Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12085:12112
Extra
PDB:
ATOM 1 O3' C A2084 -16.452 5.792 77.567 1.00 42.69 O
ATOM 2 P C A2085 -16.672 6.301 76.043 1.00 48.89 P
ATOM 3 OP1 C A2085 -16.409 7.727 76.027 1.00 49.00 O
ATOM 4 OP2 C A2085 -17.978 5.808 75.583 1.00 49.18 O
ATOM 5 O5' C A2085 -15.532 5.555 75.250 1.00 48.48 O
ATOM 6 C5' C A2085 -14.258 6.107 75.086 1.00 48.21 C
ATOM 7 C4' C A2085 -13.385 5.109 74.415 1.00 47.86 C
ATOM 8 O4' C A2085 -13.841 3.780 74.774 1.00 47.84 O
ATOM 9 C3' C A2085 -13.394 5.134 72.904 1.00 47.84 C
ATOM 10 O3' C A2085 -12.425 6.036 72.423 1.00 47.69 O
ATOM 11 C2' C A2085 -13.066 3.690 72.550 1.00 47.60 C
ATOM 12 O2' C A2085 -11.674 3.503 72.589 1.00 47.23 O
ATOM 13 C1' C A2085 -13.681 2.898 73.709 1.00 47.69 C
ATOM 14 N1 C A2085 -15.028 2.278 73.374 1.00 47.98 N
ATOM 15 C2 C A2085 -14.976 1.206 72.522 1.00 47.86 C
ATOM 16 O2 C A2085 -13.880 0.976 72.230 1.00 47.56 O
ATOM 17 N3 C A2085 -15.974 0.473 72.049 1.00 48.06 N
ATOM 18 C4 C A2085 -17.144 0.817 72.496 1.00 48.41 C
ATOM 19 N4 C A2085 -18.075 0.044 72.007 1.00 48.60 N
ATOM 20 C5 C A2085 -17.396 1.896 73.420 1.00 48.58 C
ATOM 21 C6 C A2085 -16.310 2.606 73.839 1.00 48.35 C
ATOM 22 P A A2086 -12.626 6.952 71.096 1.00 42.83 P
ATOM 23 OP1 A A2086 -12.312 8.338 71.487 1.00 42.93 O
ATOM 24 OP2 A A2086 -13.958 6.657 70.482 1.00 43.14 O
ATOM 25 O5' A A2086 -11.481 6.419 70.158 1.00 42.48 O
TER
ATOM 1 O3' C B2111 -22.456 2.790 67.100 1.00 46.46 O
ATOM 2 P G B2112 -22.563 1.595 68.151 1.00 50.93 P
ATOM 3 OP1 G B2112 -23.862 0.908 67.889 1.00 51.27 O
ATOM 4 OP2 G B2112 -22.300 2.161 69.482 1.00 50.87 O
ATOM 5 O5' G B2112 -21.378 0.642 67.762 1.00 50.50 O
ATOM 6 C5' G B2112 -21.268 0.090 66.469 1.00 50.47 C
ATOM 7 C4' G B2112 -20.001 -0.687 66.368 1.00 50.05 C
ATOM 8 O4' G B2112 -18.890 0.237 66.534 1.00 49.79 O
ATOM 9 C3' G B2112 -19.823 -1.737 67.469 1.00 49.88 C
ATOM 10 O3' G B2112 -19.130 -2.868 66.948 1.00 49.63 O
ATOM 11 C2' G B2112 -18.939 -1.006 68.461 1.00 49.66 C
ATOM 12 O2' G B2112 -18.194 -1.819 69.319 1.00 49.37 O
ATOM 13 C1' G B2112 -18.048 -0.257 67.528 1.00 49.49 C
ATOM 14 N9 G B2112 -17.337 0.821 68.168 1.00 49.36 N
ATOM 15 C8 G B2112 -15.997 0.893 68.026 1.00 49.00 C
ATOM 16 N7 G B2112 -15.463 1.834 68.718 1.00 48.92 N
ATOM 17 C5 G B2112 -16.529 2.381 69.392 1.00 49.25 C
ATOM 18 C6 G B2112 -16.509 3.444 70.276 1.00 49.33 C
ATOM 19 O6 G B2112 -15.537 4.080 70.631 1.00 49.13 O
ATOM 20 N1 G B2112 -17.751 3.751 70.761 1.00 49.70 N
ATOM 21 C2 G B2112 -18.871 3.091 70.391 1.00 49.95 C
ATOM 22 N2 G B2112 -19.983 3.544 70.948 1.00 50.31 N
ATOM 23 N3 G B2112 -18.906 2.091 69.541 1.00 49.88 N
ATOM 24 C4 G B2112 -17.694 1.769 69.085 1.00 49.52 C
ATOM 25 P C B2113 -19.890 -4.253 66.744 1.00 66.19 P
ATOM 26 OP1 C B2113 -20.657 -4.130 65.509 1.00 66.47 O
ATOM 27 OP2 C B2113 -20.583 -4.555 68.002 1.00 66.34 O
ATOM 28 O5' C B2113 -18.722 -5.283 66.523 1.00 65.82 O
TER
ATOM 2 P C A2085 -16.672 6.301 76.043 1.00 48.89 P
ATOM 3 OP1 C A2085 -16.409 7.727 76.027 1.00 49.00 O
ATOM 4 OP2 C A2085 -17.978 5.808 75.583 1.00 49.18 O
ATOM 5 O5' C A2085 -15.532 5.555 75.250 1.00 48.48 O
ATOM 6 C5' C A2085 -14.258 6.107 75.086 1.00 48.21 C
