Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:026:0662
Extra
PDB:
ATOM 1 O3' U A 25 46.683 119.699 43.495 1.00 24.14 O
ATOM 2 P C A 26 47.381 119.545 42.055 1.00 26.15 P
ATOM 3 OP1 C A 26 48.280 118.368 42.154 1.00 27.19 O
ATOM 4 OP2 C A 26 47.926 120.850 41.612 1.00 26.06 O
ATOM 5 O5' C A 26 46.182 119.180 41.077 1.00 27.05 O
ATOM 6 C5' C A 26 45.470 117.944 41.220 1.00 25.14 C
ATOM 7 C4' C A 26 44.298 117.910 40.277 1.00 25.56 C
ATOM 8 O4' C A 26 43.412 119.026 40.574 1.00 24.56 O
ATOM 9 C3' C A 26 44.619 118.110 38.805 1.00 27.22 C
ATOM 10 O3' C A 26 45.108 116.948 38.164 1.00 30.54 O
ATOM 11 C2' C A 26 43.273 118.544 38.257 1.00 28.16 C
ATOM 12 O2' C A 26 42.368 117.465 38.136 1.00 27.58 O
ATOM 13 C1' C A 26 42.804 119.478 39.371 1.00 26.55 C
ATOM 14 N1 C A 26 43.218 120.872 39.113 1.00 27.12 N
ATOM 15 C2 C A 26 42.436 121.641 38.258 1.00 27.19 C
ATOM 16 O2 C A 26 41.465 121.110 37.697 1.00 27.79 O
ATOM 17 N3 C A 26 42.759 122.938 38.049 1.00 28.05 N
ATOM 18 C4 C A 26 43.833 123.464 38.644 1.00 29.15 C
ATOM 19 N4 C A 26 44.096 124.760 38.425 1.00 27.42 N
ATOM 20 C5 C A 26 44.679 122.690 39.493 1.00 24.54 C
ATOM 21 C6 C A 26 44.336 121.411 39.699 1.00 28.11 C
ATOM 22 P A A 27 46.130 117.097 36.930 1.00 34.48 P
ATOM 23 OP1 A A 27 46.603 115.729 36.624 1.00 34.83 O
ATOM 24 OP2 A A 27 47.117 118.168 37.209 1.00 33.35 O
ATOM 25 O5' A A 27 45.217 117.626 35.739 1.00 35.19 O
TER
ATOM 1 O3' U B 661 34.671 115.555 28.628 1.00 37.38 O
ATOM 2 P A B 662 34.881 116.005 30.160 1.00 38.52 P
ATOM 3 OP1 A B 662 33.590 116.415 30.788 1.00 35.83 O
ATOM 4 OP2 A B 662 36.047 116.937 30.194 1.00 40.56 O
ATOM 5 O5' A B 662 35.344 114.666 30.876 1.00 35.45 O
ATOM 6 C5' A B 662 36.311 113.794 30.270 1.00 32.10 C
ATOM 7 C4' A B 662 37.093 113.086 31.343 1.00 31.27 C
ATOM 8 O4' A B 662 37.996 114.039 31.962 1.00 33.83 O
ATOM 9 C3' A B 662 36.245 112.508 32.477 1.00 32.36 C
ATOM 10 O3' A B 662 36.885 111.357 33.004 1.00 33.34 O
ATOM 11 C2' A B 662 36.282 113.622 33.513 1.00 31.41 C
ATOM 12 O2' A B 662 36.092 113.162 34.832 1.00 32.36 O
ATOM 13 C1' A B 662 37.711 114.126 33.340 1.00 32.92 C
ATOM 14 N9 A B 662 37.911 115.503 33.785 1.00 33.17 N
ATOM 15 C8 A B 662 37.204 116.637 33.466 1.00 31.29 C
ATOM 16 N7 A B 662 37.619 117.710 34.091 1.00 30.45 N
ATOM 17 C5 A B 662 38.678 117.255 34.863 1.00 31.94 C
ATOM 18 C6 A B 662 39.538 117.902 35.765 1.00 30.87 C
ATOM 19 N6 A B 662 39.458 119.193 36.064 1.00 30.72 N
ATOM 20 N1 A B 662 40.494 117.161 36.360 1.00 31.40 N
ATOM 21 C2 A B 662 40.569 115.856 36.071 1.00 32.41 C
ATOM 22 N3 A B 662 39.814 115.131 35.250 1.00 32.46 N
ATOM 23 C4 A B 662 38.876 115.901 34.672 1.00 32.43 C
