Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:928:955
Extra
PDB:
ATOM 1 O3' U A 27 70.265 17.309 101.141 1.00 71.48 O
ATOM 2 P C A 28 71.568 17.154 100.222 1.00 70.79 P
ATOM 3 OP1 C A 28 71.916 18.499 99.717 1.00 71.07 O
ATOM 4 OP2 C A 28 71.337 16.048 99.256 1.00 70.66 O
ATOM 5 O5' C A 28 72.690 16.722 101.265 1.00 72.87 O
ATOM 6 C5' C A 28 72.940 17.519 102.440 1.00 74.72 C
ATOM 7 C4' C A 28 72.873 16.663 103.688 1.00 76.78 C
ATOM 8 O4' C A 28 71.596 15.958 103.728 1.00 77.06 O
ATOM 9 C3' C A 28 73.895 15.543 103.812 1.00 76.39 C
ATOM 10 O3' C A 28 75.179 15.991 104.253 1.00 75.84 O
ATOM 11 C2' C A 28 73.227 14.623 104.826 1.00 75.82 C
ATOM 12 O2' C A 28 73.335 15.096 106.153 1.00 74.02 O
ATOM 13 C1' C A 28 71.764 14.707 104.383 1.00 76.73 C
ATOM 14 N1 C A 28 71.371 13.615 103.464 1.00 77.42 N
ATOM 15 C2 C A 28 71.281 12.304 103.971 1.00 77.85 C
ATOM 16 O2 C A 28 71.548 12.098 105.168 1.00 78.34 O
ATOM 17 N3 C A 28 70.910 11.299 103.145 1.00 77.78 N
ATOM 18 C4 C A 28 70.634 11.554 101.865 1.00 77.54 C
ATOM 19 N4 C A 28 70.261 10.531 101.094 1.00 77.19 N
ATOM 20 C5 C A 28 70.725 12.871 101.320 1.00 77.54 C
ATOM 21 C6 C A 28 71.094 13.860 102.146 1.00 77.60 C
ATOM 22 P C A 29 76.510 15.361 103.596 1.00 76.16 P
ATOM 23 OP1 C A 29 77.610 15.513 104.577 1.00 75.12 O
ATOM 24 OP2 C A 29 76.679 15.883 102.216 1.00 75.43 O
ATOM 25 O5' C A 29 76.188 13.809 103.458 1.00 77.52 O
TER
ATOM 1 O3' U B 54 65.883 12.033 113.345 1.00 83.45 O
ATOM 2 P A B 55 66.279 12.374 114.862 1.00 82.59 P
ATOM 3 OP1 A B 55 66.037 11.156 115.676 1.00 83.00 O
ATOM 4 OP2 A B 55 65.611 13.647 115.239 1.00 83.81 O
ATOM 5 O5' A B 55 67.852 12.618 114.792 1.00 80.88 O
ATOM 6 C5' A B 55 68.577 13.100 115.941 1.00 79.34 C
ATOM 7 C4' A B 55 69.699 14.019 115.511 1.00 77.90 C
ATOM 8 O4' A B 55 70.641 13.276 114.704 1.00 77.30 O
ATOM 9 C3' A B 55 69.297 15.190 114.632 1.00 77.69 C
ATOM 10 O3' A B 55 68.831 16.284 115.411 1.00 77.42 O
ATOM 11 C2' A B 55 70.593 15.508 113.901 1.00 77.22 C
ATOM 12 O2' A B 55 71.503 16.252 114.684 1.00 77.43 O
ATOM 13 C1' A B 55 71.157 14.106 113.679 1.00 76.46 C
ATOM 14 N9 A B 55 70.782 13.514 112.397 1.00 76.14 N
ATOM 15 C8 A B 55 69.876 12.504 112.180 1.00 76.05 C
ATOM 16 N7 A B 55 69.772 12.148 110.924 1.00 76.23 N
ATOM 17 C5 A B 55 70.661 12.986 110.266 1.00 75.75 C
ATOM 18 C6 A B 55 71.022 13.105 108.914 1.00 75.21 C
ATOM 19 N6 A B 55 70.516 12.341 107.941 1.00 75.16 N
ATOM 20 N1 A B 55 71.935 14.045 108.590 1.00 74.90 N
ATOM 21 C2 A B 55 72.447 14.803 109.566 1.00 75.32 C
ATOM 22 N3 A B 55 72.193 14.782 110.871 1.00 75.42 N
ATOM 23 C4 A B 55 71.281 13.840 111.160 1.00 75.75 C
