Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0984:0930
Extra
PDB:
ATOM 1 O3' G A 983 19.807 70.349 92.379 1.00 48.68 O
ATOM 2 P C A 984 18.915 70.838 91.137 1.00 49.26 P
ATOM 3 OP1 C A 984 17.792 71.635 91.706 1.00 46.97 O
ATOM 4 OP2 C A 984 18.626 69.644 90.301 1.00 47.94 O
ATOM 5 O5' C A 984 19.879 71.798 90.301 1.00 47.36 O
ATOM 6 C5' C A 984 20.354 73.049 90.846 1.00 45.86 C
ATOM 7 C4' C A 984 21.587 73.514 90.100 1.00 45.66 C
ATOM 8 O4' C A 984 22.638 72.531 90.261 1.00 46.26 O
ATOM 9 C3' C A 984 21.455 73.666 88.592 1.00 44.61 C
ATOM 10 O3' C A 984 20.891 74.926 88.240 1.00 43.53 O
ATOM 11 C2' C A 984 22.900 73.553 88.133 1.00 45.88 C
ATOM 12 O2' C A 984 23.646 74.736 88.313 1.00 47.55 O
ATOM 13 C1' C A 984 23.438 72.497 89.095 1.00 47.04 C
ATOM 14 N1 C A 984 23.384 71.152 88.509 1.00 49.84 N
ATOM 15 C2 C A 984 24.326 70.820 87.537 1.00 52.63 C
ATOM 16 O2 C A 984 25.188 71.651 87.238 1.00 54.50 O
ATOM 17 N3 C A 984 24.275 69.605 86.945 1.00 54.01 N
ATOM 18 C4 C A 984 23.333 68.734 87.298 1.00 53.49 C
ATOM 19 N4 C A 984 23.312 67.555 86.673 1.00 53.54 N
ATOM 20 C5 C A 984 22.369 69.035 88.308 1.00 53.58 C
ATOM 21 C6 C A 984 22.432 70.245 88.883 1.00 51.48 C
ATOM 22 P U A 985 19.917 75.044 86.965 1.00 42.01 P
ATOM 23 OP1 U A 985 19.297 76.393 86.991 1.00 40.75 O
ATOM 24 OP2 U A 985 19.055 73.845 86.941 1.00 42.82 O
ATOM 25 O5' U A 985 20.896 74.971 85.714 1.00 41.42 O
TER
ATOM 1 O3' U B 929 33.733 71.177 87.511 1.00 54.49 O
ATOM 2 P A B 930 35.051 72.000 87.915 1.00 54.82 P
ATOM 3 OP1 A B 930 35.395 72.931 86.809 1.00 53.37 O
ATOM 4 OP2 A B 930 36.064 71.036 88.409 1.00 52.94 O
ATOM 5 O5' A B 930 34.567 72.884 89.141 1.00 52.73 O
ATOM 6 C5' A B 930 35.329 74.008 89.576 1.00 48.66 C
ATOM 7 C4' A B 930 34.454 74.943 90.357 1.00 47.62 C
ATOM 8 O4' A B 930 33.387 75.427 89.501 1.00 47.80 O
ATOM 9 C3' A B 930 33.699 74.310 91.504 1.00 45.79 C
ATOM 10 O3' A B 930 34.498 74.085 92.637 1.00 44.62 O
ATOM 11 C2' A B 930 32.573 75.300 91.723 1.00 47.13 C
ATOM 12 O2' A B 930 32.962 76.462 92.432 1.00 45.59 O
ATOM 13 C1' A B 930 32.216 75.632 90.273 1.00 47.79 C
ATOM 14 N9 A B 930 31.191 74.721 89.773 1.00 51.19 N
ATOM 15 C8 A B 930 31.260 73.351 89.625 1.00 52.20 C
ATOM 16 N7 A B 930 30.151 72.810 89.189 1.00 51.90 N
ATOM 17 C5 A B 930 29.300 73.894 89.026 1.00 53.73 C
ATOM 18 C6 A B 930 27.972 73.986 88.598 1.00 55.71 C
ATOM 19 N6 A B 930 27.248 72.931 88.233 1.00 58.48 N
ATOM 20 N1 A B 930 27.404 75.213 88.560 1.00 56.96 N
ATOM 21 C2 A B 930 28.143 76.271 88.931 1.00 57.81 C
ATOM 22 N3 A B 930 29.407 76.312 89.351 1.00 54.95 N
ATOM 23 C4 A B 930 29.931 75.076 89.376 1.00 53.20 C