ATOM 24 P U B 663 36.366 109.903 32.582 1.00 35.45 P
ATOM 25 OP1 U B 663 37.286 108.927 33.212 1.00 34.78 O
ATOM 26 OP2 U B 663 36.169 109.886 31.105 1.00 34.46 O
ATOM 27 O5' U B 663 34.932 109.797 33.267 1.00 33.97 O
TER
ATOM 2 P C A 26 47.381 119.545 42.055 1.00 26.15 P
ATOM 3 OP1 C A 26 48.280 118.368 42.154 1.00 27.19 O
ATOM 4 OP2 C A 26 47.926 120.850 41.612 1.00 26.06 O
ATOM 5 O5' C A 26 46.182 119.180 41.077 1.00 27.05 O
ATOM 6 C5' C A 26 45.470 117.944 41.220 1.00 25.14 C
ATOM 7 C4' C A 26 44.298 117.910 40.277 1.00 25.56 C
ATOM 8 O4' C A 26 43.412 119.026 40.574 1.00 24.56 O
ATOM 9 C3' C A 26 44.619 118.110 38.805 1.00 27.22 C
ATOM 10 O3' C A 26 45.108 116.948 38.164 1.00 30.54 O
ATOM 11 C2' C A 26 43.273 118.544 38.257 1.00 28.16 C
ATOM 12 O2' C A 26 42.368 117.465 38.136 1.00 27.58 O
ATOM 13 C1' C A 26 42.804 119.478 39.371 1.00 26.55 C
ATOM 14 N1 C A 26 43.218 120.872 39.113 1.00 27.12 N
ATOM 15 C2 C A 26 42.436 121.641 38.258 1.00 27.19 C
ATOM 16 O2 C A 26 41.465 121.110 37.697 1.00 27.79 O
ATOM 17 N3 C A 26 42.759 122.938 38.049 1.00 28.05 N
ATOM 18 C4 C A 26 43.833 123.464 38.644 1.00 29.15 C
ATOM 19 N4 C A 26 44.096 124.760 38.425 1.00 27.42 N
ATOM 20 C5 C A 26 44.679 122.690 39.493 1.00 24.54 C
ATOM 21 C6 C A 26 44.336 121.411 39.699 1.00 28.11 C
ATOM 22 P A A 27 46.130 117.097 36.930 1.00 34.48 P
ATOM 23 OP1 A A 27 46.603 115.729 36.624 1.00 34.83 O
ATOM 24 OP2 A A 27 47.117 118.168 37.209 1.00 33.35 O
ATOM 25 O5' A A 27 45.217 117.626 35.739 1.00 35.19 O
TER
ATOM 1 O3' U B 661 34.671 115.555 28.628 1.00 37.38 O
ATOM 2 P A B 662 34.881 116.005 30.160 1.00 38.52 P
ATOM 3 OP1 A B 662 33.590 116.415 30.788 1.00 35.83 O
ATOM 4 OP2 A B 662 36.047 116.937 30.194 1.00 40.56 O
ATOM 5 O5' A B 662 35.344 114.666 30.876 1.00 35.45 O
ATOM 6 C5' A B 662 36.311 113.794 30.270 1.00 32.10 C
ATOM 7 C4' A B 662 37.093 113.086 31.343 1.00 31.27 C
ATOM 8 O4' A B 662 37.996 114.039 31.962 1.00 33.83 O
ATOM 9 C3' A B 662 36.245 112.508 32.477 1.00 32.36 C
ATOM 10 O3' A B 662 36.885 111.357 33.004 1.00 33.34 O
ATOM 11 C2' A B 662 36.282 113.622 33.513 1.00 31.41 C
ATOM 12 O2' A B 662 36.092 113.162 34.832 1.00 32.36 O
ATOM 13 C1' A B 662 37.711 114.126 33.340 1.00 32.92 C
ATOM 14 N9 A B 662 37.911 115.503 33.785 1.00 33.17 N
ATOM 15 C8 A B 662 37.204 116.637 33.466 1.00 31.29 C
ATOM 16 N7 A B 662 37.619 117.710 34.091 1.00 30.45 N
ATOM 17 C5 A B 662 38.678 117.255 34.863 1.00 31.94 C
ATOM 18 C6 A B 662 39.538 117.902 35.765 1.00 30.87 C
ATOM 19 N6 A B 662 39.458 119.193 36.064 1.00 30.72 N
ATOM 20 N1 A B 662 40.494 117.161 36.360 1.00 31.40 N
ATOM 21 C2 A B 662 40.569 115.856 36.071 1.00 32.41 C
ATOM 22 N3 A B 662 39.814 115.131 35.250 1.00 32.46 N
