Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RW6:H8:H54
Extra
PDB:
ATOM 1 O3' A A 7 4.778 3.581 -14.225 1.00 44.65 O
ATOM 2 P C A 8 4.742 3.733 -12.624 1.00 62.07 P
ATOM 3 OP1 C A 8 5.591 4.881 -12.236 1.00 59.55 O
ATOM 4 OP2 C A 8 5.016 2.400 -12.034 1.00 62.26 O
ATOM 5 O5' C A 8 3.211 4.085 -12.295 1.00 52.84 O
ATOM 6 C5' C A 8 2.646 5.328 -12.669 1.00 49.21 C
ATOM 7 C4' C A 8 1.134 5.260 -12.580 1.00 45.29 C
ATOM 8 O4' C A 8 0.698 4.162 -13.407 1.00 46.59 O
ATOM 9 C3' C A 8 0.548 4.955 -11.209 1.00 42.37 C
ATOM 10 O3' C A 8 0.383 6.136 -10.414 1.00 35.27 O
ATOM 11 C2' C A 8 -0.802 4.401 -11.617 1.00 39.78 C
ATOM 12 O2' C A 8 -1.652 5.383 -12.155 1.00 38.07 O
ATOM 13 C1' C A 8 -0.398 3.524 -12.782 1.00 47.56 C
ATOM 14 N1 C A 8 -0.109 2.096 -12.402 1.00 47.15 N
ATOM 15 C2 C A 8 -1.215 1.258 -12.244 1.00 40.51 C
ATOM 16 O2 C A 8 -2.345 1.739 -12.419 1.00 36.63 O
ATOM 17 N3 C A 8 -1.016 -0.040 -11.912 1.00 38.89 N
ATOM 18 C4 C A 8 0.227 -0.497 -11.739 1.00 45.13 C
ATOM 19 N4 C A 8 0.375 -1.794 -11.414 1.00 40.86 N
ATOM 20 C5 C A 8 1.371 0.350 -11.895 1.00 46.52 C
ATOM 21 C6 C A 8 1.164 1.628 -12.227 1.00 46.20 C
ATOM 22 P C A 9 0.379 6.002 -8.819 1.00 43.35 P
ATOM 23 OP1 C A 9 0.472 7.366 -8.240 1.00 45.75 O
ATOM 24 OP2 C A 9 1.397 5.000 -8.436 1.00 36.73 O
ATOM 25 O5' C A 9 -1.082 5.420 -8.497 1.00 39.57 O
TER
ATOM 1 O3' A B 53 -10.979 5.175 -18.511 1.00 50.79 O
ATOM 2 P A B 54 -10.066 4.369 -19.565 1.00 53.80 P
ATOM 3 OP1 A B 54 -10.822 4.252 -20.836 1.00 45.63 O
ATOM 4 OP2 A B 54 -9.651 3.114 -18.896 1.00 52.35 O
ATOM 5 O5' A B 54 -8.736 5.262 -19.705 1.00 41.19 O
ATOM 6 C5' A B 54 -8.779 6.649 -20.007 1.00 45.96 C
ATOM 7 C4' A B 54 -7.441 7.341 -19.765 1.00 47.86 C
ATOM 8 O4' A B 54 -7.173 7.508 -18.346 1.00 47.72 O
ATOM 9 C3' A B 54 -6.208 6.628 -20.311 1.00 48.21 C
ATOM 10 O3' A B 54 -6.012 6.982 -21.663 1.00 51.56 O
ATOM 11 C2' A B 54 -5.093 7.195 -19.430 1.00 50.27 C
ATOM 12 O2' A B 54 -4.625 8.474 -19.812 1.00 50.60 O
ATOM 13 C1' A B 54 -5.789 7.292 -18.074 1.00 46.53 C
ATOM 14 N9 A B 54 -5.608 6.088 -17.251 1.00 43.14 N
ATOM 15 C8 A B 54 -6.283 4.901 -17.378 1.00 42.53 C
ATOM 16 N7 A B 54 -5.915 3.994 -16.498 1.00 41.46 N
ATOM 17 C5 A B 54 -4.934 4.618 -15.737 1.00 38.59 C
ATOM 18 C6 A B 54 -4.146 4.190 -14.638 1.00 36.51 C
ATOM 19 N6 A B 54 -4.217 2.971 -14.087 1.00 37.62 N
ATOM 20 N1 A B 54 -3.258 5.064 -14.118 1.00 38.03 N
ATOM 21 C2 A B 54 -3.176 6.290 -14.662 1.00 38.47 C
ATOM 22 N3 A B 54 -3.861 6.803 -15.687 1.00 40.19 N
ATOM 23 C4 A B 54 -4.730 5.910 -16.195 1.00 41.55 C
