Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12584:11246
Extra
PDB:
ATOM 1 O3' G A2583 10.007 4.788 35.527 1.00 47.37 O
ATOM 2 P C A2584 9.503 4.815 34.008 1.00 47.50 P
ATOM 3 OP1 C A2584 8.580 5.950 33.917 1.00 47.79 O
ATOM 4 OP2 C A2584 9.034 3.448 33.652 1.00 47.55 O
ATOM 5 O5' C A2584 10.807 5.150 33.181 1.00 47.48 O
ATOM 6 C5' C A2584 11.253 6.481 33.016 1.00 47.56 C
ATOM 7 C4' C A2584 12.460 6.498 32.154 1.00 47.55 C
ATOM 8 O4' C A2584 13.416 5.556 32.678 1.00 47.19 O
ATOM 9 C3' C A2584 12.262 6.028 30.721 1.00 47.87 C
ATOM 10 O3' C A2584 11.760 7.038 29.908 1.00 48.25 O
ATOM 11 C2' C A2584 13.666 5.651 30.327 1.00 47.70 C
ATOM 12 O2' C A2584 14.421 6.831 30.065 1.00 47.75 O
ATOM 13 C1' C A2584 14.165 5.000 31.615 1.00 47.26 C
ATOM 14 N1 C A2584 13.918 3.555 31.580 1.00 47.19 N
ATOM 15 C2 C A2584 14.787 2.760 30.823 1.00 47.17 C
ATOM 16 O2 C A2584 15.769 3.265 30.268 1.00 47.19 O
ATOM 17 N3 C A2584 14.519 1.434 30.741 1.00 47.15 N
ATOM 18 C4 C A2584 13.447 0.921 31.351 1.00 47.14 C
ATOM 19 N4 C A2584 13.234 -0.370 31.205 1.00 47.14 N
ATOM 20 C5 C A2584 12.555 1.704 32.121 1.00 47.16 C
ATOM 21 C6 C A2584 12.811 3.013 32.198 1.00 47.19 C
ATOM 22 P A A2585 10.793 6.717 28.686 1.00 44.49 P
ATOM 23 OP1 A A2585 10.191 8.024 28.322 1.00 44.82 O
ATOM 24 OP2 A A2585 9.922 5.597 29.091 1.00 44.45 O
ATOM 25 O5' A A2585 11.755 6.233 27.533 1.00 44.57 O
TER
ATOM 1 O3' A B1245 24.228 9.155 22.876 1.00 44.04 O
ATOM 2 P A B1246 23.804 10.497 23.669 1.00 44.44 P
ATOM 3 OP1 A B1246 22.856 11.233 22.807 1.00 44.88 O
ATOM 4 OP2 A B1246 25.071 11.179 24.084 1.00 44.26 O
ATOM 5 O5' A B1246 23.033 9.946 24.946 1.00 44.14 O
ATOM 6 C5' A B1246 23.700 9.737 26.169 1.00 43.71 C
ATOM 7 C4' A B1246 22.954 10.340 27.319 1.00 43.58 C
ATOM 8 O4' A B1246 21.679 9.688 27.504 1.00 43.62 O
ATOM 9 C3' A B1246 23.603 10.175 28.654 1.00 43.16 C
ATOM 10 O3' A B1246 24.714 11.043 28.821 1.00 43.08 O
ATOM 11 C2' A B1246 22.432 10.414 29.633 1.00 43.09 C
ATOM 12 O2' A B1246 22.195 11.794 29.838 1.00 43.24 O
ATOM 13 C1' A B1246 21.258 9.860 28.847 1.00 43.37 C
ATOM 14 N9 A B1246 20.781 8.576 29.362 1.00 43.17 N
ATOM 15 C8 A B1246 21.509 7.506 29.767 1.00 42.87 C
ATOM 16 N7 A B1246 20.808 6.466 30.133 1.00 42.78 N
ATOM 17 C5 A B1246 19.492 6.899 29.968 1.00 43.04 C
ATOM 18 C6 A B1246 18.245 6.255 30.166 1.00 43.10 C
ATOM 19 N6 A B1246 18.107 4.998 30.615 1.00 42.91 N
ATOM 20 N1 A B1246 17.150 6.960 29.881 1.00 43.40 N
ATOM 21 C2 A B1246 17.275 8.210 29.456 1.00 43.60 C
ATOM 22 N3 A B1246 18.331 8.936 29.216 1.00 43.58 N
ATOM 23 C4 A B1246 19.451 8.206 29.487 1.00 43.28 C
