ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:A2110:A1778

Extra

PDB:
ATOM 1 O3' U A2109 -80.199 -24.258 62.384 1.00 16.81 O
ATOM 2 P U A2110 -80.919 -24.340 60.953 1.00 11.85 P
ATOM 3 OP1 U A2110 -82.179 -25.114 61.164 1.00 26.67 O
ATOM 4 OP2 U A2110 -79.931 -24.788 59.945 1.00 26.67 O
ATOM 5 O5' U A2110 -81.320 -22.846 60.608 1.00 1.84 O
ATOM 6 C5' U A2110 -82.364 -22.217 61.334 1.00 1.84 C
ATOM 7 C4' U A2110 -82.795 -20.943 60.654 1.00 1.84 C
ATOM 8 O4' U A2110 -81.720 -19.973 60.645 1.00 1.84 O
ATOM 9 C3' U A2110 -83.242 -21.029 59.211 1.00 1.84 C
ATOM 10 O3' U A2110 -84.599 -21.457 59.189 1.00 1.84 O
ATOM 11 C2' U A2110 -83.084 -19.579 58.745 1.00 1.84 C
ATOM 12 O2' U A2110 -84.132 -18.758 59.212 1.00 1.84 O
ATOM 13 C1' U A2110 -81.865 -19.117 59.535 1.00 1.84 C
ATOM 14 N1 U A2110 -80.614 -19.111 58.775 1.00 4.04 N
ATOM 15 C2 U A2110 -80.430 -18.092 57.898 1.00 4.04 C
ATOM 16 O2 U A2110 -81.274 -17.246 57.708 1.00 4.04 O
ATOM 17 N3 U A2110 -79.230 -18.103 57.236 1.00 4.04 N
ATOM 18 C4 U A2110 -78.225 -19.044 57.365 1.00 4.04 C
ATOM 19 O4 U A2110 -77.168 -18.921 56.724 1.00 4.04 O
ATOM 20 C5 U A2110 -78.516 -20.080 58.288 1.00 4.04 C
ATOM 21 C6 U A2110 -79.671 -20.076 58.942 1.00 4.04 C
ATOM 22 P G A2111 -85.065 -22.558 58.125 1.00 6.75 P
ATOM 23 OP1 G A2111 -86.407 -23.065 58.530 1.00 22.22 O
ATOM 24 OP2 G A2111 -83.938 -23.513 57.940 1.00 22.22 O
ATOM 25 O5' G A2111 -85.204 -21.719 56.783 1.00 9.39 O
TER

ATOM 1 O3' C B1777 -92.087 -15.536 56.549 1.00 65.77 O
ATOM 2 P A B1778 -92.209 -15.767 58.137 1.00 32.84 P
ATOM 3 OP1 A B1778 -93.325 -16.740 58.395 1.00 26.74 O
ATOM 4 OP2 A B1778 -92.197 -14.446 58.826 1.00 26.73 O
ATOM 5 O5' A B1778 -90.850 -16.512 58.479 1.00 38.78 O
ATOM 6 C5' A B1778 -90.546 -17.776 57.870 1.00 38.78 C
ATOM 7 C4' A B1778 -89.240 -18.292 58.394 1.00 38.78 C
ATOM 8 O4' A B1778 -88.139 -17.652 57.718 1.00 38.78 O
ATOM 9 C3' A B1778 -89.018 -18.014 59.866 1.00 38.78 C
ATOM 10 O3' A B1778 -89.693 -19.003 60.638 1.00 38.78 O
ATOM 11 C2' A B1778 -87.500 -18.029 59.982 1.00 38.78 C
ATOM 12 O2' A B1778 -86.989 -19.340 60.089 1.00 38.78 O
ATOM 13 C1' A B1778 -87.079 -17.451 58.629 1.00 38.78 C
ATOM 14 N9 A B1778 -86.767 -16.024 58.641 1.00 26.41 N
ATOM 15 C8 A B1778 -87.622 -14.984 58.398 1.00 26.41 C
ATOM 16 N7 A B1778 -87.050 -13.805 58.448 1.00 26.48 N
ATOM 17 C5 A B1778 -85.731 -14.089 58.753 1.00 26.49 C
ATOM 18 C6 A B1778 -84.616 -13.269 58.943 1.00 26.33 C
ATOM 19 N6 A B1778 -84.644 -11.940 58.841 1.00 26.32 N
ATOM 20 N1 A B1778 -83.450 -13.863 59.244 1.00 26.29 N
ATOM 21 C2 A B1778 -83.419 -15.195 59.344 1.00 26.41 C
ATOM 22 N3 A B1778 -84.398 -16.074 59.184 1.00 26.55 N
ATOM 23 C4 A B1778 -85.544 -15.449 58.884 1.00 26.55 C
ATOM 24 P A B1779 -89.731 -18.884 62.239 1.00 23.25 P
ATOM 25 OP1 A B1779 -90.784 -19.819 62.738 1.00 48.84 O
ATOM 26 OP2 A B1779 -89.768 -17.445 62.638 1.00 48.92 O
ATOM 27 O5' A B1779 -88.323 -19.514 62.627 1.00 21.14 O
TER

Atoms:
C4: (-78.225,-19.044,57.365)
N3: (-79.230,-18.103,57.236)
OP1: (-82.179,-25.114,61.164)
OP2: (-79.931,-24.788,59.945)
C2: (-80.430,-18.092,57.898)
C1': (-81.865,-19.117,59.535)
C3': (-83.242,-21.029,59.211)
O5': (-81.320,-22.846,60.608)
O4': (-81.720,-19.973,60.645)
C5': (-82.364,-22.217,61.334)
P: (-80.919,-24.340,60.953)
C4': (-82.795,-20.943,60.654)
C2': (-83.084,-19.579,58.745)
O2': (-84.132,-18.758,59.212)
N1: (-80.614,-19.111,58.775)
O4: (-77.168,-18.921,56.724)
O2: (-81.274,-17.246,57.708)
C6: (-79.671,-20.076,58.942)
C5: (-78.516,-20.080,58.288)
O3': (-84.599,-21.457,59.189)
OP1: (-93.325,-16.740,58.395)
OP2: (-92.197,-14.446,58.826)
C3': (-89.018,-18.014,59.866)
C1': (-87.079,-17.451,58.629)
C5': (-90.546,-17.776,57.870)
O4': (-88.139,-17.652,57.718)
C8: (-87.622,-14.984,58.398)
O2': (-86.989,-19.340,60.089)
C6: (-84.616,-13.269,58.943)
C5: (-85.731,-14.089,58.753)
C4: (-85.544,-15.449,58.884)
P: (-92.209,-15.767,58.137)
C4': (-89.240,-18.292,58.394)
C2': (-87.500,-18.029,59.982)
C2: (-83.419,-15.195,59.344)
N1: (-83.450,-13.863,59.244)
N3: (-84.398,-16.074,59.184)
N6: (-84.644,-11.940,58.841)
N7: (-87.050,-13.805,58.448)
N9: (-86.767,-16.024,58.641)
O5': (-90.850,-16.512,58.479)
O3': (-89.693,-19.003,60.638)
Image (generated by PyMOL):
PyMOL image
show in jmol