Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2089:A2080
Extra
PDB:
ATOM 1 O3' U A2088 124.923 114.974 29.453 1.00 86.46 O
ATOM 2 P C A2089 124.498 116.348 28.752 1.00 86.25 P
ATOM 3 OP1 C A2089 124.826 116.185 27.317 1.00 87.34 O
ATOM 4 OP2 C A2089 125.069 117.492 29.517 1.00 86.68 O
ATOM 5 O5' C A2089 122.921 116.358 28.920 1.00 86.03 O
ATOM 6 C5' C A2089 122.050 117.009 27.972 1.00 83.41 C
ATOM 7 C4' C A2089 120.629 116.600 28.262 1.00 81.37 C
ATOM 8 O4' C A2089 120.437 115.214 27.853 1.00 80.99 O
ATOM 9 C3' C A2089 120.324 116.630 29.757 1.00 80.27 C
ATOM 10 O3' C A2089 118.943 116.868 29.967 1.00 78.45 O
ATOM 11 C2' C A2089 120.697 115.215 30.181 1.00 79.81 C
ATOM 12 O2' C A2089 120.123 114.828 31.406 1.00 79.25 O
ATOM 13 C1' C A2089 120.162 114.421 28.992 1.00 81.09 C
ATOM 14 N1 C A2089 120.729 113.074 28.784 1.00 82.76 N
ATOM 15 C2 C A2089 119.885 111.948 28.955 1.00 83.31 C
ATOM 16 O2 C A2089 118.697 112.122 29.273 1.00 82.61 O
ATOM 17 N3 C A2089 120.393 110.709 28.767 1.00 83.67 N
ATOM 18 C4 C A2089 121.676 110.561 28.427 1.00 84.08 C
ATOM 19 N4 C A2089 122.143 109.321 28.266 1.00 84.52 N
ATOM 20 C5 C A2089 122.546 111.680 28.241 1.00 83.92 C
ATOM 21 C6 C A2089 122.039 112.904 28.428 1.00 83.20 C
ATOM 22 P A A2090 118.474 118.204 30.717 1.00 77.12 P
ATOM 23 OP1 A A2090 118.603 119.328 29.748 1.00 76.78 O
ATOM 24 OP2 A A2090 119.208 118.253 32.008 1.00 76.29 O
ATOM 25 O5' A A2090 116.921 117.958 30.986 1.00 75.32 O
TER
ATOM 1 O3' U B2079 113.286 105.727 32.444 1.00 75.07 O
ATOM 2 P G B2080 113.703 105.085 31.029 1.00 76.66 P
ATOM 3 OP1 G B2080 112.676 105.524 30.051 1.00 75.15 O
ATOM 4 OP2 G B2080 113.891 103.604 31.282 1.00 75.62 O
ATOM 5 O5' G B2080 115.121 105.790 30.729 1.00 79.56 O
ATOM 6 C5' G B2080 115.312 106.710 29.607 1.00 83.09 C
ATOM 7 C4' G B2080 116.740 107.283 29.547 1.00 84.92 C
ATOM 8 O4' G B2080 116.940 108.306 30.565 1.00 85.07 O
ATOM 9 C3' G B2080 118.002 106.417 29.634 1.00 86.28 C
ATOM 10 O3' G B2080 118.333 105.683 28.437 1.00 86.76 O
ATOM 11 C2' G B2080 119.081 107.469 29.918 1.00 87.16 C
ATOM 12 O2' G B2080 119.607 108.098 28.758 1.00 88.89 O
ATOM 13 C1' G B2080 118.333 108.495 30.777 1.00 86.60 C
ATOM 14 N9 G B2080 118.661 108.291 32.187 1.00 86.82 N
ATOM 15 C8 G B2080 117.862 107.765 33.175 1.00 86.94 C
ATOM 16 N7 G B2080 118.490 107.593 34.309 1.00 87.05 N
ATOM 17 C5 G B2080 119.775 108.064 34.063 1.00 87.04 C
ATOM 18 C6 G B2080 120.934 108.113 34.910 1.00 87.73 C
ATOM 19 O6 G B2080 121.063 107.732 36.088 1.00 87.65 O
ATOM 20 N1 G B2080 122.020 108.666 34.245 1.00 88.90 N
ATOM 21 C2 G B2080 122.012 109.107 32.943 1.00 89.10 C
ATOM 22 N2 G B2080 123.173 109.597 32.473 1.00 89.82 N
ATOM 23 N3 G B2080 120.953 109.067 32.153 1.00 88.04 N
ATOM 24 C4 G B2080 119.883 108.532 32.768 1.00 87.02 C
