Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Y26:X48:X52
Extra
PDB:
ATOM 1 O3' C A 47 52.356 -19.324 -2.772 1.00 59.62 O
ATOM 2 P C A 48 53.710 -19.972 -3.321 1.00 59.72 P
ATOM 3 OP1 C A 48 54.766 -19.768 -2.301 1.00 59.45 O
ATOM 4 OP2 C A 48 53.938 -19.525 -4.714 1.00 59.53 O
ATOM 5 O5' C A 48 53.396 -21.527 -3.436 1.00 58.81 O
ATOM 6 C5' C A 48 52.990 -22.364 -2.362 1.00 60.16 C
ATOM 7 C4' C A 48 52.396 -23.615 -2.989 1.00 58.93 C
ATOM 8 O4' C A 48 51.204 -23.276 -3.744 1.00 59.11 O
ATOM 9 C3' C A 48 53.252 -24.282 -4.052 1.00 59.74 C
ATOM 10 O3' C A 48 54.214 -25.086 -3.405 1.00 61.82 O
ATOM 11 C2' C A 48 52.208 -25.148 -4.736 1.00 59.35 C
ATOM 12 O2' C A 48 51.817 -26.190 -3.869 1.00 58.11 O
ATOM 13 C1' C A 48 51.040 -24.170 -4.839 1.00 58.46 C
ATOM 14 N1 C A 48 50.817 -23.428 -6.167 1.00 56.95 N
ATOM 15 C2 C A 48 50.127 -24.050 -7.229 1.00 56.74 C
ATOM 16 O2 C A 48 49.704 -25.209 -7.097 1.00 57.74 O
ATOM 17 N3 C A 48 49.924 -23.372 -8.389 1.00 55.91 N
ATOM 18 C4 C A 48 50.358 -22.111 -8.517 1.00 57.81 C
ATOM 19 N4 C A 48 50.137 -21.471 -9.670 1.00 57.33 N
ATOM 20 C5 C A 48 51.055 -21.452 -7.456 1.00 57.85 C
ATOM 21 C6 C A 48 51.254 -22.142 -6.320 1.00 57.40 C
ATOM 22 P U A 49 55.781 -24.851 -3.583 1.00 61.57 P
ATOM 23 OP1 U A 49 56.391 -25.778 -2.610 1.00 63.21 O
ATOM 24 OP2 U A 49 56.095 -23.396 -3.531 1.00 62.15 O
ATOM 25 O5' U A 49 56.063 -25.395 -5.064 1.00 62.85 O
TER
ATOM 1 O3' A B 51 52.644 -35.415 -5.022 1.00 58.98 O
ATOM 2 P A B 52 51.411 -36.415 -5.189 1.00 57.32 P
ATOM 3 OP1 A B 52 51.776 -37.696 -4.505 1.00 59.45 O
ATOM 4 OP2 A B 52 51.017 -36.478 -6.608 1.00 57.81 O
ATOM 5 O5' A B 52 50.278 -35.703 -4.333 1.00 53.51 O
ATOM 6 C5' A B 52 50.477 -35.477 -2.939 1.00 53.14 C
ATOM 7 C4' A B 52 49.523 -34.430 -2.398 1.00 52.59 C
ATOM 8 O4' A B 52 49.697 -33.139 -3.086 1.00 53.01 O
ATOM 9 C3' A B 52 48.051 -34.789 -2.556 1.00 52.55 C
ATOM 10 O3' A B 52 47.407 -34.363 -1.372 1.00 52.86 O
ATOM 11 C2' A B 52 47.659 -33.960 -3.800 1.00 51.04 C
ATOM 12 O2' A B 52 46.277 -33.702 -3.882 1.00 49.74 O
ATOM 13 C1' A B 52 48.441 -32.685 -3.546 1.00 51.42 C
ATOM 14 N9 A B 52 48.603 -31.771 -4.690 1.00 52.44 N
ATOM 15 C8 A B 52 48.291 -31.984 -6.004 1.00 51.60 C
ATOM 16 N7 A B 52 48.556 -30.976 -6.796 1.00 52.20 N
ATOM 17 C5 A B 52 49.079 -30.031 -5.939 1.00 52.18 C
ATOM 18 C6 A B 52 49.539 -28.714 -6.153 1.00 52.40 C
ATOM 19 N6 A B 52 49.553 -28.146 -7.365 1.00 52.74 N
ATOM 20 N1 A B 52 49.996 -28.024 -5.080 1.00 52.02 N
ATOM 21 C2 A B 52 49.972 -28.599 -3.872 1.00 51.84 C
ATOM 22 N3 A B 52 49.562 -29.831 -3.560 1.00 52.02 N
ATOM 23 C4 A B 52 49.126 -30.498 -4.645 1.00 51.42 C
