Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02089:02080
Extra
PDB:
ATOM 1 O3' U A2088 124.768 115.210 29.032 1.00 71.18 O
ATOM 2 P C A2089 124.272 116.636 28.481 1.00 69.68 P
ATOM 3 OP1 C A2089 125.234 117.097 27.460 1.00 70.83 O
ATOM 4 OP2 C A2089 123.955 117.522 29.628 1.00 69.95 O
ATOM 5 O5' C A2089 122.926 116.217 27.734 1.00 69.53 O
ATOM 6 C5' C A2089 121.882 117.164 27.428 1.00 67.19 C
ATOM 7 C4' C A2089 120.548 116.645 27.928 1.00 65.38 C
ATOM 8 O4' C A2089 120.367 115.260 27.502 1.00 64.20 O
ATOM 9 C3' C A2089 120.391 116.620 29.447 1.00 64.76 C
ATOM 10 O3' C A2089 119.015 116.758 29.757 1.00 63.86 O
ATOM 11 C2' C A2089 120.802 115.200 29.793 1.00 63.79 C
ATOM 12 O2' C A2089 120.288 114.765 31.027 1.00 62.56 O
ATOM 13 C1' C A2089 120.156 114.446 28.639 1.00 65.35 C
ATOM 14 N1 C A2089 120.702 113.105 28.395 1.00 67.54 N
ATOM 15 C2 C A2089 119.865 111.992 28.583 1.00 69.48 C
ATOM 16 O2 C A2089 118.684 112.170 28.939 1.00 70.01 O
ATOM 17 N3 C A2089 120.361 110.754 28.375 1.00 70.12 N
ATOM 18 C4 C A2089 121.631 110.599 27.996 1.00 70.34 C
ATOM 19 N4 C A2089 122.079 109.357 27.811 1.00 71.42 N
ATOM 20 C5 C A2089 122.499 111.709 27.793 1.00 70.04 C
ATOM 21 C6 C A2089 121.998 112.932 28.000 1.00 68.82 C
ATOM 22 P A A2090 118.459 118.150 30.306 1.00 63.73 P
ATOM 23 OP1 A A2090 118.566 119.137 29.201 1.00 62.59 O
ATOM 24 OP2 A A2090 119.132 118.413 31.603 1.00 62.88 O
ATOM 25 O5' A A2090 116.912 117.863 30.558 1.00 62.93 O
TER
ATOM 1 O3' U B2079 113.211 105.613 31.927 1.00 63.44 O
ATOM 2 P G B2080 113.658 105.014 30.504 1.00 65.75 P
ATOM 3 OP1 G B2080 112.662 105.476 29.493 1.00 65.13 O
ATOM 4 OP2 G B2080 113.881 103.558 30.700 1.00 66.34 O
ATOM 5 O5' G B2080 115.074 105.705 30.227 1.00 66.49 O
ATOM 6 C5' G B2080 115.255 106.577 29.099 1.00 70.30 C
ATOM 7 C4' G B2080 116.615 107.258 29.121 1.00 73.50 C
ATOM 8 O4' G B2080 116.753 108.159 30.253 1.00 74.05 O
ATOM 9 C3' G B2080 117.888 106.438 29.235 1.00 74.69 C
ATOM 10 O3' G B2080 118.205 105.719 28.044 1.00 78.05 O
ATOM 11 C2' G B2080 118.900 107.555 29.460 1.00 74.63 C
ATOM 12 O2' G B2080 119.162 108.283 28.275 1.00 74.10 O
ATOM 13 C1' G B2080 118.132 108.468 30.421 1.00 74.31 C
ATOM 14 N9 G B2080 118.536 108.199 31.798 1.00 74.79 N
ATOM 15 C8 G B2080 117.821 107.561 32.783 1.00 75.72 C
ATOM 16 N7 G B2080 118.495 107.414 33.892 1.00 75.84 N
ATOM 17 C5 G B2080 119.724 108.004 33.628 1.00 75.26 C
ATOM 18 C6 G B2080 120.875 108.141 34.449 1.00 75.50 C
ATOM 19 O6 G B2080 121.047 107.754 35.610 1.00 75.27 O
ATOM 20 N1 G B2080 121.897 108.811 33.785 1.00 76.24 N
ATOM 21 C2 G B2080 121.824 109.288 32.499 1.00 76.65 C
ATOM 22 N2 G B2080 122.913 109.917 32.037 1.00 76.87 N
ATOM 23 N3 G B2080 120.761 109.160 31.723 1.00 75.61 N
ATOM 24 C4 G B2080 119.757 108.511 32.348 1.00 75.03 C
