Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1683:A1352
Extra
PDB:
ATOM 1 O3' U A1682 60.029 165.359 86.858 1.00 33.23 O
ATOM 2 P C A1683 58.933 164.266 86.519 1.00 31.59 P
ATOM 3 OP1 C A1683 59.225 163.116 87.397 1.00 32.59 O
ATOM 4 OP2 C A1683 58.932 164.111 85.054 1.00 32.34 O
ATOM 5 O5' C A1683 57.569 164.942 86.943 1.00 31.40 O
ATOM 6 C5' C A1683 57.423 165.461 88.246 1.00 31.92 C
ATOM 7 C4' C A1683 56.380 166.535 88.260 1.00 34.23 C
ATOM 8 O4' C A1683 55.087 165.906 88.100 1.00 34.72 O
ATOM 9 C3' C A1683 56.259 167.231 89.597 1.00 35.80 C
ATOM 10 O3' C A1683 57.218 168.249 89.736 1.00 35.86 O
ATOM 11 C2' C A1683 54.834 167.744 89.573 1.00 35.82 C
ATOM 12 O2' C A1683 54.686 168.895 88.776 1.00 38.61 O
ATOM 13 C1' C A1683 54.134 166.554 88.927 1.00 34.43 C
ATOM 14 N1 C A1683 53.622 165.601 89.931 1.00 33.04 N
ATOM 15 C2 C A1683 52.321 165.759 90.321 1.00 32.42 C
ATOM 16 O2 C A1683 51.662 166.655 89.783 1.00 33.70 O
ATOM 17 N3 C A1683 51.792 164.946 91.266 1.00 32.53 N
ATOM 18 C4 C A1683 52.532 163.987 91.811 1.00 33.15 C
ATOM 19 N4 C A1683 51.955 163.231 92.741 1.00 34.02 N
ATOM 20 C5 C A1683 53.890 163.775 91.422 1.00 32.72 C
ATOM 21 C6 C A1683 54.392 164.602 90.479 1.00 33.18 C
ATOM 22 P G A1684 57.463 168.886 91.175 1.00 37.46 P
ATOM 23 OP1 G A1684 58.595 169.798 90.966 1.00 38.11 O
ATOM 24 OP2 G A1684 57.568 167.810 92.203 1.00 34.07 O
ATOM 25 O5' G A1684 56.130 169.724 91.405 1.00 36.23 O
TER
ATOM 1 O3' A B1351 47.782 177.705 86.491 1.00 46.63 O
ATOM 2 P A B1352 47.416 177.030 87.886 1.00 51.68 P
ATOM 3 OP1 A B1352 46.799 175.713 87.562 1.00 51.85 O
ATOM 4 OP2 A B1352 46.642 178.022 88.687 1.00 49.93 O
ATOM 5 O5' A B1352 48.838 176.865 88.578 1.00 48.02 O
ATOM 6 C5' A B1352 49.465 177.999 89.214 1.00 46.86 C
ATOM 7 C4' A B1352 50.930 177.735 89.424 1.00 47.58 C
ATOM 8 O4' A B1352 51.108 176.708 90.424 1.00 46.51 O
ATOM 9 C3' A B1352 51.622 177.211 88.189 1.00 46.44 C
ATOM 10 O3' A B1352 52.041 178.292 87.378 1.00 46.91 O
ATOM 11 C2' A B1352 52.775 176.404 88.759 1.00 46.21 C
ATOM 12 O2' A B1352 53.904 177.174 89.082 1.00 46.90 O
ATOM 13 C1' A B1352 52.156 175.851 90.038 1.00 46.28 C
ATOM 14 N9 A B1352 51.582 174.536 89.839 1.00 46.71 N
ATOM 15 C8 A B1352 50.253 174.182 89.893 1.00 47.90 C
ATOM 16 N7 A B1352 50.042 172.900 89.724 1.00 48.17 N
ATOM 17 C5 A B1352 51.316 172.381 89.536 1.00 47.09 C
ATOM 18 C6 A B1352 51.765 171.092 89.322 1.00 46.18 C
ATOM 19 N6 A B1352 50.957 170.037 89.289 1.00 46.53 N
ATOM 20 N1 A B1352 53.087 170.910 89.151 1.00 45.78 N
ATOM 21 C2 A B1352 53.898 171.968 89.208 1.00 45.64 C
ATOM 22 N3 A B1352 53.597 173.240 89.420 1.00 46.00 N
ATOM 23 C4 A B1352 52.271 173.381 89.582 1.00 46.83 C
