Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02089:02080
Extra
PDB:
ATOM 1 O3' U A2088 124.869 115.285 28.972 1.00 72.43 O
ATOM 2 P C A2089 124.294 116.701 28.479 1.00 71.93 P
ATOM 3 OP1 C A2089 125.138 117.184 27.367 1.00 73.75 O
ATOM 4 OP2 C A2089 124.075 117.576 29.655 1.00 72.36 O
ATOM 5 O5' C A2089 122.888 116.274 27.863 1.00 72.30 O
ATOM 6 C5' C A2089 121.868 117.235 27.540 1.00 70.52 C
ATOM 7 C4' C A2089 120.535 116.757 28.071 1.00 69.40 C
ATOM 8 O4' C A2089 120.326 115.379 27.641 1.00 67.89 O
ATOM 9 C3' C A2089 120.426 116.728 29.596 1.00 68.40 C
ATOM 10 O3' C A2089 119.066 116.876 29.968 1.00 67.77 O
ATOM 11 C2' C A2089 120.818 115.297 29.918 1.00 67.73 C
ATOM 12 O2' C A2089 120.324 114.864 31.160 1.00 67.28 O
ATOM 13 C1' C A2089 120.124 114.565 28.777 1.00 68.99 C
ATOM 14 N1 C A2089 120.629 113.213 28.509 1.00 70.78 N
ATOM 15 C2 C A2089 119.762 112.116 28.688 1.00 72.57 C
ATOM 16 O2 C A2089 118.581 112.318 29.037 1.00 72.06 O
ATOM 17 N3 C A2089 120.232 110.868 28.474 1.00 73.38 N
ATOM 18 C4 C A2089 121.500 110.689 28.094 1.00 73.53 C
ATOM 19 N4 C A2089 121.926 109.440 27.911 1.00 74.08 N
ATOM 20 C5 C A2089 122.390 111.783 27.888 1.00 73.61 C
ATOM 21 C6 C A2089 121.918 113.014 28.104 1.00 72.15 C
ATOM 22 P A A2090 118.465 118.330 30.247 1.00 68.55 P
ATOM 23 OP1 A A2090 118.576 119.103 28.982 1.00 67.75 O
ATOM 24 OP2 A A2090 119.085 118.854 31.494 1.00 68.26 O
ATOM 25 O5' A A2090 116.919 118.041 30.513 1.00 67.67 O
TER
ATOM 1 O3' U B2079 113.168 105.869 31.953 1.00 67.40 O
ATOM 2 P G B2080 113.575 105.271 30.519 1.00 69.51 P
ATOM 3 OP1 G B2080 112.592 105.786 29.524 1.00 68.04 O
ATOM 4 OP2 G B2080 113.756 103.800 30.680 1.00 69.61 O
ATOM 5 O5' G B2080 115.006 105.930 30.238 1.00 72.37 O
ATOM 6 C5' G B2080 115.228 106.739 29.066 1.00 75.55 C
ATOM 7 C4' G B2080 116.607 107.375 29.079 1.00 77.20 C
ATOM 8 O4' G B2080 116.763 108.253 30.222 1.00 77.25 O
ATOM 9 C3' G B2080 117.845 106.502 29.195 1.00 78.91 C
ATOM 10 O3' G B2080 118.141 105.799 27.987 1.00 81.97 O
ATOM 11 C2' G B2080 118.901 107.566 29.476 1.00 78.78 C
ATOM 12 O2' G B2080 119.240 108.318 28.327 1.00 79.71 O
ATOM 13 C1' G B2080 118.148 108.493 30.431 1.00 77.90 C
ATOM 14 N9 G B2080 118.497 108.188 31.815 1.00 78.30 N
ATOM 15 C8 G B2080 117.759 107.491 32.742 1.00 79.07 C
ATOM 16 N7 G B2080 118.384 107.329 33.876 1.00 79.18 N
ATOM 17 C5 G B2080 119.602 107.969 33.692 1.00 78.46 C
ATOM 18 C6 G B2080 120.708 108.115 34.570 1.00 78.84 C
ATOM 19 O6 G B2080 120.838 107.689 35.725 1.00 79.30 O
ATOM 20 N1 G B2080 121.737 108.840 33.979 1.00 78.81 N
ATOM 21 C2 G B2080 121.709 109.356 32.707 1.00 78.57 C
ATOM 22 N2 G B2080 122.798 110.029 32.317 1.00 77.81 N
ATOM 23 N3 G B2080 120.688 109.223 31.878 1.00 78.06 N
ATOM 24 C4 G B2080 119.678 108.521 32.432 1.00 78.08 C
