Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1398:A1387
Extra
PDB:
ATOM 1 O3' G A1397 60.130 167.435 68.045 1.00 45.12 O
ATOM 2 P C A1398 59.073 167.365 66.831 1.00 45.99 P
ATOM 3 OP1 C A1398 59.497 166.246 65.979 1.00 44.78 O
ATOM 4 OP2 C A1398 58.884 168.717 66.225 1.00 48.55 O
ATOM 5 O5' C A1398 57.718 166.937 67.537 1.00 44.65 O
ATOM 6 C5' C A1398 57.520 165.588 67.996 1.00 45.27 C
ATOM 7 C4' C A1398 56.101 165.404 68.451 1.00 46.32 C
ATOM 8 O4' C A1398 55.808 166.344 69.516 1.00 47.23 O
ATOM 9 C3' C A1398 55.078 165.706 67.384 1.00 47.65 C
ATOM 10 O3' C A1398 54.888 164.571 66.574 1.00 52.41 O
ATOM 11 C2' C A1398 53.856 166.120 68.191 1.00 46.96 C
ATOM 12 O2' C A1398 53.134 165.038 68.734 1.00 45.32 O
ATOM 13 C1' C A1398 54.512 166.894 69.334 1.00 46.23 C
ATOM 14 N1 C A1398 54.681 168.332 69.061 1.00 45.17 N
ATOM 15 C2 C A1398 53.571 169.185 69.095 1.00 43.92 C
ATOM 16 O2 C A1398 52.450 168.705 69.265 1.00 44.41 O
ATOM 17 N3 C A1398 53.763 170.513 68.929 1.00 43.31 N
ATOM 18 C4 C A1398 54.995 170.989 68.718 1.00 44.26 C
ATOM 19 N4 C A1398 55.155 172.301 68.614 1.00 44.47 N
ATOM 20 C5 C A1398 56.124 170.138 68.621 1.00 45.56 C
ATOM 21 C6 C A1398 55.927 168.833 68.799 1.00 45.97 C
ATOM 22 P U A1399 54.804 164.747 64.988 1.00 55.03 P
ATOM 23 OP1 U A1399 54.761 163.375 64.408 1.00 55.42 O
ATOM 24 OP2 U A1399 55.869 165.698 64.563 1.00 54.62 O
ATOM 25 O5' U A1399 53.389 165.442 64.802 1.00 55.36 O
TER
ATOM 1 O3' A B1386 43.492 163.209 72.376 1.00 54.81 O
ATOM 2 P C B1387 44.865 163.155 73.200 1.00 53.75 P
ATOM 3 OP1 C B1387 44.648 162.137 74.243 1.00 52.43 O
ATOM 4 OP2 C B1387 45.306 164.523 73.588 1.00 54.04 O
ATOM 5 O5' C B1387 45.902 162.557 72.160 1.00 50.61 O
ATOM 6 C5' C B1387 45.781 161.206 71.708 1.00 50.35 C
ATOM 7 C4' C B1387 47.032 160.805 71.000 1.00 50.12 C
ATOM 8 O4' C B1387 47.263 161.794 69.969 1.00 49.45 O
ATOM 9 C3' C B1387 48.301 160.859 71.832 1.00 50.84 C
ATOM 10 O3' C B1387 48.499 159.698 72.640 1.00 48.78 O
ATOM 11 C2' C B1387 49.364 161.025 70.756 1.00 51.58 C
ATOM 12 O2' C B1387 49.675 159.813 70.104 1.00 51.56 O
ATOM 13 C1' C B1387 48.652 161.967 69.781 1.00 49.25 C
ATOM 14 N1 C B1387 48.999 163.396 69.944 1.00 47.55 N
ATOM 15 C2 C B1387 50.179 163.844 69.370 1.00 47.98 C
ATOM 16 O2 C B1387 50.890 163.028 68.763 1.00 49.02 O
ATOM 17 N3 C B1387 50.527 165.149 69.484 1.00 47.44 N
ATOM 18 C4 C B1387 49.741 165.997 70.139 1.00 47.11 C
ATOM 19 N4 C B1387 50.136 167.265 70.208 1.00 46.46 N
ATOM 20 C5 C B1387 48.521 165.575 70.748 1.00 47.45 C
ATOM 21 C6 C B1387 48.194 164.271 70.630 1.00 47.89 C