ATOM 25 P A B2081 119.142 104.409 28.123 1.00 78.33 P
ATOM 26 OP1 A B2081 118.891 103.643 26.876 1.00 78.33 O
ATOM 27 OP2 A B2081 118.950 103.749 29.438 1.00 77.54 O
ATOM 28 O5' A B2081 120.628 104.983 28.080 1.00 80.69 O
TER
ATOM 2 P C A2089 124.272 116.636 28.481 1.00 69.68 P
ATOM 3 OP1 C A2089 125.234 117.097 27.460 1.00 70.83 O
ATOM 4 OP2 C A2089 123.955 117.522 29.628 1.00 69.95 O
ATOM 5 O5' C A2089 122.926 116.217 27.734 1.00 69.53 O
ATOM 6 C5' C A2089 121.882 117.164 27.428 1.00 67.19 C
ATOM 7 C4' C A2089 120.548 116.645 27.928 1.00 65.38 C
ATOM 8 O4' C A2089 120.367 115.260 27.502 1.00 64.20 O
ATOM 9 C3' C A2089 120.391 116.620 29.447 1.00 64.76 C
ATOM 10 O3' C A2089 119.015 116.758 29.757 1.00 63.86 O
ATOM 11 C2' C A2089 120.802 115.200 29.793 1.00 63.79 C
ATOM 12 O2' C A2089 120.288 114.765 31.027 1.00 62.56 O
ATOM 13 C1' C A2089 120.156 114.446 28.639 1.00 65.35 C
ATOM 14 N1 C A2089 120.702 113.105 28.395 1.00 67.54 N
ATOM 15 C2 C A2089 119.865 111.992 28.583 1.00 69.48 C
ATOM 16 O2 C A2089 118.684 112.170 28.939 1.00 70.01 O
ATOM 17 N3 C A2089 120.361 110.754 28.375 1.00 70.12 N
ATOM 18 C4 C A2089 121.631 110.599 27.996 1.00 70.34 C
ATOM 19 N4 C A2089 122.079 109.357 27.811 1.00 71.42 N
ATOM 20 C5 C A2089 122.499 111.709 27.793 1.00 70.04 C
ATOM 21 C6 C A2089 121.998 112.932 28.000 1.00 68.82 C
ATOM 22 P A A2090 118.459 118.150 30.306 1.00 63.73 P
ATOM 23 OP1 A A2090 118.566 119.137 29.201 1.00 62.59 O
ATOM 24 OP2 A A2090 119.132 118.413 31.603 1.00 62.88 O
ATOM 25 O5' A A2090 116.912 117.863 30.558 1.00 62.93 O
TER
ATOM 1 O3' U B2079 113.211 105.613 31.927 1.00 63.44 O
ATOM 2 P G B2080 113.658 105.014 30.504 1.00 65.75 P
ATOM 3 OP1 G B2080 112.662 105.476 29.493 1.00 65.13 O
ATOM 4 OP2 G B2080 113.881 103.558 30.700 1.00 66.34 O
ATOM 5 O5' G B2080 115.074 105.705 30.227 1.00 66.49 O
ATOM 6 C5' G B2080 115.255 106.577 29.099 1.00 70.30 C
ATOM 7 C4' G B2080 116.615 107.258 29.121 1.00 73.50 C
ATOM 8 O4' G B2080 116.753 108.159 30.253 1.00 74.05 O
ATOM 9 C3' G B2080 117.888 106.438 29.235 1.00 74.69 C
ATOM 10 O3' G B2080 118.205 105.719 28.044 1.00 78.05 O
ATOM 11 C2' G B2080 118.900 107.555 29.460 1.00 74.63 C
ATOM 12 O2' G B2080 119.162 108.283 28.275 1.00 74.10 O
ATOM 13 C1' G B2080 118.132 108.468 30.421 1.00 74.31 C
ATOM 14 N9 G B2080 118.536 108.199 31.798 1.00 74.79 N
ATOM 15 C8 G B2080 117.821 107.561 32.783 1.00 75.72 C
ATOM 16 N7 G B2080 118.495 107.414 33.892 1.00 75.84 N
ATOM 17 C5 G B2080 119.724 108.004 33.628 1.00 75.26 C
ATOM 18 C6 G B2080 120.875 108.141 34.449 1.00 75.50 C
ATOM 19 O6 G B2080 121.047 107.754 35.610 1.00 75.27 O
ATOM 20 N1 G B2080 121.897 108.811 33.785 1.00 76.24 N
ATOM 21 C2 G B2080 121.824 109.288 32.499 1.00 76.65 C
ATOM 22 N2 G B2080 122.913 109.917 32.037 1.00 76.87 N
ATOM 23 N3 G B2080 120.761 109.160 31.723 1.00 75.61 N
