ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHJ:A540:A2608

Extra

PDB:
ATOM 1 O3' A A 539 76.491-100.520 11.864 1.00 30.75 O
ATOM 2 P C A 540 77.547-101.610 12.339 1.00 24.38 P
ATOM 3 OP1 C A 540 77.915-102.417 11.154 1.00 48.63 O
ATOM 4 OP2 C A 540 76.970-102.301 13.512 1.00 49.24 O
ATOM 5 O5' C A 540 78.774-100.717 12.786 1.00 44.96 O
ATOM 6 C5' C A 540 79.408 -99.833 11.869 1.00 40.40 C
ATOM 7 C4' C A 540 80.881 -99.653 12.175 1.00 37.00 C
ATOM 8 O4' C A 540 81.045 -98.667 13.227 1.00 42.04 O
ATOM 9 C3' C A 540 81.621-100.901 12.655 1.00 39.97 C
ATOM 10 O3' C A 540 82.950-100.886 12.137 1.00 44.81 O
ATOM 11 C2' C A 540 81.689-100.675 14.160 1.00 45.30 C
ATOM 12 O2' C A 540 82.723-101.374 14.807 1.00 64.14 O
ATOM 13 C1' C A 540 81.927 -99.186 14.199 1.00 46.24 C
ATOM 14 N1 C A 540 81.668 -98.554 15.505 1.00 40.28 N
ATOM 15 C2 C A 540 80.396 -98.153 15.737 1.00 51.08 C
ATOM 16 O2 C A 540 79.606 -98.347 14.834 1.00 64.74 O
ATOM 17 N3 C A 540 80.017 -97.581 16.865 1.00 45.88 N
ATOM 18 C4 C A 540 80.924 -97.409 17.775 1.00 59.06 C
ATOM 19 N4 C A 540 80.465 -96.821 18.877 1.00 59.00 N
ATOM 20 C5 C A 540 82.290 -97.801 17.586 1.00 66.28 C
ATOM 21 C6 C A 540 82.623 -98.373 16.435 1.00 51.98 C
ATOM 22 P A A 541 83.292-101.535 10.719 1.00 38.17 P
ATOM 23 OP1 A A 541 82.531-102.811 10.627 1.00 66.47 O
ATOM 24 OP2 A A 541 84.758-101.571 10.585 1.00 60.74 O
ATOM 25 O5' A A 541 82.707-100.478 9.738 1.00 41.11 O
TER

ATOM 1 O3' A B2607 75.816 -97.628 25.729 1.00 39.94 O
ATOM 2 P G B2608 75.135 -97.407 24.310 1.00 36.66 P
ATOM 3 OP1 G B2608 73.876 -96.671 24.540 1.00 43.46 O
ATOM 4 OP2 G B2608 75.079 -98.718 23.656 1.00 43.09 O
ATOM 5 O5' G B2608 76.177 -96.476 23.549 1.00 42.04 O
ATOM 6 C5' G B2608 77.394 -97.002 23.034 1.00 35.62 C
ATOM 7 C4' G B2608 77.673 -96.479 21.651 1.00 30.49 C
ATOM 8 O4' G B2608 76.847 -97.186 20.703 1.00 33.49 O
ATOM 9 C3' G B2608 77.357 -95.014 21.442 1.00 30.25 C
ATOM 10 O3' G B2608 78.465 -94.182 21.733 1.00 29.33 O
ATOM 11 C2' G B2608 76.931 -94.941 19.991 1.00 26.04 C
ATOM 12 O2' G B2608 78.071 -94.879 19.172 1.00 41.07 O
ATOM 13 C1' G B2608 76.279 -96.299 19.782 1.00 32.71 C
ATOM 14 N9 G B2608 74.821 -96.287 20.004 1.00 29.66 N
ATOM 15 C8 G B2608 74.126 -95.583 20.932 1.00 33.44 C
ATOM 16 N7 G B2608 72.852 -95.841 20.914 1.00 29.30 N
ATOM 17 C5 G B2608 72.703 -96.779 19.920 1.00 26.17 C
ATOM 18 C6 G B2608 71.544 -97.430 19.447 1.00 34.72 C
ATOM 19 O6 G B2608 70.378 -97.301 19.823 1.00 35.81 O
ATOM 20 N1 G B2608 71.839 -98.323 18.438 1.00 33.66 N
ATOM 21 C2 G B2608 73.076 -98.541 17.950 1.00 27.09 C
ATOM 22 N2 G B2608 73.153 -99.423 16.975 1.00 28.44 N
ATOM 23 N3 G B2608 74.155 -97.947 18.376 1.00 30.18 N
ATOM 24 C4 G B2608 73.901 -97.079 19.360 1.00 27.27 C
ATOM 25 P A B2609 78.685 -93.574 23.212 1.00 28.95 P
ATOM 26 OP1 A B2609 77.401 -93.668 23.937 1.00 40.58 O
ATOM 27 OP2 A B2609 79.301 -92.255 23.050 1.00 27.56 O
ATOM 28 O5' A B2609 79.727 -94.568 23.845 1.00 35.01 O
TER

Atoms:
C2: (80.396,-98.153,15.737)
OP1: (77.915,-102.417,11.154)
OP2: (76.970,-102.301,13.512)
C4: (80.924,-97.409,17.775)
O5': (78.774,-100.717,12.786)
C3': (81.621,-100.901,12.655)
C1': (81.927,-99.186,14.199)
O4': (81.045,-98.667,13.227)
C5': (79.408,-99.833,11.869)
P: (77.547,-101.610,12.339)
O2: (79.606,-98.347,14.834)
C4': (80.881,-99.653,12.175)
C2': (81.689,-100.675,14.160)
O2': (82.723,-101.374,14.807)
N1: (81.668,-98.554,15.505)
N3: (80.017,-97.581,16.865)
N4: (80.465,-96.821,18.877)
C6: (82.623,-98.373,16.435)
C5: (82.290,-97.801,17.586)
O3': (82.950,-100.886,12.137)
OP1: (73.876,-96.671,24.540)
OP2: (75.079,-98.718,23.656)
C3': (77.357,-95.014,21.442)
C1': (76.279,-96.299,19.782)
C5': (77.394,-97.002,23.034)
O6: (70.378,-97.301,19.823)
O4': (76.847,-97.186,20.703)
C8: (74.126,-95.583,20.932)
C2: (73.076,-98.541,17.950)
C6: (71.544,-97.430,19.447)
C5: (72.703,-96.779,19.920)
C4: (73.901,-97.079,19.360)
P: (75.135,-97.407,24.310)
C4': (77.673,-96.479,21.651)
C2': (76.931,-94.941,19.991)
O2': (78.071,-94.879,19.172)
N1: (71.839,-98.323,18.438)
N2: (73.153,-99.423,16.975)
N3: (74.155,-97.947,18.376)
N7: (72.852,-95.841,20.914)
N9: (74.821,-96.287,20.004)
O5': (76.177,-96.476,23.549)
O3': (78.465,-94.182,21.733)
Image (generated by PyMOL):
PyMOL image
show in jmol