ATOM 22 P U B1388 49.176 159.838 74.103 1.00 48.72 P
ATOM 23 OP1 U B1388 49.196 158.475 74.688 1.00 47.82 O
ATOM 24 OP2 U B1388 48.567 160.939 74.872 1.00 49.45 O
ATOM 25 O5' U B1388 50.660 160.329 73.812 1.00 46.01 O
TER
ATOM 2 P C A1398 59.073 167.365 66.831 1.00 45.99 P
ATOM 3 OP1 C A1398 59.497 166.246 65.979 1.00 44.78 O
ATOM 4 OP2 C A1398 58.884 168.717 66.225 1.00 48.55 O
ATOM 5 O5' C A1398 57.718 166.937 67.537 1.00 44.65 O
ATOM 6 C5' C A1398 57.520 165.588 67.996 1.00 45.27 C
ATOM 7 C4' C A1398 56.101 165.404 68.451 1.00 46.32 C
ATOM 8 O4' C A1398 55.808 166.344 69.516 1.00 47.23 O
ATOM 9 C3' C A1398 55.078 165.706 67.384 1.00 47.65 C
ATOM 10 O3' C A1398 54.888 164.571 66.574 1.00 52.41 O
ATOM 11 C2' C A1398 53.856 166.120 68.191 1.00 46.96 C
ATOM 12 O2' C A1398 53.134 165.038 68.734 1.00 45.32 O
ATOM 13 C1' C A1398 54.512 166.894 69.334 1.00 46.23 C
ATOM 14 N1 C A1398 54.681 168.332 69.061 1.00 45.17 N
ATOM 15 C2 C A1398 53.571 169.185 69.095 1.00 43.92 C
ATOM 16 O2 C A1398 52.450 168.705 69.265 1.00 44.41 O
ATOM 17 N3 C A1398 53.763 170.513 68.929 1.00 43.31 N
ATOM 18 C4 C A1398 54.995 170.989 68.718 1.00 44.26 C
ATOM 19 N4 C A1398 55.155 172.301 68.614 1.00 44.47 N
ATOM 20 C5 C A1398 56.124 170.138 68.621 1.00 45.56 C
ATOM 21 C6 C A1398 55.927 168.833 68.799 1.00 45.97 C
ATOM 22 P U A1399 54.804 164.747 64.988 1.00 55.03 P
ATOM 23 OP1 U A1399 54.761 163.375 64.408 1.00 55.42 O
ATOM 24 OP2 U A1399 55.869 165.698 64.563 1.00 54.62 O
ATOM 25 O5' U A1399 53.389 165.442 64.802 1.00 55.36 O
TER
ATOM 1 O3' A B1386 43.492 163.209 72.376 1.00 54.81 O
ATOM 2 P C B1387 44.865 163.155 73.200 1.00 53.75 P
ATOM 3 OP1 C B1387 44.648 162.137 74.243 1.00 52.43 O
ATOM 4 OP2 C B1387 45.306 164.523 73.588 1.00 54.04 O
ATOM 5 O5' C B1387 45.902 162.557 72.160 1.00 50.61 O
ATOM 6 C5' C B1387 45.781 161.206 71.708 1.00 50.35 C
ATOM 7 C4' C B1387 47.032 160.805 71.000 1.00 50.12 C
ATOM 8 O4' C B1387 47.263 161.794 69.969 1.00 49.45 O
ATOM 9 C3' C B1387 48.301 160.859 71.832 1.00 50.84 C
ATOM 10 O3' C B1387 48.499 159.698 72.640 1.00 48.78 O
ATOM 11 C2' C B1387 49.364 161.025 70.756 1.00 51.58 C
ATOM 12 O2' C B1387 49.675 159.813 70.104 1.00 51.56 O
ATOM 13 C1' C B1387 48.652 161.967 69.781 1.00 49.25 C
ATOM 14 N1 C B1387 48.999 163.396 69.944 1.00 47.55 N
ATOM 15 C2 C B1387 50.179 163.844 69.370 1.00 47.98 C
ATOM 16 O2 C B1387 50.890 163.028 68.763 1.00 49.02 O
ATOM 17 N3 C B1387 50.527 165.149 69.484 1.00 47.44 N
ATOM 18 C4 C B1387 49.741 165.997 70.139 1.00 47.11 C
ATOM 19 N4 C B1387 50.136 167.265 70.208 1.00 46.46 N
