Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:01042:01083
Extra
PDB:
ATOM 1 O3' A A1041 38.000 95.708 103.156 1.00 39.61 O
ATOM 2 P C A1042 38.701 94.660 104.163 1.00 40.60 P
ATOM 3 OP1 C A1042 40.180 94.699 104.001 1.00 37.71 O
ATOM 4 OP2 C A1042 37.989 93.369 103.985 1.00 39.87 O
ATOM 5 O5' C A1042 38.355 95.202 105.620 1.00 40.08 O
ATOM 6 C5' C A1042 38.805 94.473 106.789 1.00 41.01 C
ATOM 7 C4' C A1042 37.852 94.665 107.946 1.00 38.48 C
ATOM 8 O4' C A1042 37.883 96.043 108.390 1.00 39.79 O
ATOM 9 C3' C A1042 36.385 94.425 107.658 1.00 39.09 C
ATOM 10 O3' C A1042 36.067 93.048 107.665 1.00 42.41 O
ATOM 11 C2' C A1042 35.728 95.177 108.800 1.00 39.17 C
ATOM 12 O2' C A1042 35.863 94.509 110.036 1.00 39.88 O
ATOM 13 C1' C A1042 36.599 96.425 108.855 1.00 38.79 C
ATOM 14 N1 C A1042 36.081 97.506 107.994 1.00 39.65 N
ATOM 15 C2 C A1042 34.928 98.192 108.400 1.00 39.61 C
ATOM 16 O2 C A1042 34.359 97.850 109.450 1.00 39.44 O
ATOM 17 N3 C A1042 34.463 99.204 107.642 1.00 38.83 N
ATOM 18 C4 C A1042 35.095 99.541 106.516 1.00 38.86 C
ATOM 19 N4 C A1042 34.610 100.569 105.816 1.00 37.95 N
ATOM 20 C5 C A1042 36.252 98.847 106.063 1.00 37.05 C
ATOM 21 C6 C A1042 36.708 97.847 106.825 1.00 37.91 C
ATOM 22 P C A1043 34.786 92.533 106.859 1.00 41.70 P
ATOM 23 OP1 C A1043 34.809 91.054 106.906 1.00 42.61 O
ATOM 24 OP2 C A1043 34.728 93.224 105.551 1.00 43.15 O
ATOM 25 O5' C A1043 33.572 93.056 107.735 1.00 40.33 O
TER
ATOM 1 O3' A B1082 36.309 100.230 120.710 1.00 48.83 O
ATOM 2 P A B1083 35.217 99.501 119.781 1.00 50.57 P
ATOM 3 OP1 A B1083 35.666 99.703 118.381 1.00 49.13 O
ATOM 4 OP2 A B1083 33.845 99.925 120.184 1.00 53.01 O
ATOM 5 O5' A B1083 35.353 97.964 120.161 1.00 47.47 O
ATOM 6 C5' A B1083 36.551 97.254 119.876 1.00 42.24 C
ATOM 7 C4' A B1083 36.237 95.840 119.484 1.00 40.22 C
ATOM 8 O4' A B1083 34.958 95.766 118.805 1.00 41.22 O
ATOM 9 C3' A B1083 37.241 95.322 118.486 1.00 40.71 C
ATOM 10 O3' A B1083 38.379 94.839 119.153 1.00 39.28 O
ATOM 11 C2' A B1083 36.449 94.281 117.717 1.00 40.52 C
ATOM 12 O2' A B1083 36.340 93.072 118.426 1.00 42.71 O
ATOM 13 C1' A B1083 35.080 94.961 117.643 1.00 39.94 C
ATOM 14 N9 A B1083 34.918 95.841 116.481 1.00 38.75 N
ATOM 15 C8 A B1083 34.544 97.167 116.487 1.00 36.39 C
ATOM 16 N7 A B1083 34.430 97.689 115.292 1.00 36.26 N
ATOM 17 C5 A B1083 34.761 96.645 114.440 1.00 35.19 C
ATOM 18 C6 A B1083 34.815 96.552 113.048 1.00 34.08 C
ATOM 19 N6 A B1083 34.525 97.561 112.229 1.00 34.64 N
ATOM 20 N1 A B1083 35.180 95.372 112.512 1.00 35.43 N
ATOM 21 C2 A B1083 35.475 94.359 113.330 1.00 36.27 C
ATOM 22 N3 A B1083 35.457 94.319 114.657 1.00 38.14 N
ATOM 23 C4 A B1083 35.081 95.507 115.158 1.00 37.12 C