ATOM 24 P U B 55 -6.103 5.916 -22.842 1.00 73.60 P
ATOM 25 OP1 U B 55 -6.608 6.629 -24.039 1.00 68.74 O
ATOM 26 OP2 U B 55 -6.824 4.701 -22.397 1.00 61.13 O
ATOM 27 O5' U B 55 -4.554 5.546 -23.036 1.00 72.30 O
TER
ATOM 2 P C A 8 4.742 3.733 -12.624 1.00 62.07 P
ATOM 3 OP1 C A 8 5.591 4.881 -12.236 1.00 59.55 O
ATOM 4 OP2 C A 8 5.016 2.400 -12.034 1.00 62.26 O
ATOM 5 O5' C A 8 3.211 4.085 -12.295 1.00 52.84 O
ATOM 6 C5' C A 8 2.646 5.328 -12.669 1.00 49.21 C
ATOM 7 C4' C A 8 1.134 5.260 -12.580 1.00 45.29 C
ATOM 8 O4' C A 8 0.698 4.162 -13.407 1.00 46.59 O
ATOM 9 C3' C A 8 0.548 4.955 -11.209 1.00 42.37 C
ATOM 10 O3' C A 8 0.383 6.136 -10.414 1.00 35.27 O
ATOM 11 C2' C A 8 -0.802 4.401 -11.617 1.00 39.78 C
ATOM 12 O2' C A 8 -1.652 5.383 -12.155 1.00 38.07 O
ATOM 13 C1' C A 8 -0.398 3.524 -12.782 1.00 47.56 C
ATOM 14 N1 C A 8 -0.109 2.096 -12.402 1.00 47.15 N
ATOM 15 C2 C A 8 -1.215 1.258 -12.244 1.00 40.51 C
ATOM 16 O2 C A 8 -2.345 1.739 -12.419 1.00 36.63 O
ATOM 17 N3 C A 8 -1.016 -0.040 -11.912 1.00 38.89 N
ATOM 18 C4 C A 8 0.227 -0.497 -11.739 1.00 45.13 C
ATOM 19 N4 C A 8 0.375 -1.794 -11.414 1.00 40.86 N
ATOM 20 C5 C A 8 1.371 0.350 -11.895 1.00 46.52 C
ATOM 21 C6 C A 8 1.164 1.628 -12.227 1.00 46.20 C
ATOM 22 P C A 9 0.379 6.002 -8.819 1.00 43.35 P
ATOM 23 OP1 C A 9 0.472 7.366 -8.240 1.00 45.75 O
ATOM 24 OP2 C A 9 1.397 5.000 -8.436 1.00 36.73 O
ATOM 25 O5' C A 9 -1.082 5.420 -8.497 1.00 39.57 O
TER
ATOM 1 O3' A B 53 -10.979 5.175 -18.511 1.00 50.79 O
ATOM 2 P A B 54 -10.066 4.369 -19.565 1.00 53.80 P
ATOM 3 OP1 A B 54 -10.822 4.252 -20.836 1.00 45.63 O
ATOM 4 OP2 A B 54 -9.651 3.114 -18.896 1.00 52.35 O
ATOM 5 O5' A B 54 -8.736 5.262 -19.705 1.00 41.19 O
ATOM 6 C5' A B 54 -8.779 6.649 -20.007 1.00 45.96 C
ATOM 7 C4' A B 54 -7.441 7.341 -19.765 1.00 47.86 C
ATOM 8 O4' A B 54 -7.173 7.508 -18.346 1.00 47.72 O
ATOM 9 C3' A B 54 -6.208 6.628 -20.311 1.00 48.21 C
ATOM 10 O3' A B 54 -6.012 6.982 -21.663 1.00 51.56 O
ATOM 11 C2' A B 54 -5.093 7.195 -19.430 1.00 50.27 C
ATOM 12 O2' A B 54 -4.625 8.474 -19.812 1.00 50.60 O
ATOM 13 C1' A B 54 -5.789 7.292 -18.074 1.00 46.53 C
ATOM 14 N9 A B 54 -5.608 6.088 -17.251 1.00 43.14 N
ATOM 15 C8 A B 54 -6.283 4.901 -17.378 1.00 42.53 C
ATOM 16 N7 A B 54 -5.915 3.994 -16.498 1.00 41.46 N
ATOM 17 C5 A B 54 -4.934 4.618 -15.737 1.00 38.59 C
ATOM 18 C6 A B 54 -4.146 4.190 -14.638 1.00 36.51 C
ATOM 19 N6 A B 54 -4.217 2.971 -14.087 1.00 37.62 N
ATOM 20 N1 A B 54 -3.258 5.064 -14.118 1.00 38.03 N
ATOM 21 C2 A B 54 -3.176 6.290 -14.662 1.00 38.47 C
ATOM 22 N3 A B 54 -3.861 6.803 -15.687 1.00 40.19 N