ATOM 20 C5 C B1387 48.521 165.575 70.748 1.00 47.45 C
ATOM 21 C6 C B1387 48.194 164.271 70.630 1.00 47.89 C
ATOM 22 P U B1388 49.176 159.838 74.103 1.00 48.72 P
ATOM 23 OP1 U B1388 49.196 158.475 74.688 1.00 47.82 O
ATOM 24 OP2 U B1388 48.567 160.939 74.872 1.00 49.45 O
ATOM 25 O5' U B1388 50.660 160.329 73.812 1.00 46.01 O
TER
Atoms:
C2: (53.571,169.185,69.095)
OP1: (59.497,166.246,65.979)
OP2: (58.884,168.717,66.225)
C4: (54.995,170.989,68.718)
O5': (57.718,166.937,67.537)
C3': (55.078,165.706,67.384)
C1': (54.512,166.894,69.334)
O4': (55.808,166.344,69.516)
C5': (57.520,165.588,67.996)
P: (59.073,167.365,66.831)
O2: (52.450,168.705,69.265)
C4': (56.101,165.404,68.451)
C2': (53.856,166.120,68.191)
O2': (53.134,165.038,68.734)
N1: (54.681,168.332,69.061)
N3: (53.763,170.513,68.929)
N4: (55.155,172.301,68.614)
C6: (55.927,168.833,68.799)
C5: (56.124,170.138,68.621)
O3': (54.888,164.571,66.574)
OP1: (59.497,166.246,65.979)
OP2: (58.884,168.717,66.225)
C4: (54.995,170.989,68.718)
O5': (57.718,166.937,67.537)
C3': (55.078,165.706,67.384)
C1': (54.512,166.894,69.334)
O4': (55.808,166.344,69.516)
C5': (57.520,165.588,67.996)
P: (59.073,167.365,66.831)
O2: (52.450,168.705,69.265)
C4': (56.101,165.404,68.451)
C2': (53.856,166.120,68.191)
O2': (53.134,165.038,68.734)
N1: (54.681,168.332,69.061)
N3: (53.763,170.513,68.929)
N4: (55.155,172.301,68.614)
C6: (55.927,168.833,68.799)
C5: (56.124,170.138,68.621)
O3': (54.888,164.571,66.574)
C2: (50.179,163.844,69.370)
OP1: (44.648,162.137,74.243)
OP2: (45.306,164.523,73.588)
C4: (49.741,165.997,70.139)
O5': (45.902,162.557,72.160)
C3': (48.301,160.859,71.832)
C1': (48.652,161.967,69.781)
O4': (47.263,161.794,69.969)
C5': (45.781,161.206,71.708)
P: (44.865,163.155,73.200)
O2: (50.890,163.028,68.763)
C4': (47.032,160.805,71.000)
C2': (49.364,161.025,70.756)
O2': (49.675,159.813,70.104)
N1: (48.999,163.396,69.944)
N3: (50.527,165.149,69.484)
N4: (50.136,167.265,70.208)
C6: (48.194,164.271,70.630)
C5: (48.521,165.575,70.748)
O3': (48.499,159.698,72.640)
OP1: (44.648,162.137,74.243)
OP2: (45.306,164.523,73.588)
C4: (49.741,165.997,70.139)
O5': (45.902,162.557,72.160)
C3': (48.301,160.859,71.832)
C1': (48.652,161.967,69.781)
O4': (47.263,161.794,69.969)
C5': (45.781,161.206,71.708)
P: (44.865,163.155,73.200)
O2: (50.890,163.028,68.763)
C4': (47.032,160.805,71.000)
C2': (49.364,161.025,70.756)
O2': (49.675,159.813,70.104)
N1: (48.999,163.396,69.944)
N3: (50.527,165.149,69.484)
N4: (50.136,167.265,70.208)
C6: (48.194,164.271,70.630)
C5: (48.521,165.575,70.748)
O3': (48.499,159.698,72.640)
Image (generated by PyMOL):