ATOM 24 P A B1247 26.109 10.511 29.423 1.00 49.15 P
ATOM 25 OP1 A B1247 27.153 10.884 28.468 1.00 49.31 O
ATOM 26 OP2 A B1247 25.946 9.080 29.794 1.00 48.93 O
ATOM 27 O5' A B1247 26.219 11.371 30.710 1.00 48.95 O
TER
ATOM 2 P C A2584 9.503 4.815 34.008 1.00 47.50 P
ATOM 3 OP1 C A2584 8.580 5.950 33.917 1.00 47.79 O
ATOM 4 OP2 C A2584 9.034 3.448 33.652 1.00 47.55 O
ATOM 5 O5' C A2584 10.807 5.150 33.181 1.00 47.48 O
ATOM 6 C5' C A2584 11.253 6.481 33.016 1.00 47.56 C
ATOM 7 C4' C A2584 12.460 6.498 32.154 1.00 47.55 C
ATOM 8 O4' C A2584 13.416 5.556 32.678 1.00 47.19 O
ATOM 9 C3' C A2584 12.262 6.028 30.721 1.00 47.87 C
ATOM 10 O3' C A2584 11.760 7.038 29.908 1.00 48.25 O
ATOM 11 C2' C A2584 13.666 5.651 30.327 1.00 47.70 C
ATOM 12 O2' C A2584 14.421 6.831 30.065 1.00 47.75 O
ATOM 13 C1' C A2584 14.165 5.000 31.615 1.00 47.26 C
ATOM 14 N1 C A2584 13.918 3.555 31.580 1.00 47.19 N
ATOM 15 C2 C A2584 14.787 2.760 30.823 1.00 47.17 C
ATOM 16 O2 C A2584 15.769 3.265 30.268 1.00 47.19 O
ATOM 17 N3 C A2584 14.519 1.434 30.741 1.00 47.15 N
ATOM 18 C4 C A2584 13.447 0.921 31.351 1.00 47.14 C
ATOM 19 N4 C A2584 13.234 -0.370 31.205 1.00 47.14 N
ATOM 20 C5 C A2584 12.555 1.704 32.121 1.00 47.16 C
ATOM 21 C6 C A2584 12.811 3.013 32.198 1.00 47.19 C
ATOM 22 P A A2585 10.793 6.717 28.686 1.00 44.49 P
ATOM 23 OP1 A A2585 10.191 8.024 28.322 1.00 44.82 O
ATOM 24 OP2 A A2585 9.922 5.597 29.091 1.00 44.45 O
ATOM 25 O5' A A2585 11.755 6.233 27.533 1.00 44.57 O
TER
ATOM 1 O3' A B1245 24.228 9.155 22.876 1.00 44.04 O
ATOM 2 P A B1246 23.804 10.497 23.669 1.00 44.44 P
ATOM 3 OP1 A B1246 22.856 11.233 22.807 1.00 44.88 O
ATOM 4 OP2 A B1246 25.071 11.179 24.084 1.00 44.26 O
ATOM 5 O5' A B1246 23.033 9.946 24.946 1.00 44.14 O
ATOM 6 C5' A B1246 23.700 9.737 26.169 1.00 43.71 C
ATOM 7 C4' A B1246 22.954 10.340 27.319 1.00 43.58 C
ATOM 8 O4' A B1246 21.679 9.688 27.504 1.00 43.62 O
ATOM 9 C3' A B1246 23.603 10.175 28.654 1.00 43.16 C
ATOM 10 O3' A B1246 24.714 11.043 28.821 1.00 43.08 O
ATOM 11 C2' A B1246 22.432 10.414 29.633 1.00 43.09 C
ATOM 12 O2' A B1246 22.195 11.794 29.838 1.00 43.24 O
ATOM 13 C1' A B1246 21.258 9.860 28.847 1.00 43.37 C
ATOM 14 N9 A B1246 20.781 8.576 29.362 1.00 43.17 N
ATOM 15 C8 A B1246 21.509 7.506 29.767 1.00 42.87 C
ATOM 16 N7 A B1246 20.808 6.466 30.133 1.00 42.78 N
ATOM 17 C5 A B1246 19.492 6.899 29.968 1.00 43.04 C
ATOM 18 C6 A B1246 18.245 6.255 30.166 1.00 43.10 C
ATOM 19 N6 A B1246 18.107 4.998 30.615 1.00 42.91 N
ATOM 20 N1 A B1246 17.150 6.960 29.881 1.00 43.40 N
