Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02089:02080
Extra
PDB:
ATOM 1 O3' U A2088 125.156 115.551 29.409 1.00 89.81 O
ATOM 2 P C A2089 124.610 116.964 28.870 1.00 89.59 P
ATOM 3 OP1 C A2089 125.589 117.484 27.889 1.00 89.73 O
ATOM 4 OP2 C A2089 124.204 117.820 30.019 1.00 89.90 O
ATOM 5 O5' C A2089 123.304 116.506 28.075 1.00 88.93 O
ATOM 6 C5' C A2089 122.265 117.432 27.699 1.00 85.95 C
ATOM 7 C4' C A2089 120.924 116.941 28.209 1.00 84.13 C
ATOM 8 O4' C A2089 120.744 115.542 27.834 1.00 83.35 O
ATOM 9 C3' C A2089 120.745 116.976 29.726 1.00 82.81 C
ATOM 10 O3' C A2089 119.358 117.117 30.003 1.00 81.83 O
ATOM 11 C2' C A2089 121.139 115.565 30.130 1.00 82.14 C
ATOM 12 O2' C A2089 120.591 115.198 31.370 1.00 82.13 O
ATOM 13 C1' C A2089 120.492 114.779 28.998 1.00 83.08 C
ATOM 14 N1 C A2089 120.968 113.402 28.799 1.00 84.42 N
ATOM 15 C2 C A2089 120.062 112.340 28.990 1.00 85.61 C
ATOM 16 O2 C A2089 118.886 112.591 29.319 1.00 84.42 O
ATOM 17 N3 C A2089 120.490 111.068 28.810 1.00 86.37 N
ATOM 18 C4 C A2089 121.756 110.833 28.457 1.00 86.42 C
ATOM 19 N4 C A2089 122.136 109.562 28.299 1.00 86.63 N
ATOM 20 C5 C A2089 122.692 111.891 28.253 1.00 86.32 C
ATOM 21 C6 C A2089 122.260 113.147 28.434 1.00 85.54 C
ATOM 22 P A A2090 118.812 118.445 30.704 1.00 81.74 P
ATOM 23 OP1 A A2090 118.847 119.529 29.687 1.00 81.26 O
ATOM 24 OP2 A A2090 119.534 118.604 31.994 1.00 79.30 O
ATOM 25 O5' A A2090 117.276 118.130 30.977 1.00 80.95 O
TER
ATOM 1 O3' U B2079 113.657 106.045 32.385 1.00 75.48 O
ATOM 2 P G B2080 114.012 105.388 30.956 1.00 78.70 P
ATOM 3 OP1 G B2080 113.011 105.854 29.955 1.00 76.87 O
ATOM 4 OP2 G B2080 114.184 103.926 31.200 1.00 77.11 O
ATOM 5 O5' G B2080 115.446 106.010 30.607 1.00 81.20 O
ATOM 6 C5' G B2080 115.631 106.860 29.455 1.00 84.64 C
ATOM 7 C4' G B2080 117.016 107.496 29.443 1.00 87.39 C
ATOM 8 O4' G B2080 117.206 108.378 30.584 1.00 86.85 O
ATOM 9 C3' G B2080 118.266 106.629 29.536 1.00 89.00 C
ATOM 10 O3' G B2080 118.559 105.895 28.347 1.00 91.75 O
ATOM 11 C2' G B2080 119.324 107.706 29.757 1.00 88.54 C
ATOM 12 O2' G B2080 119.634 108.412 28.569 1.00 89.34 O
ATOM 13 C1' G B2080 118.597 108.652 30.718 1.00 87.59 C
ATOM 14 N9 G B2080 119.032 108.413 32.093 1.00 87.04 N
ATOM 15 C8 G B2080 118.391 107.698 33.077 1.00 86.97 C
ATOM 16 N7 G B2080 119.081 107.619 34.184 1.00 86.59 N
ATOM 17 C5 G B2080 120.241 108.334 33.920 1.00 86.40 C
ATOM 18 C6 G B2080 121.379 108.588 34.739 1.00 87.08 C
ATOM 19 O6 G B2080 121.596 108.218 35.903 1.00 86.18 O
ATOM 20 N1 G B2080 122.327 109.359 34.072 1.00 87.65 N
ATOM 21 C2 G B2080 122.202 109.825 32.785 1.00 87.89 C
ATOM 22 N2 G B2080 123.226 110.553 32.314 1.00 87.69 N
ATOM 23 N3 G B2080 121.152 109.595 32.015 1.00 87.17 N
ATOM 24 C4 G B2080 120.218 108.846 32.641 1.00 86.71 C
