Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02089:02080
Extra
PDB:
ATOM 1 O3' U A2088 124.811 115.350 29.040 1.00 77.14 O
ATOM 2 P C A2089 124.240 116.755 28.506 1.00 76.52 P
ATOM 3 OP1 C A2089 125.145 117.258 27.448 1.00 77.23 O
ATOM 4 OP2 C A2089 123.927 117.622 29.668 1.00 76.71 O
ATOM 5 O5' C A2089 122.881 116.296 27.811 1.00 76.19 O
ATOM 6 C5' C A2089 121.896 117.242 27.345 1.00 73.72 C
ATOM 7 C4' C A2089 120.517 116.814 27.803 1.00 70.96 C
ATOM 8 O4' C A2089 120.297 115.419 27.437 1.00 70.09 O
ATOM 9 C3' C A2089 120.299 116.869 29.312 1.00 69.50 C
ATOM 10 O3' C A2089 118.914 117.071 29.547 1.00 67.27 O
ATOM 11 C2' C A2089 120.677 115.460 29.745 1.00 68.74 C
ATOM 12 O2' C A2089 120.128 115.086 30.985 1.00 67.78 O
ATOM 13 C1' C A2089 120.065 114.654 28.607 1.00 70.17 C
ATOM 14 N1 C A2089 120.617 113.304 28.418 1.00 71.81 N
ATOM 15 C2 C A2089 119.765 112.195 28.574 1.00 73.03 C
ATOM 16 O2 C A2089 118.572 112.381 28.885 1.00 72.66 O
ATOM 17 N3 C A2089 120.262 110.953 28.382 1.00 73.30 N
ATOM 18 C4 C A2089 121.545 110.790 28.053 1.00 73.33 C
ATOM 19 N4 C A2089 121.989 109.546 27.868 1.00 74.60 N
ATOM 20 C5 C A2089 122.431 111.894 27.898 1.00 73.00 C
ATOM 21 C6 C A2089 121.931 113.121 28.089 1.00 72.72 C
ATOM 22 P A A2090 118.429 118.310 30.434 1.00 67.30 P
ATOM 23 OP1 A A2090 118.514 119.524 29.581 1.00 67.11 O
ATOM 24 OP2 A A2090 119.160 118.261 31.724 1.00 65.67 O
ATOM 25 O5' A A2090 116.887 118.004 30.696 1.00 66.11 O
TER
ATOM 1 O3' U B2079 113.242 105.888 32.076 1.00 60.93 O
ATOM 2 P G B2080 113.631 105.249 30.652 1.00 64.36 P
ATOM 3 OP1 G B2080 112.622 105.724 29.658 1.00 62.12 O
ATOM 4 OP2 G B2080 113.818 103.788 30.866 1.00 64.49 O
ATOM 5 O5' G B2080 115.059 105.894 30.326 1.00 66.04 O
ATOM 6 C5' G B2080 115.234 106.735 29.172 1.00 70.14 C
ATOM 7 C4' G B2080 116.603 107.395 29.158 1.00 72.81 C
ATOM 8 O4' G B2080 116.760 108.324 30.262 1.00 72.46 O
ATOM 9 C3' G B2080 117.866 106.557 29.269 1.00 74.15 C
ATOM 10 O3' G B2080 118.164 105.831 28.079 1.00 77.77 O
ATOM 11 C2' G B2080 118.898 107.657 29.484 1.00 73.74 C
ATOM 12 O2' G B2080 119.176 108.362 28.290 1.00 72.78 O
ATOM 13 C1' G B2080 118.146 108.594 30.436 1.00 73.47 C
ATOM 14 N9 G B2080 118.530 108.318 31.817 1.00 74.07 N
ATOM 15 C8 G B2080 117.803 107.665 32.784 1.00 74.90 C
ATOM 16 N7 G B2080 118.458 107.519 33.905 1.00 75.09 N
ATOM 17 C5 G B2080 119.685 108.123 33.667 1.00 74.50 C
ATOM 18 C6 G B2080 120.819 108.266 34.507 1.00 75.15 C
ATOM 19 O6 G B2080 120.974 107.873 35.670 1.00 75.40 O
ATOM 20 N1 G B2080 121.849 108.945 33.864 1.00 76.10 N
ATOM 21 C2 G B2080 121.798 109.423 32.580 1.00 75.68 C
ATOM 22 N2 G B2080 122.894 110.050 32.140 1.00 76.00 N
ATOM 23 N3 G B2080 120.749 109.294 31.785 1.00 74.95 N
ATOM 24 C4 G B2080 119.737 108.637 32.389 1.00 74.28 C
