107.165)
N4: (-13.245,30.207,108.328)
C6: (-10.808,31.145,105.869)
C5: (-11.778,31.296,106.779)
O3': (-10.093,31.092,101.228)
OP1: (-5.777,17.072,102.578)
OP2: (-6.745,18.698,104.300)
C3': (-6.738,20.466,99.641)
C1': (-8.874,21.516,99.687)
C5': (-7.658,18.284,100.586)
O4': (-9.083,20.128,99.858)
C8: (-9.420,21.573,102.176)
O2': (-7.395,21.888,97.787)
C6: (-9.488,24.962,103.060)
C5: (-9.434,23.659,102.556)
C4: (-9.154,23.521,101.214)
P: (-6.918,17.866,103.087)
C4': (-7.842,19.422,99.596)
C2': (-7.435,21.736,99.186)
C2: (-9.020,25.695,100.928)
N1: (-9.277,25.980,102.203)
N3: (-8.931,24.513,100.334)
N6: (-9.724,25.245,104.334)
N7: (-9.605,22.420,103.154)
N9: (-9.141,22.169,100.972)
O5': (-7.449,18.800,101.912)
O3': (-5.725,20.098,98.720)
OP2: (-6.745,18.698,104.300)
C3': (-6.738,20.466,99.641)
C1': (-8.874,21.516,99.687)
C5': (-7.658,18.284,100.586)
O4': (-9.083,20.128,99.858)
C8: (-9.420,21.573,102.176)
O2': (-7.395,21.888,97.787)
C6: (-9.488,24.962,103.060)
C5: (-9.434,23.659,102.556)
C4: (-9.154,23.521,101.214)
P: (-6.918,17.866,103.087)
C4': (-7.842,19.422,99.596)
C2': (-7.435,21.736,99.186)
C2: (-9.020,25.695,100.928)
N1: (-9.277,25.980,102.203)
N3: (-8.931,24.513,100.334)
N6: (-9.724,25.245,104.334)
N7: (-9.605,22.420,103.154)
N9: (-9.141,22.169,100.972)
O5': (-7.449,18.800,101.912)
O3': (-5.725,20.098,98.720)
Image (generated by PyMOL):