ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ5:017:01277

Extra

PDB:
ATOM 1 O3' U A 16 27.461 130.500 64.012 1.00 36.09 O
ATOM 2 P U A 17 27.753 130.001 62.518 1.00 43.85 P
ATOM 3 OP1 U A 17 27.527 128.529 62.524 1.00 41.15 O
ATOM 4 OP2 U A 17 29.056 130.541 62.054 1.00 39.69 O
ATOM 5 O5' U A 17 26.589 130.689 61.671 1.00 43.09 O
ATOM 6 C5' U A 17 25.208 130.386 61.950 1.00 40.22 C
ATOM 7 C4' U A 17 24.297 131.347 61.235 1.00 40.57 C
ATOM 8 O4' U A 17 24.342 132.652 61.859 1.00 40.06 O
ATOM 9 C3' U A 17 24.622 131.635 59.781 1.00 41.02 C
ATOM 10 O3' U A 17 24.191 130.597 58.921 1.00 42.38 O
ATOM 11 C2' U A 17 23.864 132.928 59.550 1.00 41.09 C
ATOM 12 O2' U A 17 22.479 132.714 59.407 1.00 40.41 O
ATOM 13 C1' U A 17 24.107 133.649 60.876 1.00 41.17 C
ATOM 14 N1 U A 17 25.263 134.558 60.827 1.00 42.99 N
ATOM 15 C2 U A 17 25.025 135.872 60.473 1.00 42.89 C
ATOM 16 O2 U A 17 23.923 136.289 60.188 1.00 46.42 O
ATOM 17 N3 U A 17 26.130 136.682 60.464 1.00 42.33 N
ATOM 18 C4 U A 17 27.419 136.325 60.772 1.00 41.05 C
ATOM 19 O4 U A 17 28.297 137.177 60.737 1.00 41.95 O
ATOM 20 C5 U A 17 27.596 134.951 61.114 1.00 40.78 C
ATOM 21 C6 U A 17 26.540 134.131 61.129 1.00 42.56 C
ATOM 22 P G A 18 24.974 130.334 57.551 1.00 45.12 P
ATOM 23 OP1 G A 18 24.419 129.110 56.922 1.00 42.65 O
ATOM 24 OP2 G A 18 26.424 130.402 57.816 1.00 47.18 O
ATOM 25 O5' G A 18 24.597 131.615 56.685 1.00 45.10 O
TER

ATOM 1 O3' A B1276 13.693 130.352 59.058 1.00 40.96 O
ATOM 2 P A B1277 14.139 130.328 60.602 1.00 41.30 P
ATOM 3 OP1 A B1277 13.769 128.992 61.124 1.00 41.89 O
ATOM 4 OP2 A B1277 13.629 131.546 61.275 1.00 37.23 O
ATOM 5 O5' A B1277 15.724 130.431 60.519 1.00 40.99 O
ATOM 6 C5' A B1277 16.475 129.538 59.682 1.00 38.48 C
ATOM 7 C4' A B1277 17.905 130.007 59.578 1.00 41.35 C
ATOM 8 O4' A B1277 17.998 131.233 58.802 1.00 40.19 O
ATOM 9 C3' A B1277 18.585 130.351 60.896 1.00 40.82 C
ATOM 10 O3' A B1277 19.033 129.157 61.531 1.00 43.18 O
ATOM 11 C2' A B1277 19.737 131.230 60.420 1.00 37.95 C
ATOM 12 O2' A B1277 20.770 130.446 59.851 1.00 34.36 O
ATOM 13 C1' A B1277 19.048 132.043 59.316 1.00 36.49 C
ATOM 14 N9 A B1277 18.450 133.278 59.825 1.00 34.93 N
ATOM 15 C8 A B1277 17.148 133.475 60.200 1.00 33.90 C
ATOM 16 N7 A B1277 16.905 134.678 60.656 1.00 34.92 N
ATOM 17 C5 A B1277 18.128 135.323 60.571 1.00 34.01 C
ATOM 18 C6 A B1277 18.539 136.626 60.911 1.00 34.80 C
ATOM 19 N6 A B1277 17.737 137.552 61.451 1.00 32.84 N
ATOM 20 N1 A B1277 19.826 136.951 60.681 1.00 34.93 N
ATOM 21 C2 A B1277 20.643 136.024 60.166 1.00 34.43 C
ATOM 22 N3 A B1277 20.383 134.771 59.824 1.00 34.86 N
ATOM 23 C4 A B1277 19.089 134.477 60.049 1.00 35.10 C
ATOM 24 P G B1278 18.967 129.021 63.126 1.00 44.05 P
ATOM 25 OP1 G B1278 19.592 127.705 63.419 1.00 42.82 O
ATOM 26 OP2 G B1278 17.598 129.314 63.615 1.00 43.84 O
ATOM 27 O5' G B1278 19.911 130.189 63.656 1.00 45.93 O
TER

Atoms:
C4: (27.419,136.325,60.772)
N3: (26.130,136.682,60.464)
OP1: (27.527,128.529,62.524)
OP2: (29.056,130.541,62.054)
C2: (25.025,135.872,60.473)
C1': (24.107,133.649,60.876)
C3': (24.622,131.635,59.781)
O5': (26.589,130.689,61.671)
O4': (24.342,132.652,61.859)
C5': (25.208,130.386,61.950)
P: (27.753,130.001,62.518)
C4': (24.297,131.347,61.235)
C2': (23.864,132.928,59.550)
O2': (22.479,132.714,59.407)
N1: (25.263,134.558,60.827)
O4: (28.297,137.177,60.737)
O2: (23.923,136.289,60.188)
C6: (26.540,134.131,61.129)
C5: (27.596,134.951,61.114)
O3': (24.191,130.597,58.921)
OP1: (13.769,128.992,61.124)
OP2: (13.629,131.546,61.275)
C3': (18.585,130.351,60.896)
C1': (19.048,132.043,59.316)
C5': (16.475,129.538,59.682)
O4': (17.998,131.233,58.802)
C8: (17.148,133.475,60.200)
O2': (20.770,130.446,59.851)
C6: (18.539,136.626,60.911)
C5: (18.128,135.323,60.571)
C4: (19.089,134.477,60.049)
P: (14.139,130.328,60.602)
C4': (17.905,130.007,59.578)
C2': (19.737,131.230,60.420)
C2: (20.643,136.024,60.166)
N1: (19.826,136.951,60.681)
N3: (20.383,134.771,59.824)
N6: (17.737,137.552,61.451)
N7: (16.905,134.678,60.656)
N9: (18.450,133.278,59.825)
O5': (15.724,130.431,60.519)
O3': (19.033,129.157,61.531)
Image (generated by PyMOL):
PyMOL image
show in jmol