ATOM 25 P A B2081 119.302 104.380 28.521 1.00 87.34 P
ATOM 26 OP1 A B2081 119.139 103.594 27.278 1.00 87.41 O
ATOM 27 OP2 A B2081 119.089 103.720 29.838 1.00 86.77 O
ATOM 28 O5' A B2081 120.796 104.946 28.511 1.00 88.07 O
TER
ATOM 2 P C A2089 124.498 116.348 28.752 1.00 86.25 P
ATOM 3 OP1 C A2089 124.826 116.185 27.317 1.00 87.34 O
ATOM 4 OP2 C A2089 125.069 117.492 29.517 1.00 86.68 O
ATOM 5 O5' C A2089 122.921 116.358 28.920 1.00 86.03 O
ATOM 6 C5' C A2089 122.050 117.009 27.972 1.00 83.41 C
ATOM 7 C4' C A2089 120.629 116.600 28.262 1.00 81.37 C
ATOM 8 O4' C A2089 120.437 115.214 27.853 1.00 80.99 O
ATOM 9 C3' C A2089 120.324 116.630 29.757 1.00 80.27 C
ATOM 10 O3' C A2089 118.943 116.868 29.967 1.00 78.45 O
ATOM 11 C2' C A2089 120.697 115.215 30.181 1.00 79.81 C
ATOM 12 O2' C A2089 120.123 114.828 31.406 1.00 79.25 O
ATOM 13 C1' C A2089 120.162 114.421 28.992 1.00 81.09 C
ATOM 14 N1 C A2089 120.729 113.074 28.784 1.00 82.76 N
ATOM 15 C2 C A2089 119.885 111.948 28.955 1.00 83.31 C
ATOM 16 O2 C A2089 118.697 112.122 29.273 1.00 82.61 O
ATOM 17 N3 C A2089 120.393 110.709 28.767 1.00 83.67 N
ATOM 18 C4 C A2089 121.676 110.561 28.427 1.00 84.08 C
ATOM 19 N4 C A2089 122.143 109.321 28.266 1.00 84.52 N
ATOM 20 C5 C A2089 122.546 111.680 28.241 1.00 83.92 C
ATOM 21 C6 C A2089 122.039 112.904 28.428 1.00 83.20 C
ATOM 22 P A A2090 118.474 118.204 30.717 1.00 77.12 P
ATOM 23 OP1 A A2090 118.603 119.328 29.748 1.00 76.78 O
ATOM 24 OP2 A A2090 119.208 118.253 32.008 1.00 76.29 O
ATOM 25 O5' A A2090 116.921 117.958 30.986 1.00 75.32 O
TER
ATOM 1 O3' U B2079 113.286 105.727 32.444 1.00 75.07 O
ATOM 2 P G B2080 113.703 105.085 31.029 1.00 76.66 P
ATOM 3 OP1 G B2080 112.676 105.524 30.051 1.00 75.15 O
ATOM 4 OP2 G B2080 113.891 103.604 31.282 1.00 75.62 O
ATOM 5 O5' G B2080 115.121 105.790 30.729 1.00 79.56 O
ATOM 6 C5' G B2080 115.312 106.710 29.607 1.00 83.09 C
ATOM 7 C4' G B2080 116.740 107.283 29.547 1.00 84.92 C
ATOM 8 O4' G B2080 116.940 108.306 30.565 1.00 85.07 O
ATOM 9 C3' G B2080 118.002 106.417 29.634 1.00 86.28 C
ATOM 10 O3' G B2080 118.333 105.683 28.437 1.00 86.76 O
ATOM 11 C2' G B2080 119.081 107.469 29.918 1.00 87.16 C
ATOM 12 O2' G B2080 119.607 108.098 28.758 1.00 88.89 O
ATOM 13 C1' G B2080 118.333 108.495 30.777 1.00 86.60 C
ATOM 14 N9 G B2080 118.661 108.291 32.187 1.00 86.82 N
ATOM 15 C8 G B2080 117.862 107.765 33.175 1.00 86.94 C
ATOM 16 N7 G B2080 118.490 107.593 34.309 1.00 87.05 N
ATOM 17 C5 G B2080 119.775 108.064 34.063 1.00 87.04 C
ATOM 18 C6 G B2080 120.934 108.113 34.910 1.00 87.73 C
ATOM 19 O6 G B2080 121.063 107.732 36.088 1.00 87.65 O
ATOM 20 N1 G B2080 122.020 108.666 34.245 1.00 88.90 N
ATOM 21 C2 G B2080 122.012 109.107 32.943 1.00 89.10 C
ATOM 22 N2 G B2080 123.173 109.597 32.473 1.00 89.82 N
ATOM 23 N3 G B2080 120.953 109.067 32.153 1.00 88.04 N
