ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1K9M:A2089:A2080

Extra

PDB:
ATOM 1 O3' U A2088 125.032 114.770 29.631 1.00 76.49 O
ATOM 2 P C A2089 124.606 116.131 28.897 1.00 74.92 P
ATOM 3 OP1 C A2089 124.919 115.933 27.455 1.00 74.52 O
ATOM 4 OP2 C A2089 125.210 117.268 29.636 1.00 75.59 O
ATOM 5 O5' C A2089 123.031 116.171 29.109 1.00 74.04 O
ATOM 6 C5' C A2089 122.135 116.815 28.177 1.00 72.12 C
ATOM 7 C4' C A2089 120.722 116.390 28.495 1.00 71.00 C
ATOM 8 O4' C A2089 120.520 115.013 28.060 1.00 71.30 O
ATOM 9 C3' C A2089 120.438 116.389 29.995 1.00 69.75 C
ATOM 10 O3' C A2089 119.060 116.607 30.227 1.00 67.25 O
ATOM 11 C2' C A2089 120.795 114.964 30.387 1.00 69.86 C
ATOM 12 O2' C A2089 120.195 114.566 31.593 1.00 69.84 O
ATOM 13 C1' C A2089 120.242 114.198 29.185 1.00 71.41 C
ATOM 14 N1 C A2089 120.809 112.852 28.959 1.00 72.89 N
ATOM 15 C2 C A2089 119.983 111.725 29.149 1.00 72.97 C
ATOM 16 O2 C A2089 118.793 111.888 29.468 1.00 72.22 O
ATOM 17 N3 C A2089 120.504 110.489 28.976 1.00 73.49 N
ATOM 18 C4 C A2089 121.782 110.347 28.625 1.00 73.91 C
ATOM 19 N4 C A2089 122.261 109.106 28.486 1.00 73.83 N
ATOM 20 C5 C A2089 122.633 111.469 28.404 1.00 74.24 C
ATOM 21 C6 C A2089 122.113 112.690 28.578 1.00 73.83 C
ATOM 22 P A A2090 118.584 117.950 30.953 1.00 66.04 P
ATOM 23 OP1 A A2090 118.763 119.051 29.970 1.00 66.31 O
ATOM 24 OP2 A A2090 119.279 118.012 32.266 1.00 64.22 O
ATOM 25 O5' A A2090 117.023 117.718 31.198 1.00 66.09 O
TER

ATOM 1 O3' U B2079 113.397 105.512 32.634 1.00 70.99 O
ATOM 2 P G B2080 113.796 104.846 31.235 1.00 73.35 P
ATOM 3 OP1 G B2080 112.764 105.308 30.266 1.00 71.93 O
ATOM 4 OP2 G B2080 113.963 103.369 31.487 1.00 72.23 O
ATOM 5 O5' G B2080 115.228 105.517 30.920 1.00 76.34 O
ATOM 6 C5' G B2080 115.426 106.428 29.788 1.00 79.10 C
ATOM 7 C4' G B2080 116.846 107.022 29.742 1.00 80.92 C
ATOM 8 O4' G B2080 117.040 108.043 30.762 1.00 80.77 O
ATOM 9 C3' G B2080 118.113 106.168 29.832 1.00 82.32 C
ATOM 10 O3' G B2080 118.447 105.450 28.633 1.00 84.13 O
ATOM 11 C2' G B2080 119.186 107.225 30.109 1.00 82.33 C
ATOM 12 O2' G B2080 119.707 107.843 28.940 1.00 83.50 O
ATOM 13 C1' G B2080 118.431 108.247 30.961 1.00 81.97 C
ATOM 14 N9 G B2080 118.768 108.037 32.364 1.00 82.11 N
ATOM 15 C8 G B2080 117.970 107.518 33.356 1.00 82.18 C
ATOM 16 N7 G B2080 118.597 107.368 34.494 1.00 82.19 N
ATOM 17 C5 G B2080 119.882 107.838 34.245 1.00 82.10 C
ATOM 18 C6 G B2080 121.033 107.913 35.098 1.00 82.38 C
ATOM 19 O6 G B2080 121.147 107.577 36.290 1.00 82.26 O
ATOM 20 N1 G B2080 122.129 108.444 34.424 1.00 82.94 N
ATOM 21 C2 G B2080 122.130 108.846 33.111 1.00 82.97 C
ATOM 22 N2 G B2080 123.292 109.305 32.638 1.00 83.25 N
ATOM 23 N3 G B2080 121.075 108.793 32.316 1.00 82.42 N
ATOM 24 C4 G B2080 119.996 108.276 32.940 1.00 82.16 C
ATOM 25 P A B2081 119.425 104.160 28.706 1.00 85.33 P
ATOM 26 OP1 A B2081 119.249 103.406 27.448 1.00 85.08 O
ATOM 27 OP2 A B2081 119.200 103.478 30.013 1.00 85.25 O
ATOM 28 O5' A B2081 120.911 104.743 28.714 1.00 86.10 O
TER

Atoms:
C2: (119.983,111.725,29.149)
OP1: (124.919,115.933,27.455)
OP2: (125.210,117.268,29.636)
C4: (121.782,110.347,28.625)
O5': (123.031,116.171,29.109)
C3': (120.438,116.389,29.995)
C1': (120.242,114.198,29.185)
O4': (120.520,115.013,28.060)
C5': (122.135,116.815,28.177)
P: (124.606,116.131,28.897)
O2: (118.793,111.888,29.468)
C4': (120.722,116.390,28.495)
C2': (120.795,114.964,30.387)
O2': (120.195,114.566,31.593)
N1: (120.809,112.852,28.959)
N3: (120.504,110.489,28.976)
N4: (122.261,109.106,28.486)
C6: (122.113,112.690,28.578)
C5: (122.633,111.469,28.404)
O3': (119.060,116.607,30.227)
OP1: (112.764,105.308,30.266)
OP2: (113.963,103.369,31.487)
C3': (118.113,106.168,29.832)
C1': (118.431,108.247,30.961)
C5': (115.426,106.428,29.788)
O6: (121.147,107.577,36.290)
O4': (117.040,108.043,30.762)
C8: (117.970,107.518,33.356)
C2: (122.130,108.846,33.111)
C6: (121.033,107.913,35.098)
C5: (119.882,107.838,34.245)
C4: (119.996,108.276,32.940)
P: (113.796,104.846,31.235)
C4': (116.846,107.022,29.742)
C2': (119.186,107.225,30.109)
O2': (119.707,107.843,28.940)
N1: (122.129,108.444,34.424)
N2: (123.292,109.305,32.638)
N3: (121.075,108.793,32.316)
N7: (118.597,107.368,34.494)
N9: (118.768,108.037,32.364)
O5': (115.228,105.517,30.920)
O3': (118.447,105.450,28.633)
Image (generated by PyMOL):
PyMOL image
show in jmol