ATOM 24 P G B 931 34.426 72.660 93.356 1.00 46.27 P
ATOM 25 OP1 G B 931 35.454 72.578 94.429 1.00 46.21 O
ATOM 26 OP2 G B 931 34.421 71.644 92.275 1.00 47.24 O
ATOM 27 O5' G B 931 32.977 72.671 94.015 1.00 46.44 O
TER
ATOM 2 P C A 984 18.915 70.838 91.137 1.00 49.26 P
ATOM 3 OP1 C A 984 17.792 71.635 91.706 1.00 46.97 O
ATOM 4 OP2 C A 984 18.626 69.644 90.301 1.00 47.94 O
ATOM 5 O5' C A 984 19.879 71.798 90.301 1.00 47.36 O
ATOM 6 C5' C A 984 20.354 73.049 90.846 1.00 45.86 C
ATOM 7 C4' C A 984 21.587 73.514 90.100 1.00 45.66 C
ATOM 8 O4' C A 984 22.638 72.531 90.261 1.00 46.26 O
ATOM 9 C3' C A 984 21.455 73.666 88.592 1.00 44.61 C
ATOM 10 O3' C A 984 20.891 74.926 88.240 1.00 43.53 O
ATOM 11 C2' C A 984 22.900 73.553 88.133 1.00 45.88 C
ATOM 12 O2' C A 984 23.646 74.736 88.313 1.00 47.55 O
ATOM 13 C1' C A 984 23.438 72.497 89.095 1.00 47.04 C
ATOM 14 N1 C A 984 23.384 71.152 88.509 1.00 49.84 N
ATOM 15 C2 C A 984 24.326 70.820 87.537 1.00 52.63 C
ATOM 16 O2 C A 984 25.188 71.651 87.238 1.00 54.50 O
ATOM 17 N3 C A 984 24.275 69.605 86.945 1.00 54.01 N
ATOM 18 C4 C A 984 23.333 68.734 87.298 1.00 53.49 C
ATOM 19 N4 C A 984 23.312 67.555 86.673 1.00 53.54 N
ATOM 20 C5 C A 984 22.369 69.035 88.308 1.00 53.58 C
ATOM 21 C6 C A 984 22.432 70.245 88.883 1.00 51.48 C
ATOM 22 P U A 985 19.917 75.044 86.965 1.00 42.01 P
ATOM 23 OP1 U A 985 19.297 76.393 86.991 1.00 40.75 O
ATOM 24 OP2 U A 985 19.055 73.845 86.941 1.00 42.82 O
ATOM 25 O5' U A 985 20.896 74.971 85.714 1.00 41.42 O
TER
ATOM 1 O3' U B 929 33.733 71.177 87.511 1.00 54.49 O
ATOM 2 P A B 930 35.051 72.000 87.915 1.00 54.82 P
ATOM 3 OP1 A B 930 35.395 72.931 86.809 1.00 53.37 O
ATOM 4 OP2 A B 930 36.064 71.036 88.409 1.00 52.94 O
ATOM 5 O5' A B 930 34.567 72.884 89.141 1.00 52.73 O
ATOM 6 C5' A B 930 35.329 74.008 89.576 1.00 48.66 C
ATOM 7 C4' A B 930 34.454 74.943 90.357 1.00 47.62 C
ATOM 8 O4' A B 930 33.387 75.427 89.501 1.00 47.80 O
ATOM 9 C3' A B 930 33.699 74.310 91.504 1.00 45.79 C
ATOM 10 O3' A B 930 34.498 74.085 92.637 1.00 44.62 O
ATOM 11 C2' A B 930 32.573 75.300 91.723 1.00 47.13 C
ATOM 12 O2' A B 930 32.962 76.462 92.432 1.00 45.59 O
ATOM 13 C1' A B 930 32.216 75.632 90.273 1.00 47.79 C
ATOM 14 N9 A B 930 31.191 74.721 89.773 1.00 51.19 N
ATOM 15 C8 A B 930 31.260 73.351 89.625 1.00 52.20 C
ATOM 16 N7 A B 930 30.151 72.810 89.189 1.00 51.90 N
ATOM 17 C5 A B 930 29.300 73.894 89.026 1.00 53.73 C
ATOM 18 C6 A B 930 27.972 73.986 88.598 1.00 55.71 C
ATOM 19 N6 A B 930 27.248 72.931 88.233 1.00 58.48 N
ATOM 20 N1 A B 930 27.404 75.213 88.560 1.00 56.96 N
ATOM 21 C2 A B 930 28.143 76.271 88.931 1.00 57.81 C