ATOM 21 C2 A B1246 17.275 8.210 29.456 1.00 43.60 C
ATOM 22 N3 A B1246 18.331 8.936 29.216 1.00 43.58 N
ATOM 23 C4 A B1246 19.451 8.206 29.487 1.00 43.28 C
ATOM 24 P A B1247 26.109 10.511 29.423 1.00 49.15 P
ATOM 25 OP1 A B1247 27.153 10.884 28.468 1.00 49.31 O
ATOM 26 OP2 A B1247 25.946 9.080 29.794 1.00 48.93 O
ATOM 27 O5' A B1247 26.219 11.371 30.710 1.00 48.95 O
TER
Atoms:
C2: (14.787,2.760,30.823)
OP1: (8.580,5.950,33.917)
OP2: (9.034,3.448,33.652)
C4: (13.447,0.921,31.351)
O5': (10.807,5.150,33.181)
C3': (12.262,6.028,30.721)
C1': (14.165,5.000,31.615)
O4': (13.416,5.556,32.678)
C5': (11.253,6.481,33.016)
P: (9.503,4.815,34.008)
O2: (15.769,3.265,30.268)
C4': (12.460,6.498,32.154)
C2': (13.666,5.651,30.327)
O2': (14.421,6.831,30.065)
N1: (13.918,3.555,31.580)
N3: (14.519,1.434,30.741)
N4: (13.234,-0.370,31.205)
C6: (12.811,3.013,32.198)
C5: (12.555,1.704,32.121)
O3': (11.760,7.038,29.908)
OP1: (8.580,5.950,33.917)
OP2: (9.034,3.448,33.652)
C4: (13.447,0.921,31.351)
O5': (10.807,5.150,33.181)
C3': (12.262,6.028,30.721)
C1': (14.165,5.000,31.615)
O4': (13.416,5.556,32.678)
C5': (11.253,6.481,33.016)
P: (9.503,4.815,34.008)
O2: (15.769,3.265,30.268)
C4': (12.460,6.498,32.154)
C2': (13.666,5.651,30.327)
O2': (14.421,6.831,30.065)
N1: (13.918,3.555,31.580)
N3: (14.519,1.434,30.741)
N4: (13.234,-0.370,31.205)
C6: (12.811,3.013,32.198)
C5: (12.555,1.704,32.121)
O3': (11.760,7.038,29.908)
OP1: (22.856,11.233,22.807)
OP2: (25.071,11.179,24.084)
C3': (23.603,10.175,28.654)
C1': (21.258,9.860,28.847)
C5': (23.700,9.737,26.169)
O4': (21.679,9.688,27.504)
C8: (21.509,7.506,29.767)
O2': (22.195,11.794,29.838)
C6: (18.245,6.255,30.166)
C5: (19.492,6.899,29.968)
C4: (19.451,8.206,29.487)
P: (23.804,10.497,23.669)
C4': (22.954,10.340,27.319)
C2': (22.432,10.414,29.633)
C2: (17.275,8.210,29.456)
N1: (17.150,6.960,29.881)
N3: (18.331,8.936,29.216)
N6: (18.107,4.998,30.615)
N7: (20.808,6.466,30.133)
N9: (20.781,8.576,29.362)
O5': (23.033,9.946,24.946)
O3': (24.714,11.043,28.821)
OP2: (25.071,11.179,24.084)
C3': (23.603,10.175,28.654)
C1': (21.258,9.860,28.847)
C5': (23.700,9.737,26.169)
O4': (21.679,9.688,27.504)
C8: (21.509,7.506,29.767)
O2': (22.195,11.794,29.838)
C6: (18.245,6.255,30.166)
C5: (19.492,6.899,29.968)
C4: (19.451,8.206,29.487)
P: (23.804,10.497,23.669)
C4': (22.954,10.340,27.319)
C2': (22.432,10.414,29.633)
C2: (17.275,8.210,29.456)
N1: (17.150,6.960,29.881)
N3: (18.331,8.936,29.216)
N6: (18.107,4.998,30.615)
N7: (20.808,6.466,30.133)
N9: (20.781,8.576,29.362)
O5': (23.033,9.946,24.946)
O3': (24.714,11.043,28.821)
Image (generated by PyMOL):