ATOM 25 P A B2081 119.642 104.697 28.385 1.00 92.54 P
ATOM 26 OP1 A B2081 119.576 104.074 27.038 1.00 93.27 O
ATOM 27 OP2 A B2081 119.440 103.856 29.591 1.00 91.54 O
ATOM 28 O5' A B2081 121.054 105.426 28.532 1.00 94.81 O
TER
ATOM 2 P C A2089 124.610 116.964 28.870 1.00 89.59 P
ATOM 3 OP1 C A2089 125.589 117.484 27.889 1.00 89.73 O
ATOM 4 OP2 C A2089 124.204 117.820 30.019 1.00 89.90 O
ATOM 5 O5' C A2089 123.304 116.506 28.075 1.00 88.93 O
ATOM 6 C5' C A2089 122.265 117.432 27.699 1.00 85.95 C
ATOM 7 C4' C A2089 120.924 116.941 28.209 1.00 84.13 C
ATOM 8 O4' C A2089 120.744 115.542 27.834 1.00 83.35 O
ATOM 9 C3' C A2089 120.745 116.976 29.726 1.00 82.81 C
ATOM 10 O3' C A2089 119.358 117.117 30.003 1.00 81.83 O
ATOM 11 C2' C A2089 121.139 115.565 30.130 1.00 82.14 C
ATOM 12 O2' C A2089 120.591 115.198 31.370 1.00 82.13 O
ATOM 13 C1' C A2089 120.492 114.779 28.998 1.00 83.08 C
ATOM 14 N1 C A2089 120.968 113.402 28.799 1.00 84.42 N
ATOM 15 C2 C A2089 120.062 112.340 28.990 1.00 85.61 C
ATOM 16 O2 C A2089 118.886 112.591 29.319 1.00 84.42 O
ATOM 17 N3 C A2089 120.490 111.068 28.810 1.00 86.37 N
ATOM 18 C4 C A2089 121.756 110.833 28.457 1.00 86.42 C
ATOM 19 N4 C A2089 122.136 109.562 28.299 1.00 86.63 N
ATOM 20 C5 C A2089 122.692 111.891 28.253 1.00 86.32 C
ATOM 21 C6 C A2089 122.260 113.147 28.434 1.00 85.54 C
ATOM 22 P A A2090 118.812 118.445 30.704 1.00 81.74 P
ATOM 23 OP1 A A2090 118.847 119.529 29.687 1.00 81.26 O
ATOM 24 OP2 A A2090 119.534 118.604 31.994 1.00 79.30 O
ATOM 25 O5' A A2090 117.276 118.130 30.977 1.00 80.95 O
TER
ATOM 1 O3' U B2079 113.657 106.045 32.385 1.00 75.48 O
ATOM 2 P G B2080 114.012 105.388 30.956 1.00 78.70 P
ATOM 3 OP1 G B2080 113.011 105.854 29.955 1.00 76.87 O
ATOM 4 OP2 G B2080 114.184 103.926 31.200 1.00 77.11 O
ATOM 5 O5' G B2080 115.446 106.010 30.607 1.00 81.20 O
ATOM 6 C5' G B2080 115.631 106.860 29.455 1.00 84.64 C
ATOM 7 C4' G B2080 117.016 107.496 29.443 1.00 87.39 C
ATOM 8 O4' G B2080 117.206 108.378 30.584 1.00 86.85 O
ATOM 9 C3' G B2080 118.266 106.629 29.536 1.00 89.00 C
ATOM 10 O3' G B2080 118.559 105.895 28.347 1.00 91.75 O
ATOM 11 C2' G B2080 119.324 107.706 29.757 1.00 88.54 C
ATOM 12 O2' G B2080 119.634 108.412 28.569 1.00 89.34 O
ATOM 13 C1' G B2080 118.597 108.652 30.718 1.00 87.59 C
ATOM 14 N9 G B2080 119.032 108.413 32.093 1.00 87.04 N
ATOM 15 C8 G B2080 118.391 107.698 33.077 1.00 86.97 C
ATOM 16 N7 G B2080 119.081 107.619 34.184 1.00 86.59 N
ATOM 17 C5 G B2080 120.241 108.334 33.920 1.00 86.40 C
ATOM 18 C6 G B2080 121.379 108.588 34.739 1.00 87.08 C
ATOM 19 O6 G B2080 121.596 108.218 35.903 1.00 86.18 O
ATOM 20 N1 G B2080 122.327 109.359 34.072 1.00 87.65 N
ATOM 21 C2 G B2080 122.202 109.825 32.785 1.00 87.89 C
ATOM 22 N2 G B2080 123.226 110.553 32.314 1.00 87.69 N
ATOM 23 N3 G B2080 121.152 109.595 32.015 1.00 87.17 N