ATOM 24 P A B 53 46.046 -34.988 -0.827 1.00 54.37 P
ATOM 25 OP1 A B 53 46.459 -35.883 0.273 1.00 53.24 O
ATOM 26 OP2 A B 53 45.294 -35.535 -1.993 1.00 54.85 O
ATOM 27 O5' A B 53 45.262 -33.734 -0.212 1.00 53.21 O
TER
ATOM 2 P C A 48 53.710 -19.972 -3.321 1.00 59.72 P
ATOM 3 OP1 C A 48 54.766 -19.768 -2.301 1.00 59.45 O
ATOM 4 OP2 C A 48 53.938 -19.525 -4.714 1.00 59.53 O
ATOM 5 O5' C A 48 53.396 -21.527 -3.436 1.00 58.81 O
ATOM 6 C5' C A 48 52.990 -22.364 -2.362 1.00 60.16 C
ATOM 7 C4' C A 48 52.396 -23.615 -2.989 1.00 58.93 C
ATOM 8 O4' C A 48 51.204 -23.276 -3.744 1.00 59.11 O
ATOM 9 C3' C A 48 53.252 -24.282 -4.052 1.00 59.74 C
ATOM 10 O3' C A 48 54.214 -25.086 -3.405 1.00 61.82 O
ATOM 11 C2' C A 48 52.208 -25.148 -4.736 1.00 59.35 C
ATOM 12 O2' C A 48 51.817 -26.190 -3.869 1.00 58.11 O
ATOM 13 C1' C A 48 51.040 -24.170 -4.839 1.00 58.46 C
ATOM 14 N1 C A 48 50.817 -23.428 -6.167 1.00 56.95 N
ATOM 15 C2 C A 48 50.127 -24.050 -7.229 1.00 56.74 C
ATOM 16 O2 C A 48 49.704 -25.209 -7.097 1.00 57.74 O
ATOM 17 N3 C A 48 49.924 -23.372 -8.389 1.00 55.91 N
ATOM 18 C4 C A 48 50.358 -22.111 -8.517 1.00 57.81 C
ATOM 19 N4 C A 48 50.137 -21.471 -9.670 1.00 57.33 N
ATOM 20 C5 C A 48 51.055 -21.452 -7.456 1.00 57.85 C
ATOM 21 C6 C A 48 51.254 -22.142 -6.320 1.00 57.40 C
ATOM 22 P U A 49 55.781 -24.851 -3.583 1.00 61.57 P
ATOM 23 OP1 U A 49 56.391 -25.778 -2.610 1.00 63.21 O
ATOM 24 OP2 U A 49 56.095 -23.396 -3.531 1.00 62.15 O
ATOM 25 O5' U A 49 56.063 -25.395 -5.064 1.00 62.85 O
TER
ATOM 1 O3' A B 51 52.644 -35.415 -5.022 1.00 58.98 O
ATOM 2 P A B 52 51.411 -36.415 -5.189 1.00 57.32 P
ATOM 3 OP1 A B 52 51.776 -37.696 -4.505 1.00 59.45 O
ATOM 4 OP2 A B 52 51.017 -36.478 -6.608 1.00 57.81 O
ATOM 5 O5' A B 52 50.278 -35.703 -4.333 1.00 53.51 O
ATOM 6 C5' A B 52 50.477 -35.477 -2.939 1.00 53.14 C
ATOM 7 C4' A B 52 49.523 -34.430 -2.398 1.00 52.59 C
ATOM 8 O4' A B 52 49.697 -33.139 -3.086 1.00 53.01 O
ATOM 9 C3' A B 52 48.051 -34.789 -2.556 1.00 52.55 C
ATOM 10 O3' A B 52 47.407 -34.363 -1.372 1.00 52.86 O
ATOM 11 C2' A B 52 47.659 -33.960 -3.800 1.00 51.04 C
ATOM 12 O2' A B 52 46.277 -33.702 -3.882 1.00 49.74 O
ATOM 13 C1' A B 52 48.441 -32.685 -3.546 1.00 51.42 C
ATOM 14 N9 A B 52 48.603 -31.771 -4.690 1.00 52.44 N
ATOM 15 C8 A B 52 48.291 -31.984 -6.004 1.00 51.60 C
ATOM 16 N7 A B 52 48.556 -30.976 -6.796 1.00 52.20 N
ATOM 17 C5 A B 52 49.079 -30.031 -5.939 1.00 52.18 C
ATOM 18 C6 A B 52 49.539 -28.714 -6.153 1.00 52.40 C
ATOM 19 N6 A B 52 49.553 -28.146 -7.365 1.00 52.74 N
ATOM 20 N1 A B 52 49.996 -28.024 -5.080 1.00 52.02 N
ATOM 21 C2 A B 52 49.972 -28.599 -3.872 1.00 51.84 C
ATOM 22 N3 A B 52 49.562 -29.831 -3.560 1.00 52.02 N