ATOM 25 P A B2081 119.105 104.508 28.022 1.00 82.17 P
ATOM 26 OP1 A B2081 118.837 103.758 26.768 1.00 82.86 O
ATOM 27 OP2 A B2081 118.960 103.823 29.325 1.00 81.95 O
ATOM 28 O5' A B2081 120.579 105.111 27.955 1.00 83.50 O
TER
ATOM 2 P C A2089 124.294 116.701 28.479 1.00 71.93 P
ATOM 3 OP1 C A2089 125.138 117.184 27.367 1.00 73.75 O
ATOM 4 OP2 C A2089 124.075 117.576 29.655 1.00 72.36 O
ATOM 5 O5' C A2089 122.888 116.274 27.863 1.00 72.30 O
ATOM 6 C5' C A2089 121.868 117.235 27.540 1.00 70.52 C
ATOM 7 C4' C A2089 120.535 116.757 28.071 1.00 69.40 C
ATOM 8 O4' C A2089 120.326 115.379 27.641 1.00 67.89 O
ATOM 9 C3' C A2089 120.426 116.728 29.596 1.00 68.40 C
ATOM 10 O3' C A2089 119.066 116.876 29.968 1.00 67.77 O
ATOM 11 C2' C A2089 120.818 115.297 29.918 1.00 67.73 C
ATOM 12 O2' C A2089 120.324 114.864 31.160 1.00 67.28 O
ATOM 13 C1' C A2089 120.124 114.565 28.777 1.00 68.99 C
ATOM 14 N1 C A2089 120.629 113.213 28.509 1.00 70.78 N
ATOM 15 C2 C A2089 119.762 112.116 28.688 1.00 72.57 C
ATOM 16 O2 C A2089 118.581 112.318 29.037 1.00 72.06 O
ATOM 17 N3 C A2089 120.232 110.868 28.474 1.00 73.38 N
ATOM 18 C4 C A2089 121.500 110.689 28.094 1.00 73.53 C
ATOM 19 N4 C A2089 121.926 109.440 27.911 1.00 74.08 N
ATOM 20 C5 C A2089 122.390 111.783 27.888 1.00 73.61 C
ATOM 21 C6 C A2089 121.918 113.014 28.104 1.00 72.15 C
ATOM 22 P A A2090 118.465 118.330 30.247 1.00 68.55 P
ATOM 23 OP1 A A2090 118.576 119.103 28.982 1.00 67.75 O
ATOM 24 OP2 A A2090 119.085 118.854 31.494 1.00 68.26 O
ATOM 25 O5' A A2090 116.919 118.041 30.513 1.00 67.67 O
TER
ATOM 1 O3' U B2079 113.168 105.869 31.953 1.00 67.40 O
ATOM 2 P G B2080 113.575 105.271 30.519 1.00 69.51 P
ATOM 3 OP1 G B2080 112.592 105.786 29.524 1.00 68.04 O
ATOM 4 OP2 G B2080 113.756 103.800 30.680 1.00 69.61 O
ATOM 5 O5' G B2080 115.006 105.930 30.238 1.00 72.37 O
ATOM 6 C5' G B2080 115.228 106.739 29.066 1.00 75.55 C
ATOM 7 C4' G B2080 116.607 107.375 29.079 1.00 77.20 C
ATOM 8 O4' G B2080 116.763 108.253 30.222 1.00 77.25 O
ATOM 9 C3' G B2080 117.845 106.502 29.195 1.00 78.91 C
ATOM 10 O3' G B2080 118.141 105.799 27.987 1.00 81.97 O
ATOM 11 C2' G B2080 118.901 107.566 29.476 1.00 78.78 C
ATOM 12 O2' G B2080 119.240 108.318 28.327 1.00 79.71 O
ATOM 13 C1' G B2080 118.148 108.493 30.431 1.00 77.90 C
ATOM 14 N9 G B2080 118.497 108.188 31.815 1.00 78.30 N
ATOM 15 C8 G B2080 117.759 107.491 32.742 1.00 79.07 C
ATOM 16 N7 G B2080 118.384 107.329 33.876 1.00 79.18 N
ATOM 17 C5 G B2080 119.602 107.969 33.692 1.00 78.46 C
ATOM 18 C6 G B2080 120.708 108.115 34.570 1.00 78.84 C
ATOM 19 O6 G B2080 120.838 107.689 35.725 1.00 79.30 O
ATOM 20 N1 G B2080 121.737 108.840 33.979 1.00 78.81 N
ATOM 21 C2 G B2080 121.709 109.356 32.707 1.00 78.57 C
ATOM 22 N2 G B2080 122.798 110.029 32.317 1.00 77.81 N
ATOM 23 N3 G B2080 120.688 109.223 31.878 1.00 78.06 N