ATOM 24 C4 G B2080 120.218 108.846 32.641 1.00 86.71 C
ATOM 25 P A B2081 119.642 104.697 28.385 1.00 92.54 P
ATOM 26 OP1 A B2081 119.576 104.074 27.038 1.00 93.27 O
ATOM 27 OP2 A B2081 119.440 103.856 29.591 1.00 91.54 O
ATOM 28 O5' A B2081 121.054 105.426 28.532 1.00 94.81 O
TER
Atoms:
C2: (120.062,112.340,28.990)
OP1: (125.589,117.484,27.889)
OP2: (124.204,117.820,30.019)
C4: (121.756,110.833,28.457)
O5': (123.304,116.506,28.075)
C3': (120.745,116.976,29.726)
C1': (120.492,114.779,28.998)
O4': (120.744,115.542,27.834)
C5': (122.265,117.432,27.699)
P: (124.610,116.964,28.870)
O2: (118.886,112.591,29.319)
C4': (120.924,116.941,28.209)
C2': (121.139,115.565,30.130)
O2': (120.591,115.198,31.370)
N1: (120.968,113.402,28.799)
N3: (120.490,111.068,28.810)
N4: (122.136,109.562,28.299)
C6: (122.260,113.147,28.434)
C5: (122.692,111.891,28.253)
O3': (119.358,117.117,30.003)
OP1: (125.589,117.484,27.889)
OP2: (124.204,117.820,30.019)
C4: (121.756,110.833,28.457)
O5': (123.304,116.506,28.075)
C3': (120.745,116.976,29.726)
C1': (120.492,114.779,28.998)
O4': (120.744,115.542,27.834)
C5': (122.265,117.432,27.699)
P: (124.610,116.964,28.870)
O2: (118.886,112.591,29.319)
C4': (120.924,116.941,28.209)
C2': (121.139,115.565,30.130)
O2': (120.591,115.198,31.370)
N1: (120.968,113.402,28.799)
N3: (120.490,111.068,28.810)
N4: (122.136,109.562,28.299)
C6: (122.260,113.147,28.434)
C5: (122.692,111.891,28.253)
O3': (119.358,117.117,30.003)
OP1: (113.011,105.854,29.955)
OP2: (114.184,103.926,31.200)
C3': (118.266,106.629,29.536)
C1': (118.597,108.652,30.718)
C5': (115.631,106.860,29.455)
O6: (121.596,108.218,35.903)
O4': (117.206,108.378,30.584)
C8: (118.391,107.698,33.077)
C2: (122.202,109.825,32.785)
C6: (121.379,108.588,34.739)
C5: (120.241,108.334,33.920)
C4: (120.218,108.846,32.641)
P: (114.012,105.388,30.956)
C4': (117.016,107.496,29.443)
C2': (119.324,107.706,29.757)
O2': (119.634,108.412,28.569)
N1: (122.327,109.359,34.072)
N2: (123.226,110.553,32.314)
N3: (121.152,109.595,32.015)
N7: (119.081,107.619,34.184)
N9: (119.032,108.413,32.093)
O5': (115.446,106.010,30.607)
O3': (118.559,105.895,28.347)
OP2: (114.184,103.926,31.200)
C3': (118.266,106.629,29.536)
C1': (118.597,108.652,30.718)
C5': (115.631,106.860,29.455)
O6: (121.596,108.218,35.903)
O4': (117.206,108.378,30.584)
C8: (118.391,107.698,33.077)
C2: (122.202,109.825,32.785)
C6: (121.379,108.588,34.739)
C5: (120.241,108.334,33.920)
C4: (120.218,108.846,32.641)
P: (114.012,105.388,30.956)
C4': (117.016,107.496,29.443)
C2': (119.324,107.706,29.757)
O2': (119.634,108.412,28.569)
N1: (122.327,109.359,34.072)
N2: (123.226,110.553,32.314)
N3: (121.152,109.595,32.015)
N7: (119.081,107.619,34.184)
N9: (119.032,108.413,32.093)
O5': (115.446,106.010,30.607)
O3': (118.559,105.895,28.347)
Image (generated by PyMOL):