ATOM 25 P A B2081 119.106 104.522 28.149 1.00 79.38 P
ATOM 26 OP1 A B2081 118.878 103.791 26.877 1.00 78.79 O
ATOM 27 OP2 A B2081 118.902 103.821 29.441 1.00 78.43 O
ATOM 28 O5' A B2081 120.592 105.099 28.137 1.00 81.63 O
TER
ATOM 2 P C A2089 124.240 116.755 28.506 1.00 76.52 P
ATOM 3 OP1 C A2089 125.145 117.258 27.448 1.00 77.23 O
ATOM 4 OP2 C A2089 123.927 117.622 29.668 1.00 76.71 O
ATOM 5 O5' C A2089 122.881 116.296 27.811 1.00 76.19 O
ATOM 6 C5' C A2089 121.896 117.242 27.345 1.00 73.72 C
ATOM 7 C4' C A2089 120.517 116.814 27.803 1.00 70.96 C
ATOM 8 O4' C A2089 120.297 115.419 27.437 1.00 70.09 O
ATOM 9 C3' C A2089 120.299 116.869 29.312 1.00 69.50 C
ATOM 10 O3' C A2089 118.914 117.071 29.547 1.00 67.27 O
ATOM 11 C2' C A2089 120.677 115.460 29.745 1.00 68.74 C
ATOM 12 O2' C A2089 120.128 115.086 30.985 1.00 67.78 O
ATOM 13 C1' C A2089 120.065 114.654 28.607 1.00 70.17 C
ATOM 14 N1 C A2089 120.617 113.304 28.418 1.00 71.81 N
ATOM 15 C2 C A2089 119.765 112.195 28.574 1.00 73.03 C
ATOM 16 O2 C A2089 118.572 112.381 28.885 1.00 72.66 O
ATOM 17 N3 C A2089 120.262 110.953 28.382 1.00 73.30 N
ATOM 18 C4 C A2089 121.545 110.790 28.053 1.00 73.33 C
ATOM 19 N4 C A2089 121.989 109.546 27.868 1.00 74.60 N
ATOM 20 C5 C A2089 122.431 111.894 27.898 1.00 73.00 C
ATOM 21 C6 C A2089 121.931 113.121 28.089 1.00 72.72 C
ATOM 22 P A A2090 118.429 118.310 30.434 1.00 67.30 P
ATOM 23 OP1 A A2090 118.514 119.524 29.581 1.00 67.11 O
ATOM 24 OP2 A A2090 119.160 118.261 31.724 1.00 65.67 O
ATOM 25 O5' A A2090 116.887 118.004 30.696 1.00 66.11 O
TER
ATOM 1 O3' U B2079 113.242 105.888 32.076 1.00 60.93 O
ATOM 2 P G B2080 113.631 105.249 30.652 1.00 64.36 P
ATOM 3 OP1 G B2080 112.622 105.724 29.658 1.00 62.12 O
ATOM 4 OP2 G B2080 113.818 103.788 30.866 1.00 64.49 O
ATOM 5 O5' G B2080 115.059 105.894 30.326 1.00 66.04 O
ATOM 6 C5' G B2080 115.234 106.735 29.172 1.00 70.14 C
ATOM 7 C4' G B2080 116.603 107.395 29.158 1.00 72.81 C
ATOM 8 O4' G B2080 116.760 108.324 30.262 1.00 72.46 O
ATOM 9 C3' G B2080 117.866 106.557 29.269 1.00 74.15 C
ATOM 10 O3' G B2080 118.164 105.831 28.079 1.00 77.77 O
ATOM 11 C2' G B2080 118.898 107.657 29.484 1.00 73.74 C
ATOM 12 O2' G B2080 119.176 108.362 28.290 1.00 72.78 O
ATOM 13 C1' G B2080 118.146 108.594 30.436 1.00 73.47 C
ATOM 14 N9 G B2080 118.530 108.318 31.817 1.00 74.07 N
ATOM 15 C8 G B2080 117.803 107.665 32.784 1.00 74.90 C
ATOM 16 N7 G B2080 118.458 107.519 33.905 1.00 75.09 N
ATOM 17 C5 G B2080 119.685 108.123 33.667 1.00 74.50 C
ATOM 18 C6 G B2080 120.819 108.266 34.507 1.00 75.15 C
ATOM 19 O6 G B2080 120.974 107.873 35.670 1.00 75.40 O
ATOM 20 N1 G B2080 121.849 108.945 33.864 1.00 76.10 N
ATOM 21 C2 G B2080 121.798 109.423 32.580 1.00 75.68 C
ATOM 22 N2 G B2080 122.894 110.050 32.140 1.00 76.00 N
ATOM 23 N3 G B2080 120.749 109.294 31.785 1.00 74.95 N