ATOM 24 C4 G B2080 119.678 108.521 32.432 1.00 78.08 C
ATOM 25 P A B2081 119.105 104.508 28.022 1.00 82.17 P
ATOM 26 OP1 A B2081 118.837 103.758 26.768 1.00 82.86 O
ATOM 27 OP2 A B2081 118.960 103.823 29.325 1.00 81.95 O
ATOM 28 O5' A B2081 120.579 105.111 27.955 1.00 83.50 O
TER
Atoms:
C2: (119.762,112.116,28.688)
OP1: (125.138,117.184,27.367)
OP2: (124.075,117.576,29.655)
C4: (121.500,110.689,28.094)
O5': (122.888,116.274,27.863)
C3': (120.426,116.728,29.596)
C1': (120.124,114.565,28.777)
O4': (120.326,115.379,27.641)
C5': (121.868,117.235,27.540)
P: (124.294,116.701,28.479)
O2: (118.581,112.318,29.037)
C4': (120.535,116.757,28.071)
C2': (120.818,115.297,29.918)
O2': (120.324,114.864,31.160)
N1: (120.629,113.213,28.509)
N3: (120.232,110.868,28.474)
N4: (121.926,109.440,27.911)
C6: (121.918,113.014,28.104)
C5: (122.390,111.783,27.888)
O3': (119.066,116.876,29.968)
OP1: (125.138,117.184,27.367)
OP2: (124.075,117.576,29.655)
C4: (121.500,110.689,28.094)
O5': (122.888,116.274,27.863)
C3': (120.426,116.728,29.596)
C1': (120.124,114.565,28.777)
O4': (120.326,115.379,27.641)
C5': (121.868,117.235,27.540)
P: (124.294,116.701,28.479)
O2: (118.581,112.318,29.037)
C4': (120.535,116.757,28.071)
C2': (120.818,115.297,29.918)
O2': (120.324,114.864,31.160)
N1: (120.629,113.213,28.509)
N3: (120.232,110.868,28.474)
N4: (121.926,109.440,27.911)
C6: (121.918,113.014,28.104)
C5: (122.390,111.783,27.888)
O3': (119.066,116.876,29.968)
OP1: (112.592,105.786,29.524)
OP2: (113.756,103.800,30.680)
C3': (117.845,106.502,29.195)
C1': (118.148,108.493,30.431)
C5': (115.228,106.739,29.066)
O6: (120.838,107.689,35.725)
O4': (116.763,108.253,30.222)
C8: (117.759,107.491,32.742)
C2: (121.709,109.356,32.707)
C6: (120.708,108.115,34.570)
C5: (119.602,107.969,33.692)
C4: (119.678,108.521,32.432)
P: (113.575,105.271,30.519)
C4': (116.607,107.375,29.079)
C2': (118.901,107.566,29.476)
O2': (119.240,108.318,28.327)
N1: (121.737,108.840,33.979)
N2: (122.798,110.029,32.317)
N3: (120.688,109.223,31.878)
N7: (118.384,107.329,33.876)
N9: (118.497,108.188,31.815)
O5': (115.006,105.930,30.238)
O3': (118.141,105.799,27.987)
OP2: (113.756,103.800,30.680)
C3': (117.845,106.502,29.195)
C1': (118.148,108.493,30.431)
C5': (115.228,106.739,29.066)
O6: (120.838,107.689,35.725)
O4': (116.763,108.253,30.222)
C8: (117.759,107.491,32.742)
C2: (121.709,109.356,32.707)
C6: (120.708,108.115,34.570)
C5: (119.602,107.969,33.692)
C4: (119.678,108.521,32.432)
P: (113.575,105.271,30.519)
C4': (116.607,107.375,29.079)
C2': (118.901,107.566,29.476)
O2': (119.240,108.318,28.327)
N1: (121.737,108.840,33.979)
N2: (122.798,110.029,32.317)
N3: (120.688,109.223,31.878)
N7: (118.384,107.329,33.876)
N9: (118.497,108.188,31.815)
O5': (115.006,105.930,30.238)
O3': (118.141,105.799,27.987)
Image (generated by PyMOL):