ATOM 23 C4 A B 662 38.876 115.901 34.672 1.00 32.43 C
ATOM 24 P U B 663 36.366 109.903 32.582 1.00 35.45 P
ATOM 25 OP1 U B 663 37.286 108.927 33.212 1.00 34.78 O
ATOM 26 OP2 U B 663 36.169 109.886 31.105 1.00 34.46 O
ATOM 27 O5' U B 663 34.932 109.797 33.267 1.00 33.97 O
TER
Atoms:
C2: (42.436,121.641,38.258)
OP1: (48.280,118.368,42.154)
OP2: (47.926,120.850,41.612)
C4: (43.833,123.464,38.644)
O5': (46.182,119.180,41.077)
C3': (44.619,118.110,38.805)
C1': (42.804,119.478,39.371)
O4': (43.412,119.026,40.574)
C5': (45.470,117.944,41.220)
P: (47.381,119.545,42.055)
O2: (41.465,121.110,37.697)
C4': (44.298,117.910,40.277)
C2': (43.273,118.544,38.257)
O2': (42.368,117.465,38.136)
N1: (43.218,120.872,39.113)
N3: (42.759,122.938,38.049)
N4: (44.096,124.760,38.425)
C6: (44.336,121.411,39.699)
C5: (44.679,122.690,39.493)
O3': (45.108,116.948,38.164)
OP1: (48.280,118.368,42.154)
OP2: (47.926,120.850,41.612)
C4: (43.833,123.464,38.644)
O5': (46.182,119.180,41.077)
C3': (44.619,118.110,38.805)
C1': (42.804,119.478,39.371)
O4': (43.412,119.026,40.574)
C5': (45.470,117.944,41.220)
P: (47.381,119.545,42.055)
O2: (41.465,121.110,37.697)
C4': (44.298,117.910,40.277)
C2': (43.273,118.544,38.257)
O2': (42.368,117.465,38.136)
N1: (43.218,120.872,39.113)
N3: (42.759,122.938,38.049)
N4: (44.096,124.760,38.425)
C6: (44.336,121.411,39.699)
C5: (44.679,122.690,39.493)
O3': (45.108,116.948,38.164)
OP1: (33.590,116.415,30.788)
OP2: (36.047,116.937,30.194)
C3': (36.245,112.508,32.477)
C1': (37.711,114.126,33.340)
C5': (36.311,113.794,30.270)
O4': (37.996,114.039,31.962)
C8: (37.204,116.637,33.466)
O2': (36.092,113.162,34.832)
C6: (39.538,117.902,35.765)
C5: (38.678,117.255,34.863)
C4: (38.876,115.901,34.672)
P: (34.881,116.005,30.160)
C4': (37.093,113.086,31.343)
C2': (36.282,113.622,33.513)
C2: (40.569,115.856,36.071)
N1: (40.494,117.161,36.360)
N3: (39.814,115.131,35.250)
N6: (39.458,119.193,36.064)
N7: (37.619,117.710,34.091)
N9: (37.911,115.503,33.785)
O5': (35.344,114.666,30.876)
O3': (36.885,111.357,33.004)
OP2: (36.047,116.937,30.194)
C3': (36.245,112.508,32.477)
C1': (37.711,114.126,33.340)
C5': (36.311,113.794,30.270)
O4': (37.996,114.039,31.962)
C8: (37.204,116.637,33.466)
O2': (36.092,113.162,34.832)
C6: (39.538,117.902,35.765)
C5: (38.678,117.255,34.863)
C4: (38.876,115.901,34.672)
P: (34.881,116.005,30.160)
C4': (37.093,113.086,31.343)
C2': (36.282,113.622,33.513)
C2: (40.569,115.856,36.071)
N1: (40.494,117.161,36.360)
N3: (39.814,115.131,35.250)
N6: (39.458,119.193,36.064)
N7: (37.619,117.710,34.091)
N9: (37.911,115.503,33.785)
O5': (35.344,114.666,30.876)
O3': (36.885,111.357,33.004)
Image (generated by PyMOL):