ATOM 22 N3 A B 930 29.407 76.312 89.351 1.00 54.95 N
ATOM 23 C4 A B 930 29.931 75.076 89.376 1.00 53.20 C
ATOM 24 P G B 931 34.426 72.660 93.356 1.00 46.27 P
ATOM 25 OP1 G B 931 35.454 72.578 94.429 1.00 46.21 O
ATOM 26 OP2 G B 931 34.421 71.644 92.275 1.00 47.24 O
ATOM 27 O5' G B 931 32.977 72.671 94.015 1.00 46.44 O
TER
Atoms:
C2: (24.326,70.820,87.537)
OP1: (17.792,71.635,91.706)
OP2: (18.626,69.644,90.301)
C4: (23.333,68.734,87.298)
O5': (19.879,71.798,90.301)
C3': (21.455,73.666,88.592)
C1': (23.438,72.497,89.095)
O4': (22.638,72.531,90.261)
C5': (20.354,73.049,90.846)
P: (18.915,70.838,91.137)
O2: (25.188,71.651,87.238)
C4': (21.587,73.514,90.100)
C2': (22.900,73.553,88.133)
O2': (23.646,74.736,88.313)
N1: (23.384,71.152,88.509)
N3: (24.275,69.605,86.945)
N4: (23.312,67.555,86.673)
C6: (22.432,70.245,88.883)
C5: (22.369,69.035,88.308)
O3': (20.891,74.926,88.240)
OP1: (17.792,71.635,91.706)
OP2: (18.626,69.644,90.301)
C4: (23.333,68.734,87.298)
O5': (19.879,71.798,90.301)
C3': (21.455,73.666,88.592)
C1': (23.438,72.497,89.095)
O4': (22.638,72.531,90.261)
C5': (20.354,73.049,90.846)
P: (18.915,70.838,91.137)
O2: (25.188,71.651,87.238)
C4': (21.587,73.514,90.100)
C2': (22.900,73.553,88.133)
O2': (23.646,74.736,88.313)
N1: (23.384,71.152,88.509)
N3: (24.275,69.605,86.945)
N4: (23.312,67.555,86.673)
C6: (22.432,70.245,88.883)
C5: (22.369,69.035,88.308)
O3': (20.891,74.926,88.240)
OP1: (35.395,72.931,86.809)
OP2: (36.064,71.036,88.409)
C3': (33.699,74.310,91.504)
C1': (32.216,75.632,90.273)
C5': (35.329,74.008,89.576)
O4': (33.387,75.427,89.501)
C8: (31.260,73.351,89.625)
O2': (32.962,76.462,92.432)
C6: (27.972,73.986,88.598)
C5: (29.300,73.894,89.026)
C4: (29.931,75.076,89.376)
P: (35.051,72.000,87.915)
C4': (34.454,74.943,90.357)
C2': (32.573,75.300,91.723)
C2: (28.143,76.271,88.931)
N1: (27.404,75.213,88.560)
N3: (29.407,76.312,89.351)
N6: (27.248,72.931,88.233)
N7: (30.151,72.810,89.189)
N9: (31.191,74.721,89.773)
O5': (34.567,72.884,89.141)
O3': (34.498,74.085,92.637)
OP2: (36.064,71.036,88.409)
C3': (33.699,74.310,91.504)
C1': (32.216,75.632,90.273)
C5': (35.329,74.008,89.576)
O4': (33.387,75.427,89.501)
C8: (31.260,73.351,89.625)
O2': (32.962,76.462,92.432)
C6: (27.972,73.986,88.598)
C5: (29.300,73.894,89.026)
C4: (29.931,75.076,89.376)
P: (35.051,72.000,87.915)
C4': (34.454,74.943,90.357)
C2': (32.573,75.300,91.723)
C2: (28.143,76.271,88.931)
N1: (27.404,75.213,88.560)
N3: (29.407,76.312,89.351)
N6: (27.248,72.931,88.233)
N7: (30.151,72.810,89.189)
N9: (31.191,74.721,89.773)
O5': (34.567,72.884,89.141)
O3': (34.498,74.085,92.637)
Image (generated by PyMOL):