ATOM 24 P C B1353 51.646 178.308 85.833 1.00 47.20 P
ATOM 25 OP1 C B1353 51.628 179.722 85.382 1.00 48.20 O
ATOM 26 OP2 C B1353 50.410 177.484 85.716 1.00 47.73 O
ATOM 27 O5' C B1353 52.876 177.569 85.149 1.00 46.01 O
TER
ATOM 2 P C A1683 58.933 164.266 86.519 1.00 31.59 P
ATOM 3 OP1 C A1683 59.225 163.116 87.397 1.00 32.59 O
ATOM 4 OP2 C A1683 58.932 164.111 85.054 1.00 32.34 O
ATOM 5 O5' C A1683 57.569 164.942 86.943 1.00 31.40 O
ATOM 6 C5' C A1683 57.423 165.461 88.246 1.00 31.92 C
ATOM 7 C4' C A1683 56.380 166.535 88.260 1.00 34.23 C
ATOM 8 O4' C A1683 55.087 165.906 88.100 1.00 34.72 O
ATOM 9 C3' C A1683 56.259 167.231 89.597 1.00 35.80 C
ATOM 10 O3' C A1683 57.218 168.249 89.736 1.00 35.86 O
ATOM 11 C2' C A1683 54.834 167.744 89.573 1.00 35.82 C
ATOM 12 O2' C A1683 54.686 168.895 88.776 1.00 38.61 O
ATOM 13 C1' C A1683 54.134 166.554 88.927 1.00 34.43 C
ATOM 14 N1 C A1683 53.622 165.601 89.931 1.00 33.04 N
ATOM 15 C2 C A1683 52.321 165.759 90.321 1.00 32.42 C
ATOM 16 O2 C A1683 51.662 166.655 89.783 1.00 33.70 O
ATOM 17 N3 C A1683 51.792 164.946 91.266 1.00 32.53 N
ATOM 18 C4 C A1683 52.532 163.987 91.811 1.00 33.15 C
ATOM 19 N4 C A1683 51.955 163.231 92.741 1.00 34.02 N
ATOM 20 C5 C A1683 53.890 163.775 91.422 1.00 32.72 C
ATOM 21 C6 C A1683 54.392 164.602 90.479 1.00 33.18 C
ATOM 22 P G A1684 57.463 168.886 91.175 1.00 37.46 P
ATOM 23 OP1 G A1684 58.595 169.798 90.966 1.00 38.11 O
ATOM 24 OP2 G A1684 57.568 167.810 92.203 1.00 34.07 O
ATOM 25 O5' G A1684 56.130 169.724 91.405 1.00 36.23 O
TER
ATOM 1 O3' A B1351 47.782 177.705 86.491 1.00 46.63 O
ATOM 2 P A B1352 47.416 177.030 87.886 1.00 51.68 P
ATOM 3 OP1 A B1352 46.799 175.713 87.562 1.00 51.85 O
ATOM 4 OP2 A B1352 46.642 178.022 88.687 1.00 49.93 O
ATOM 5 O5' A B1352 48.838 176.865 88.578 1.00 48.02 O
ATOM 6 C5' A B1352 49.465 177.999 89.214 1.00 46.86 C
ATOM 7 C4' A B1352 50.930 177.735 89.424 1.00 47.58 C
ATOM 8 O4' A B1352 51.108 176.708 90.424 1.00 46.51 O
ATOM 9 C3' A B1352 51.622 177.211 88.189 1.00 46.44 C
ATOM 10 O3' A B1352 52.041 178.292 87.378 1.00 46.91 O
ATOM 11 C2' A B1352 52.775 176.404 88.759 1.00 46.21 C
ATOM 12 O2' A B1352 53.904 177.174 89.082 1.00 46.90 O
ATOM 13 C1' A B1352 52.156 175.851 90.038 1.00 46.28 C
ATOM 14 N9 A B1352 51.582 174.536 89.839 1.00 46.71 N
ATOM 15 C8 A B1352 50.253 174.182 89.893 1.00 47.90 C
ATOM 16 N7 A B1352 50.042 172.900 89.724 1.00 48.17 N
ATOM 17 C5 A B1352 51.316 172.381 89.536 1.00 47.09 C
ATOM 18 C6 A B1352 51.765 171.092 89.322 1.00 46.18 C
ATOM 19 N6 A B1352 50.957 170.037 89.289 1.00 46.53 N
ATOM 20 N1 A B1352 53.087 170.910 89.151 1.00 45.78 N
ATOM 21 C2 A B1352 53.898 171.968 89.208 1.00 45.64 C