ATOM 24 P A B 56 67.513 17.081 114.959 1.00 77.61 P
ATOM 25 OP1 A B 56 67.050 17.868 116.130 1.00 78.45 O
ATOM 26 OP2 A B 56 66.578 16.130 114.297 1.00 77.46 O
ATOM 27 O5' A B 56 68.038 18.087 113.844 1.00 77.10 O
TER
ATOM 2 P C A 28 71.568 17.154 100.222 1.00 70.79 P
ATOM 3 OP1 C A 28 71.916 18.499 99.717 1.00 71.07 O
ATOM 4 OP2 C A 28 71.337 16.048 99.256 1.00 70.66 O
ATOM 5 O5' C A 28 72.690 16.722 101.265 1.00 72.87 O
ATOM 6 C5' C A 28 72.940 17.519 102.440 1.00 74.72 C
ATOM 7 C4' C A 28 72.873 16.663 103.688 1.00 76.78 C
ATOM 8 O4' C A 28 71.596 15.958 103.728 1.00 77.06 O
ATOM 9 C3' C A 28 73.895 15.543 103.812 1.00 76.39 C
ATOM 10 O3' C A 28 75.179 15.991 104.253 1.00 75.84 O
ATOM 11 C2' C A 28 73.227 14.623 104.826 1.00 75.82 C
ATOM 12 O2' C A 28 73.335 15.096 106.153 1.00 74.02 O
ATOM 13 C1' C A 28 71.764 14.707 104.383 1.00 76.73 C
ATOM 14 N1 C A 28 71.371 13.615 103.464 1.00 77.42 N
ATOM 15 C2 C A 28 71.281 12.304 103.971 1.00 77.85 C
ATOM 16 O2 C A 28 71.548 12.098 105.168 1.00 78.34 O
ATOM 17 N3 C A 28 70.910 11.299 103.145 1.00 77.78 N
ATOM 18 C4 C A 28 70.634 11.554 101.865 1.00 77.54 C
ATOM 19 N4 C A 28 70.261 10.531 101.094 1.00 77.19 N
ATOM 20 C5 C A 28 70.725 12.871 101.320 1.00 77.54 C
ATOM 21 C6 C A 28 71.094 13.860 102.146 1.00 77.60 C
ATOM 22 P C A 29 76.510 15.361 103.596 1.00 76.16 P
ATOM 23 OP1 C A 29 77.610 15.513 104.577 1.00 75.12 O
ATOM 24 OP2 C A 29 76.679 15.883 102.216 1.00 75.43 O
ATOM 25 O5' C A 29 76.188 13.809 103.458 1.00 77.52 O
TER
ATOM 1 O3' U B 54 65.883 12.033 113.345 1.00 83.45 O
ATOM 2 P A B 55 66.279 12.374 114.862 1.00 82.59 P
ATOM 3 OP1 A B 55 66.037 11.156 115.676 1.00 83.00 O
ATOM 4 OP2 A B 55 65.611 13.647 115.239 1.00 83.81 O
ATOM 5 O5' A B 55 67.852 12.618 114.792 1.00 80.88 O
ATOM 6 C5' A B 55 68.577 13.100 115.941 1.00 79.34 C
ATOM 7 C4' A B 55 69.699 14.019 115.511 1.00 77.90 C
ATOM 8 O4' A B 55 70.641 13.276 114.704 1.00 77.30 O
ATOM 9 C3' A B 55 69.297 15.190 114.632 1.00 77.69 C
ATOM 10 O3' A B 55 68.831 16.284 115.411 1.00 77.42 O
ATOM 11 C2' A B 55 70.593 15.508 113.901 1.00 77.22 C
ATOM 12 O2' A B 55 71.503 16.252 114.684 1.00 77.43 O
ATOM 13 C1' A B 55 71.157 14.106 113.679 1.00 76.46 C
ATOM 14 N9 A B 55 70.782 13.514 112.397 1.00 76.14 N
ATOM 15 C8 A B 55 69.876 12.504 112.180 1.00 76.05 C
ATOM 16 N7 A B 55 69.772 12.148 110.924 1.00 76.23 N
ATOM 17 C5 A B 55 70.661 12.986 110.266 1.00 75.75 C
ATOM 18 C6 A B 55 71.022 13.105 108.914 1.00 75.21 C
ATOM 19 N6 A B 55 70.516 12.341 107.941 1.00 75.16 N
ATOM 20 N1 A B 55 71.935 14.045 108.590 1.00 74.90 N
ATOM 21 C2 A B 55 72.447 14.803 109.566 1.00 75.32 C
ATOM 22 N3 A B 55 72.193 14.782 110.871 1.00 75.42 N