ATOM 24 P U B1084 39.772 95.603 118.974 1.00 39.25 P
ATOM 25 OP1 U B1084 40.754 94.949 119.882 1.00 37.49 O
ATOM 26 OP2 U B1084 39.508 97.057 119.093 1.00 37.03 O
ATOM 27 O5' U B1084 40.163 95.316 117.458 1.00 39.64 O
TER
ATOM 2 P C A1042 38.701 94.660 104.163 1.00 40.60 P
ATOM 3 OP1 C A1042 40.180 94.699 104.001 1.00 37.71 O
ATOM 4 OP2 C A1042 37.989 93.369 103.985 1.00 39.87 O
ATOM 5 O5' C A1042 38.355 95.202 105.620 1.00 40.08 O
ATOM 6 C5' C A1042 38.805 94.473 106.789 1.00 41.01 C
ATOM 7 C4' C A1042 37.852 94.665 107.946 1.00 38.48 C
ATOM 8 O4' C A1042 37.883 96.043 108.390 1.00 39.79 O
ATOM 9 C3' C A1042 36.385 94.425 107.658 1.00 39.09 C
ATOM 10 O3' C A1042 36.067 93.048 107.665 1.00 42.41 O
ATOM 11 C2' C A1042 35.728 95.177 108.800 1.00 39.17 C
ATOM 12 O2' C A1042 35.863 94.509 110.036 1.00 39.88 O
ATOM 13 C1' C A1042 36.599 96.425 108.855 1.00 38.79 C
ATOM 14 N1 C A1042 36.081 97.506 107.994 1.00 39.65 N
ATOM 15 C2 C A1042 34.928 98.192 108.400 1.00 39.61 C
ATOM 16 O2 C A1042 34.359 97.850 109.450 1.00 39.44 O
ATOM 17 N3 C A1042 34.463 99.204 107.642 1.00 38.83 N
ATOM 18 C4 C A1042 35.095 99.541 106.516 1.00 38.86 C
ATOM 19 N4 C A1042 34.610 100.569 105.816 1.00 37.95 N
ATOM 20 C5 C A1042 36.252 98.847 106.063 1.00 37.05 C
ATOM 21 C6 C A1042 36.708 97.847 106.825 1.00 37.91 C
ATOM 22 P C A1043 34.786 92.533 106.859 1.00 41.70 P
ATOM 23 OP1 C A1043 34.809 91.054 106.906 1.00 42.61 O
ATOM 24 OP2 C A1043 34.728 93.224 105.551 1.00 43.15 O
ATOM 25 O5' C A1043 33.572 93.056 107.735 1.00 40.33 O
TER
ATOM 1 O3' A B1082 36.309 100.230 120.710 1.00 48.83 O
ATOM 2 P A B1083 35.217 99.501 119.781 1.00 50.57 P
ATOM 3 OP1 A B1083 35.666 99.703 118.381 1.00 49.13 O
ATOM 4 OP2 A B1083 33.845 99.925 120.184 1.00 53.01 O
ATOM 5 O5' A B1083 35.353 97.964 120.161 1.00 47.47 O
ATOM 6 C5' A B1083 36.551 97.254 119.876 1.00 42.24 C
ATOM 7 C4' A B1083 36.237 95.840 119.484 1.00 40.22 C
ATOM 8 O4' A B1083 34.958 95.766 118.805 1.00 41.22 O
ATOM 9 C3' A B1083 37.241 95.322 118.486 1.00 40.71 C
ATOM 10 O3' A B1083 38.379 94.839 119.153 1.00 39.28 O
ATOM 11 C2' A B1083 36.449 94.281 117.717 1.00 40.52 C
ATOM 12 O2' A B1083 36.340 93.072 118.426 1.00 42.71 O
ATOM 13 C1' A B1083 35.080 94.961 117.643 1.00 39.94 C
ATOM 14 N9 A B1083 34.918 95.841 116.481 1.00 38.75 N
ATOM 15 C8 A B1083 34.544 97.167 116.487 1.00 36.39 C
ATOM 16 N7 A B1083 34.430 97.689 115.292 1.00 36.26 N
ATOM 17 C5 A B1083 34.761 96.645 114.440 1.00 35.19 C
ATOM 18 C6 A B1083 34.815 96.552 113.048 1.00 34.08 C
ATOM 19 N6 A B1083 34.525 97.561 112.229 1.00 34.64 N
ATOM 20 N1 A B1083 35.180 95.372 112.512 1.00 35.43 N
ATOM 21 C2 A B1083 35.475 94.359 113.330 1.00 36.27 C