ATOM 23 C4 A B 54 -4.730 5.910 -16.195 1.00 41.55 C
ATOM 24 P U B 55 -6.103 5.916 -22.842 1.00 73.60 P
ATOM 25 OP1 U B 55 -6.608 6.629 -24.039 1.00 68.74 O
ATOM 26 OP2 U B 55 -6.824 4.701 -22.397 1.00 61.13 O
ATOM 27 O5' U B 55 -4.554 5.546 -23.036 1.00 72.30 O
TER
Atoms:
C2: (-1.215,1.258,-12.244)
OP1: (5.591,4.881,-12.236)
OP2: (5.016,2.400,-12.034)
C4: (0.227,-0.497,-11.739)
O5': (3.211,4.085,-12.295)
C3': (0.548,4.955,-11.209)
C1': (-0.398,3.524,-12.782)
O4': (0.698,4.162,-13.407)
C5': (2.646,5.328,-12.669)
P: (4.742,3.733,-12.624)
O2: (-2.345,1.739,-12.419)
C4': (1.134,5.260,-12.580)
C2': (-0.802,4.401,-11.617)
O2': (-1.652,5.383,-12.155)
N1: (-0.109,2.096,-12.402)
N3: (-1.016,-0.040,-11.912)
N4: (0.375,-1.794,-11.414)
C6: (1.164,1.628,-12.227)
C5: (1.371,0.350,-11.895)
O3': (0.383,6.136,-10.414)
OP1: (5.591,4.881,-12.236)
OP2: (5.016,2.400,-12.034)
C4: (0.227,-0.497,-11.739)
O5': (3.211,4.085,-12.295)
C3': (0.548,4.955,-11.209)
C1': (-0.398,3.524,-12.782)
O4': (0.698,4.162,-13.407)
C5': (2.646,5.328,-12.669)
P: (4.742,3.733,-12.624)
O2: (-2.345,1.739,-12.419)
C4': (1.134,5.260,-12.580)
C2': (-0.802,4.401,-11.617)
O2': (-1.652,5.383,-12.155)
N1: (-0.109,2.096,-12.402)
N3: (-1.016,-0.040,-11.912)
N4: (0.375,-1.794,-11.414)
C6: (1.164,1.628,-12.227)
C5: (1.371,0.350,-11.895)
O3': (0.383,6.136,-10.414)
OP1: (-10.822,4.252,-20.836)
OP2: (-9.651,3.114,-18.896)
C3': (-6.208,6.628,-20.311)
C1': (-5.789,7.292,-18.074)
C5': (-8.779,6.649,-20.007)
O4': (-7.173,7.508,-18.346)
C8: (-6.283,4.901,-17.378)
O2': (-4.625,8.474,-19.812)
C6: (-4.146,4.190,-14.638)
C5: (-4.934,4.618,-15.737)
C4: (-4.730,5.910,-16.195)
P: (-10.066,4.369,-19.565)
C4': (-7.441,7.341,-19.765)
C2': (-5.093,7.195,-19.430)
C2: (-3.176,6.290,-14.662)
N1: (-3.258,5.064,-14.118)
N3: (-3.861,6.803,-15.687)
N6: (-4.217,2.971,-14.087)
N7: (-5.915,3.994,-16.498)
N9: (-5.608,6.088,-17.251)
O5': (-8.736,5.262,-19.705)
O3': (-6.012,6.982,-21.663)
OP2: (-9.651,3.114,-18.896)
C3': (-6.208,6.628,-20.311)
C1': (-5.789,7.292,-18.074)
C5': (-8.779,6.649,-20.007)
O4': (-7.173,7.508,-18.346)
C8: (-6.283,4.901,-17.378)
O2': (-4.625,8.474,-19.812)
C6: (-4.146,4.190,-14.638)
C5: (-4.934,4.618,-15.737)
C4: (-4.730,5.910,-16.195)
P: (-10.066,4.369,-19.565)
C4': (-7.441,7.341,-19.765)
C2': (-5.093,7.195,-19.430)
C2: (-3.176,6.290,-14.662)
N1: (-3.258,5.064,-14.118)
N3: (-3.861,6.803,-15.687)
N6: (-4.217,2.971,-14.087)
N7: (-5.915,3.994,-16.498)
N9: (-5.608,6.088,-17.251)
O5': (-8.736,5.262,-19.705)
O3': (-6.012,6.982,-21.663)
Image (generated by PyMOL):