ATOM 23 C4 A B 55 71.281 13.840 111.160 1.00 75.75 C
ATOM 24 P A B 56 67.513 17.081 114.959 1.00 77.61 P
ATOM 25 OP1 A B 56 67.050 17.868 116.130 1.00 78.45 O
ATOM 26 OP2 A B 56 66.578 16.130 114.297 1.00 77.46 O
ATOM 27 O5' A B 56 68.038 18.087 113.844 1.00 77.10 O
TER
Atoms:
C2: (71.281,12.304,103.971)
OP1: (71.916,18.499,99.717)
OP2: (71.337,16.048,99.256)
C4: (70.634,11.554,101.865)
O5': (72.690,16.722,101.265)
C3': (73.895,15.543,103.812)
C1': (71.764,14.707,104.383)
O4': (71.596,15.958,103.728)
C5': (72.940,17.519,102.440)
P: (71.568,17.154,100.222)
O2: (71.548,12.098,105.168)
C4': (72.873,16.663,103.688)
C2': (73.227,14.623,104.826)
O2': (73.335,15.096,106.153)
N1: (71.371,13.615,103.464)
N3: (70.910,11.299,103.145)
N4: (70.261,10.531,101.094)
C6: (71.094,13.860,102.146)
C5: (70.725,12.871,101.320)
O3': (75.179,15.991,104.253)
OP1: (71.916,18.499,99.717)
OP2: (71.337,16.048,99.256)
C4: (70.634,11.554,101.865)
O5': (72.690,16.722,101.265)
C3': (73.895,15.543,103.812)
C1': (71.764,14.707,104.383)
O4': (71.596,15.958,103.728)
C5': (72.940,17.519,102.440)
P: (71.568,17.154,100.222)
O2: (71.548,12.098,105.168)
C4': (72.873,16.663,103.688)
C2': (73.227,14.623,104.826)
O2': (73.335,15.096,106.153)
N1: (71.371,13.615,103.464)
N3: (70.910,11.299,103.145)
N4: (70.261,10.531,101.094)
C6: (71.094,13.860,102.146)
C5: (70.725,12.871,101.320)
O3': (75.179,15.991,104.253)
OP1: (66.037,11.156,115.676)
OP2: (65.611,13.647,115.239)
C3': (69.297,15.190,114.632)
C1': (71.157,14.106,113.679)
C5': (68.577,13.100,115.941)
O4': (70.641,13.276,114.704)
C8: (69.876,12.504,112.180)
O2': (71.503,16.252,114.684)
C6: (71.022,13.105,108.914)
C5: (70.661,12.986,110.266)
C4: (71.281,13.840,111.160)
P: (66.279,12.374,114.862)
C4': (69.699,14.019,115.511)
C2': (70.593,15.508,113.901)
C2: (72.447,14.803,109.566)
N1: (71.935,14.045,108.590)
N3: (72.193,14.782,110.871)
N6: (70.516,12.341,107.941)
N7: (69.772,12.148,110.924)
N9: (70.782,13.514,112.397)
O5': (67.852,12.618,114.792)
O3': (68.831,16.284,115.411)
OP2: (65.611,13.647,115.239)
C3': (69.297,15.190,114.632)
C1': (71.157,14.106,113.679)
C5': (68.577,13.100,115.941)
O4': (70.641,13.276,114.704)
C8: (69.876,12.504,112.180)
O2': (71.503,16.252,114.684)
C6: (71.022,13.105,108.914)
C5: (70.661,12.986,110.266)
C4: (71.281,13.840,111.160)
P: (66.279,12.374,114.862)
C4': (69.699,14.019,115.511)
C2': (70.593,15.508,113.901)
C2: (72.447,14.803,109.566)
N1: (71.935,14.045,108.590)
N3: (72.193,14.782,110.871)
N6: (70.516,12.341,107.941)
N7: (69.772,12.148,110.924)
N9: (70.782,13.514,112.397)
O5': (67.852,12.618,114.792)
O3': (68.831,16.284,115.411)
Image (generated by PyMOL):