ATOM 23 C4 A B 52 49.126 -30.498 -4.645 1.00 51.42 C
ATOM 24 P A B 53 46.046 -34.988 -0.827 1.00 54.37 P
ATOM 25 OP1 A B 53 46.459 -35.883 0.273 1.00 53.24 O
ATOM 26 OP2 A B 53 45.294 -35.535 -1.993 1.00 54.85 O
ATOM 27 O5' A B 53 45.262 -33.734 -0.212 1.00 53.21 O
TER
Atoms:
C2: (50.127,-24.050,-7.229)
OP1: (54.766,-19.768,-2.301)
OP2: (53.938,-19.525,-4.714)
C4: (50.358,-22.111,-8.517)
O5': (53.396,-21.527,-3.436)
C3': (53.252,-24.282,-4.052)
C1': (51.040,-24.170,-4.839)
O4': (51.204,-23.276,-3.744)
C5': (52.990,-22.364,-2.362)
P: (53.710,-19.972,-3.321)
O2: (49.704,-25.209,-7.097)
C4': (52.396,-23.615,-2.989)
C2': (52.208,-25.148,-4.736)
O2': (51.817,-26.190,-3.869)
N1: (50.817,-23.428,-6.167)
N3: (49.924,-23.372,-8.389)
N4: (50.137,-21.471,-9.670)
C6: (51.254,-22.142,-6.320)
C5: (51.055,-21.452,-7.456)
O3': (54.214,-25.086,-3.405)
OP1: (54.766,-19.768,-2.301)
OP2: (53.938,-19.525,-4.714)
C4: (50.358,-22.111,-8.517)
O5': (53.396,-21.527,-3.436)
C3': (53.252,-24.282,-4.052)
C1': (51.040,-24.170,-4.839)
O4': (51.204,-23.276,-3.744)
C5': (52.990,-22.364,-2.362)
P: (53.710,-19.972,-3.321)
O2: (49.704,-25.209,-7.097)
C4': (52.396,-23.615,-2.989)
C2': (52.208,-25.148,-4.736)
O2': (51.817,-26.190,-3.869)
N1: (50.817,-23.428,-6.167)
N3: (49.924,-23.372,-8.389)
N4: (50.137,-21.471,-9.670)
C6: (51.254,-22.142,-6.320)
C5: (51.055,-21.452,-7.456)
O3': (54.214,-25.086,-3.405)
OP1: (51.776,-37.696,-4.505)
OP2: (51.017,-36.478,-6.608)
C3': (48.051,-34.789,-2.556)
C1': (48.441,-32.685,-3.546)
C5': (50.477,-35.477,-2.939)
O4': (49.697,-33.139,-3.086)
C8: (48.291,-31.984,-6.004)
O2': (46.277,-33.702,-3.882)
C6: (49.539,-28.714,-6.153)
C5: (49.079,-30.031,-5.939)
C4: (49.126,-30.498,-4.645)
P: (51.411,-36.415,-5.189)
C4': (49.523,-34.430,-2.398)
C2': (47.659,-33.960,-3.800)
C2: (49.972,-28.599,-3.872)
N1: (49.996,-28.024,-5.080)
N3: (49.562,-29.831,-3.560)
N6: (49.553,-28.146,-7.365)
N7: (48.556,-30.976,-6.796)
N9: (48.603,-31.771,-4.690)
O5': (50.278,-35.703,-4.333)
O3': (47.407,-34.363,-1.372)
OP2: (51.017,-36.478,-6.608)
C3': (48.051,-34.789,-2.556)
C1': (48.441,-32.685,-3.546)
C5': (50.477,-35.477,-2.939)
O4': (49.697,-33.139,-3.086)
C8: (48.291,-31.984,-6.004)
O2': (46.277,-33.702,-3.882)
C6: (49.539,-28.714,-6.153)
C5: (49.079,-30.031,-5.939)
C4: (49.126,-30.498,-4.645)
P: (51.411,-36.415,-5.189)
C4': (49.523,-34.430,-2.398)
C2': (47.659,-33.960,-3.800)
C2: (49.972,-28.599,-3.872)
N1: (49.996,-28.024,-5.080)
N3: (49.562,-29.831,-3.560)
N6: (49.553,-28.146,-7.365)
N7: (48.556,-30.976,-6.796)
N9: (48.603,-31.771,-4.690)
O5': (50.278,-35.703,-4.333)
O3': (47.407,-34.363,-1.372)
Image (generated by PyMOL):