ATOM 24 C4 G B2080 119.883 108.532 32.768 1.00 87.02 C
ATOM 25 P A B2081 119.302 104.380 28.521 1.00 87.34 P
ATOM 26 OP1 A B2081 119.139 103.594 27.278 1.00 87.41 O
ATOM 27 OP2 A B2081 119.089 103.720 29.838 1.00 86.77 O
ATOM 28 O5' A B2081 120.796 104.946 28.511 1.00 88.07 O
TER
Atoms:
C2: (119.885,111.948,28.955)
OP1: (124.826,116.185,27.317)
OP2: (125.069,117.492,29.517)
C4: (121.676,110.561,28.427)
O5': (122.921,116.358,28.920)
C3': (120.324,116.630,29.757)
C1': (120.162,114.421,28.992)
O4': (120.437,115.214,27.853)
C5': (122.050,117.009,27.972)
P: (124.498,116.348,28.752)
O2: (118.697,112.122,29.273)
C4': (120.629,116.600,28.262)
C2': (120.697,115.215,30.181)
O2': (120.123,114.828,31.406)
N1: (120.729,113.074,28.784)
N3: (120.393,110.709,28.767)
N4: (122.143,109.321,28.266)
C6: (122.039,112.904,28.428)
C5: (122.546,111.680,28.241)
O3': (118.943,116.868,29.967)
OP1: (124.826,116.185,27.317)
OP2: (125.069,117.492,29.517)
C4: (121.676,110.561,28.427)
O5': (122.921,116.358,28.920)
C3': (120.324,116.630,29.757)
C1': (120.162,114.421,28.992)
O4': (120.437,115.214,27.853)
C5': (122.050,117.009,27.972)
P: (124.498,116.348,28.752)
O2: (118.697,112.122,29.273)
C4': (120.629,116.600,28.262)
C2': (120.697,115.215,30.181)
O2': (120.123,114.828,31.406)
N1: (120.729,113.074,28.784)
N3: (120.393,110.709,28.767)
N4: (122.143,109.321,28.266)
C6: (122.039,112.904,28.428)
C5: (122.546,111.680,28.241)
O3': (118.943,116.868,29.967)
OP1: (112.676,105.524,30.051)
OP2: (113.891,103.604,31.282)
C3': (118.002,106.417,29.634)
C1': (118.333,108.495,30.777)
C5': (115.312,106.710,29.607)
O6: (121.063,107.732,36.088)
O4': (116.940,108.306,30.565)
C8: (117.862,107.765,33.175)
C2: (122.012,109.107,32.943)
C6: (120.934,108.113,34.910)
C5: (119.775,108.064,34.063)
C4: (119.883,108.532,32.768)
P: (113.703,105.085,31.029)
C4': (116.740,107.283,29.547)
C2': (119.081,107.469,29.918)
O2': (119.607,108.098,28.758)
N1: (122.020,108.666,34.245)
N2: (123.173,109.597,32.473)
N3: (120.953,109.067,32.153)
N7: (118.490,107.593,34.309)
N9: (118.661,108.291,32.187)
O5': (115.121,105.790,30.729)
O3': (118.333,105.683,28.437)
OP2: (113.891,103.604,31.282)
C3': (118.002,106.417,29.634)
C1': (118.333,108.495,30.777)
C5': (115.312,106.710,29.607)
O6: (121.063,107.732,36.088)
O4': (116.940,108.306,30.565)
C8: (117.862,107.765,33.175)
C2: (122.012,109.107,32.943)
C6: (120.934,108.113,34.910)
C5: (119.775,108.064,34.063)
C4: (119.883,108.532,32.768)
P: (113.703,105.085,31.029)
C4': (116.740,107.283,29.547)
C2': (119.081,107.469,29.918)
O2': (119.607,108.098,28.758)
N1: (122.020,108.666,34.245)
N2: (123.173,109.597,32.473)
N3: (120.953,109.067,32.153)
N7: (118.490,107.593,34.309)
N9: (118.661,108.291,32.187)
O5': (115.121,105.790,30.729)
O3': (118.333,105.683,28.437)
Image (generated by PyMOL):