ATOM 22 N3 A B1352 53.597 173.240 89.420 1.00 46.00 N
ATOM 23 C4 A B1352 52.271 173.381 89.582 1.00 46.83 C
ATOM 24 P C B1353 51.646 178.308 85.833 1.00 47.20 P
ATOM 25 OP1 C B1353 51.628 179.722 85.382 1.00 48.20 O
ATOM 26 OP2 C B1353 50.410 177.484 85.716 1.00 47.73 O
ATOM 27 O5' C B1353 52.876 177.569 85.149 1.00 46.01 O
TER
Atoms:
C2: (52.321,165.759,90.321)
OP1: (59.225,163.116,87.397)
OP2: (58.932,164.111,85.054)
C4: (52.532,163.987,91.811)
O5': (57.569,164.942,86.943)
C3': (56.259,167.231,89.597)
C1': (54.134,166.554,88.927)
O4': (55.087,165.906,88.100)
C5': (57.423,165.461,88.246)
P: (58.933,164.266,86.519)
O2: (51.662,166.655,89.783)
C4': (56.380,166.535,88.260)
C2': (54.834,167.744,89.573)
O2': (54.686,168.895,88.776)
N1: (53.622,165.601,89.931)
N3: (51.792,164.946,91.266)
N4: (51.955,163.231,92.741)
C6: (54.392,164.602,90.479)
C5: (53.890,163.775,91.422)
O3': (57.218,168.249,89.736)
OP1: (59.225,163.116,87.397)
OP2: (58.932,164.111,85.054)
C4: (52.532,163.987,91.811)
O5': (57.569,164.942,86.943)
C3': (56.259,167.231,89.597)
C1': (54.134,166.554,88.927)
O4': (55.087,165.906,88.100)
C5': (57.423,165.461,88.246)
P: (58.933,164.266,86.519)
O2: (51.662,166.655,89.783)
C4': (56.380,166.535,88.260)
C2': (54.834,167.744,89.573)
O2': (54.686,168.895,88.776)
N1: (53.622,165.601,89.931)
N3: (51.792,164.946,91.266)
N4: (51.955,163.231,92.741)
C6: (54.392,164.602,90.479)
C5: (53.890,163.775,91.422)
O3': (57.218,168.249,89.736)
OP1: (46.799,175.713,87.562)
OP2: (46.642,178.022,88.687)
C3': (51.622,177.211,88.189)
C1': (52.156,175.851,90.038)
C5': (49.465,177.999,89.214)
O4': (51.108,176.708,90.424)
C8: (50.253,174.182,89.893)
O2': (53.904,177.174,89.082)
C6: (51.765,171.092,89.322)
C5: (51.316,172.381,89.536)
C4: (52.271,173.381,89.582)
P: (47.416,177.030,87.886)
C4': (50.930,177.735,89.424)
C2': (52.775,176.404,88.759)
C2: (53.898,171.968,89.208)
N1: (53.087,170.910,89.151)
N3: (53.597,173.240,89.420)
N6: (50.957,170.037,89.289)
N7: (50.042,172.900,89.724)
N9: (51.582,174.536,89.839)
O5': (48.838,176.865,88.578)
O3': (52.041,178.292,87.378)
OP2: (46.642,178.022,88.687)
C3': (51.622,177.211,88.189)
C1': (52.156,175.851,90.038)
C5': (49.465,177.999,89.214)
O4': (51.108,176.708,90.424)
C8: (50.253,174.182,89.893)
O2': (53.904,177.174,89.082)
C6: (51.765,171.092,89.322)
C5: (51.316,172.381,89.536)
C4: (52.271,173.381,89.582)
P: (47.416,177.030,87.886)
C4': (50.930,177.735,89.424)
C2': (52.775,176.404,88.759)
C2: (53.898,171.968,89.208)
N1: (53.087,170.910,89.151)
N3: (53.597,173.240,89.420)
N6: (50.957,170.037,89.289)
N7: (50.042,172.900,89.724)
N9: (51.582,174.536,89.839)
O5': (48.838,176.865,88.578)
O3': (52.041,178.292,87.378)
Image (generated by PyMOL):