ATOM 22 N3 A B1083 35.457 94.319 114.657 1.00 38.14 N
ATOM 23 C4 A B1083 35.081 95.507 115.158 1.00 37.12 C
ATOM 24 P U B1084 39.772 95.603 118.974 1.00 39.25 P
ATOM 25 OP1 U B1084 40.754 94.949 119.882 1.00 37.49 O
ATOM 26 OP2 U B1084 39.508 97.057 119.093 1.00 37.03 O
ATOM 27 O5' U B1084 40.163 95.316 117.458 1.00 39.64 O
TER
Atoms:
C2: (34.928,98.192,108.400)
OP1: (40.180,94.699,104.001)
OP2: (37.989,93.369,103.985)
C4: (35.095,99.541,106.516)
O5': (38.355,95.202,105.620)
C3': (36.385,94.425,107.658)
C1': (36.599,96.425,108.855)
O4': (37.883,96.043,108.390)
C5': (38.805,94.473,106.789)
P: (38.701,94.660,104.163)
O2: (34.359,97.850,109.450)
C4': (37.852,94.665,107.946)
C2': (35.728,95.177,108.800)
O2': (35.863,94.509,110.036)
N1: (36.081,97.506,107.994)
N3: (34.463,99.204,107.642)
N4: (34.610,100.569,105.816)
C6: (36.708,97.847,106.825)
C5: (36.252,98.847,106.063)
O3': (36.067,93.048,107.665)
OP1: (40.180,94.699,104.001)
OP2: (37.989,93.369,103.985)
C4: (35.095,99.541,106.516)
O5': (38.355,95.202,105.620)
C3': (36.385,94.425,107.658)
C1': (36.599,96.425,108.855)
O4': (37.883,96.043,108.390)
C5': (38.805,94.473,106.789)
P: (38.701,94.660,104.163)
O2: (34.359,97.850,109.450)
C4': (37.852,94.665,107.946)
C2': (35.728,95.177,108.800)
O2': (35.863,94.509,110.036)
N1: (36.081,97.506,107.994)
N3: (34.463,99.204,107.642)
N4: (34.610,100.569,105.816)
C6: (36.708,97.847,106.825)
C5: (36.252,98.847,106.063)
O3': (36.067,93.048,107.665)
OP1: (35.666,99.703,118.381)
OP2: (33.845,99.925,120.184)
C3': (37.241,95.322,118.486)
C1': (35.080,94.961,117.643)
C5': (36.551,97.254,119.876)
O4': (34.958,95.766,118.805)
C8: (34.544,97.167,116.487)
O2': (36.340,93.072,118.426)
C6: (34.815,96.552,113.048)
C5: (34.761,96.645,114.440)
C4: (35.081,95.507,115.158)
P: (35.217,99.501,119.781)
C4': (36.237,95.840,119.484)
C2': (36.449,94.281,117.717)
C2: (35.475,94.359,113.330)
N1: (35.180,95.372,112.512)
N3: (35.457,94.319,114.657)
N6: (34.525,97.561,112.229)
N7: (34.430,97.689,115.292)
N9: (34.918,95.841,116.481)
O5': (35.353,97.964,120.161)
O3': (38.379,94.839,119.153)
OP2: (33.845,99.925,120.184)
C3': (37.241,95.322,118.486)
C1': (35.080,94.961,117.643)
C5': (36.551,97.254,119.876)
O4': (34.958,95.766,118.805)
C8: (34.544,97.167,116.487)
O2': (36.340,93.072,118.426)
C6: (34.815,96.552,113.048)
C5: (34.761,96.645,114.440)
C4: (35.081,95.507,115.158)
P: (35.217,99.501,119.781)
C4': (36.237,95.840,119.484)
C2': (36.449,94.281,117.717)
C2: (35.475,94.359,113.330)
N1: (35.180,95.372,112.512)
N3: (35.457,94.319,114.657)
N6: (34.525,97.561,112.229)
N7: (34.430,97.689,115.292)
N9: (34.918,95.841,116.481)
O5': (35.353,97.964,120.161)
O3': (38.379,94.839,119.153)
Image (generated by PyMOL):