ATOM 24 C4 G B2080 119.737 108.637 32.389 1.00 74.28 C
ATOM 25 P A B2081 119.106 104.522 28.149 1.00 79.38 P
ATOM 26 OP1 A B2081 118.878 103.791 26.877 1.00 78.79 O
ATOM 27 OP2 A B2081 118.902 103.821 29.441 1.00 78.43 O
ATOM 28 O5' A B2081 120.592 105.099 28.137 1.00 81.63 O
TER
Atoms:
C2: (119.765,112.195,28.574)
OP1: (125.145,117.258,27.448)
OP2: (123.927,117.622,29.668)
C4: (121.545,110.790,28.053)
O5': (122.881,116.296,27.811)
C3': (120.299,116.869,29.312)
C1': (120.065,114.654,28.607)
O4': (120.297,115.419,27.437)
C5': (121.896,117.242,27.345)
P: (124.240,116.755,28.506)
O2: (118.572,112.381,28.885)
C4': (120.517,116.814,27.803)
C2': (120.677,115.460,29.745)
O2': (120.128,115.086,30.985)
N1: (120.617,113.304,28.418)
N3: (120.262,110.953,28.382)
N4: (121.989,109.546,27.868)
C6: (121.931,113.121,28.089)
C5: (122.431,111.894,27.898)
O3': (118.914,117.071,29.547)
OP1: (125.145,117.258,27.448)
OP2: (123.927,117.622,29.668)
C4: (121.545,110.790,28.053)
O5': (122.881,116.296,27.811)
C3': (120.299,116.869,29.312)
C1': (120.065,114.654,28.607)
O4': (120.297,115.419,27.437)
C5': (121.896,117.242,27.345)
P: (124.240,116.755,28.506)
O2: (118.572,112.381,28.885)
C4': (120.517,116.814,27.803)
C2': (120.677,115.460,29.745)
O2': (120.128,115.086,30.985)
N1: (120.617,113.304,28.418)
N3: (120.262,110.953,28.382)
N4: (121.989,109.546,27.868)
C6: (121.931,113.121,28.089)
C5: (122.431,111.894,27.898)
O3': (118.914,117.071,29.547)
OP1: (112.622,105.724,29.658)
OP2: (113.818,103.788,30.866)
C3': (117.866,106.557,29.269)
C1': (118.146,108.594,30.436)
C5': (115.234,106.735,29.172)
O6: (120.974,107.873,35.670)
O4': (116.760,108.324,30.262)
C8: (117.803,107.665,32.784)
C2: (121.798,109.423,32.580)
C6: (120.819,108.266,34.507)
C5: (119.685,108.123,33.667)
C4: (119.737,108.637,32.389)
P: (113.631,105.249,30.652)
C4': (116.603,107.395,29.158)
C2': (118.898,107.657,29.484)
O2': (119.176,108.362,28.290)
N1: (121.849,108.945,33.864)
N2: (122.894,110.050,32.140)
N3: (120.749,109.294,31.785)
N7: (118.458,107.519,33.905)
N9: (118.530,108.318,31.817)
O5': (115.059,105.894,30.326)
O3': (118.164,105.831,28.079)
OP2: (113.818,103.788,30.866)
C3': (117.866,106.557,29.269)
C1': (118.146,108.594,30.436)
C5': (115.234,106.735,29.172)
O6: (120.974,107.873,35.670)
O4': (116.760,108.324,30.262)
C8: (117.803,107.665,32.784)
C2: (121.798,109.423,32.580)
C6: (120.819,108.266,34.507)
C5: (119.685,108.123,33.667)
C4: (119.737,108.637,32.389)
P: (113.631,105.249,30.652)
C4': (116.603,107.395,29.158)
C2': (118.898,107.657,29.484)
O2': (119.176,108.362,28.290)
N1: (121.849,108.945,33.864)
N2: (122.894,110.050,32.140)
N3: (120.749,109.294,31.785)
N7: (118.458,107.519,33.905)
N9: (118.530,108.318,31.817)
O5': (115.059,105.894,30.326)
O3': (118.164,105.831,28.079)
Image (generated by PyMOL):