ATOM 24 C4 G B2080 119.757 108.511 32.348 1.00 75.03 C
ATOM 25 P A B2081 119.142 104.409 28.123 1.00 78.33 P
ATOM 26 OP1 A B2081 118.891 103.643 26.876 1.00 78.33 O
ATOM 27 OP2 A B2081 118.950 103.749 29.438 1.00 77.54 O
ATOM 28 O5' A B2081 120.628 104.983 28.080 1.00 80.69 O
TER
Atoms:
C2: (119.865,111.992,28.583)
OP1: (125.234,117.097,27.460)
OP2: (123.955,117.522,29.628)
C4: (121.631,110.599,27.996)
O5': (122.926,116.217,27.734)
C3': (120.391,116.620,29.447)
C1': (120.156,114.446,28.639)
O4': (120.367,115.260,27.502)
C5': (121.882,117.164,27.428)
P: (124.272,116.636,28.481)
O2: (118.684,112.170,28.939)
C4': (120.548,116.645,27.928)
C2': (120.802,115.200,29.793)
O2': (120.288,114.765,31.027)
N1: (120.702,113.105,28.395)
N3: (120.361,110.754,28.375)
N4: (122.079,109.357,27.811)
C6: (121.998,112.932,28.000)
C5: (122.499,111.709,27.793)
O3': (119.015,116.758,29.757)
OP1: (125.234,117.097,27.460)
OP2: (123.955,117.522,29.628)
C4: (121.631,110.599,27.996)
O5': (122.926,116.217,27.734)
C3': (120.391,116.620,29.447)
C1': (120.156,114.446,28.639)
O4': (120.367,115.260,27.502)
C5': (121.882,117.164,27.428)
P: (124.272,116.636,28.481)
O2: (118.684,112.170,28.939)
C4': (120.548,116.645,27.928)
C2': (120.802,115.200,29.793)
O2': (120.288,114.765,31.027)
N1: (120.702,113.105,28.395)
N3: (120.361,110.754,28.375)
N4: (122.079,109.357,27.811)
C6: (121.998,112.932,28.000)
C5: (122.499,111.709,27.793)
O3': (119.015,116.758,29.757)
OP1: (112.662,105.476,29.493)
OP2: (113.881,103.558,30.700)
C3': (117.888,106.438,29.235)
C1': (118.132,108.468,30.421)
C5': (115.255,106.577,29.099)
O6: (121.047,107.754,35.610)
O4': (116.753,108.159,30.253)
C8: (117.821,107.561,32.783)
C2: (121.824,109.288,32.499)
C6: (120.875,108.141,34.449)
C5: (119.724,108.004,33.628)
C4: (119.757,108.511,32.348)
P: (113.658,105.014,30.504)
C4': (116.615,107.258,29.121)
C2': (118.900,107.555,29.460)
O2': (119.162,108.283,28.275)
N1: (121.897,108.811,33.785)
N2: (122.913,109.917,32.037)
N3: (120.761,109.160,31.723)
N7: (118.495,107.414,33.892)
N9: (118.536,108.199,31.798)
O5': (115.074,105.705,30.227)
O3': (118.205,105.719,28.044)
OP2: (113.881,103.558,30.700)
C3': (117.888,106.438,29.235)
C1': (118.132,108.468,30.421)
C5': (115.255,106.577,29.099)
O6: (121.047,107.754,35.610)
O4': (116.753,108.159,30.253)
C8: (117.821,107.561,32.783)
C2: (121.824,109.288,32.499)
C6: (120.875,108.141,34.449)
C5: (119.724,108.004,33.628)
C4: (119.757,108.511,32.348)
P: (113.658,105.014,30.504)
C4': (116.615,107.258,29.121)
C2': (118.900,107.555,29.460)
O2': (119.162,108.283,28.275)
N1: (121.897,108.811,33.785)
N2: (122.913,109.917,32.037)
N3: (120.761,109.160,31.723)
N7: (118.495,107.414,33.892)
N9: (118.536,108.199,31.798)
O5': (115.074,105.705,30.227)
O3': (118.205,105.719,28.044)
Image (generated by PyMOL):