ATOM 7 C4' C A2085 -13.385 5.109 74.415 1.00 47.86 C
ATOM 8 O4' C A2085 -13.841 3.780 74.774 1.00 47.84 O
ATOM 9 C3' C A2085 -13.394 5.134 72.904 1.00 47.84 C
ATOM 10 O3' C A2085 -12.425 6.036 72.423 1.00 47.69 O
ATOM 11 C2' C A2085 -13.066 3.690 72.550 1.00 47.60 C
ATOM 12 O2' C A2085 -11.674 3.503 72.589 1.00 47.23 O
ATOM 13 C1' C A2085 -13.681 2.898 73.709 1.00 47.69 C
ATOM 14 N1 C A2085 -15.028 2.278 73.374 1.00 47.98 N
ATOM 15 C2 C A2085 -14.976 1.206 72.522 1.00 47.86 C
ATOM 16 O2 C A2085 -13.880 0.976 72.230 1.00 47.56 O
ATOM 17 N3 C A2085 -15.974 0.473 72.049 1.00 48.06 N
ATOM 18 C4 C A2085 -17.144 0.817 72.496 1.00 48.41 C
ATOM 19 N4 C A2085 -18.075 0.044 72.007 1.00 48.60 N
ATOM 20 C5 C A2085 -17.396 1.896 73.420 1.00 48.58 C
ATOM 21 C6 C A2085 -16.310 2.606 73.839 1.00 48.35 C
ATOM 22 P A A2086 -12.626 6.952 71.096 1.00 42.83 P
ATOM 23 OP1 A A2086 -12.312 8.338 71.487 1.00 42.93 O
ATOM 24 OP2 A A2086 -13.958 6.657 70.482 1.00 43.14 O
ATOM 25 O5' A A2086 -11.481 6.419 70.158 1.00 42.48 O
TER
ATOM 1 O3' C B2111 -22.456 2.790 67.100 1.00 46.46 O
ATOM 2 P G B2112 -22.563 1.595 68.151 1.00 50.93 P
ATOM 3 OP1 G B2112 -23.862 0.908 67.889 1.00 51.27 O
ATOM 4 OP2 G B2112 -22.300 2.161 69.482 1.00 50.87 O
ATOM 5 O5' G B2112 -21.378 0.642 67.762 1.00 50.50 O
ATOM 6 C5' G B2112 -21.268 0.090 66.469 1.00 50.47 C
ATOM 7 C4' G B2112 -20.001 -0.687 66.368 1.00 50.05 C
ATOM 8 O4' G B2112 -18.890 0.237 66.534 1.00 49.79 O
ATOM 9 C3' G B2112 -19.823 -1.737 67.469 1.00 49.88 C
ATOM 10 O3' G B2112 -19.130 -2.868 66.948 1.00 49.63 O
ATOM 11 C2' G B2112 -18.939 -1.006 68.461 1.00 49.66 C
ATOM 12 O2' G B2112 -18.194 -1.819 69.319 1.00 49.37 O
ATOM 13 C1' G B2112 -18.048 -0.257 67.528 1.00 49.49 C
ATOM 14 N9 G B2112 -17.337 0.821 68.168 1.00 49.36 N
ATOM 15 C8 G B2112 -15.997 0.893 68.026 1.00 49.00 C
ATOM 16 N7 G B2112 -15.463 1.834 68.718 1.00 48.92 N
ATOM 17 C5 G B2112 -16.529 2.381 69.392 1.00 49.25 C
ATOM 18 C6 G B2112 -16.509 3.444 70.276 1.00 49.33 C
ATOM 19 O6 G B2112 -15.537 4.080 70.631 1.00 49.13 O
ATOM 20 N1 G B2112 -17.751 3.751 70.761 1.00 49.70 N
ATOM 21 C2 G B2112 -18.871 3.091 70.391 1.00 49.95 C
ATOM 22 N2 G B2112 -19.983 3.544 70.948 1.00 50.31 N
ATOM 23 N3 G B2112 -18.906 2.091 69.541 1.00 49.88 N
ATOM 24 C4 G B2112 -17.694 1.769 69.085 1.00 49.52 C
ATOM 25 P C B2113 -19.890 -4.253 66.744 1.00 66.19 P
ATOM 26 OP1 C B2113 -20.657 -4.130 65.509 1.00 66.47 O
ATOM 27 OP2 C B2113 -20.583 -4.555 68.002 1.00 66.34 O
ATOM 28 O5' C B2113 -18.722 -5.283 66.523 1.00 65.82 O
TER
Atoms:
C2: (-14.976,1.206,72.522)
OP1: (-16.409,7.727,76.027)
OP2: (-17.978,5.808,75.583)
C4: (-17.144,0.817,72.496)
O5': (-15.532,5.555,75.250)
C3': (-13.394,5.134,72.904)
C1': (-13.681,2.898,73.709)
O4': (-13.841,3.780,74.774)
C5': (-14.258,6.107,75.086)
P: (-16.672,6.301,76.043)
O2: (-13.880,0.976,72.230)
C4': (-13.385,5.109,74.415)
C2': (-13.066,3.690,72.550)
O2': (-11.674,3.503,72.589)
N1: (-15.028,2.278,73.374)
N3: (-15.974,0.473,72.049)
N4: (-18.075,0.044,72.007)
C6: (-16.310,2.606,73.839)
C5: (-17.396,1.896,73.420)
O3': (-12.425,6.036,72.423)
OP1: (-16.409,7.727,76.027)
OP2: (-17.978,5.808,75.583)
C4: (-17.144,0.817,72.496)
O5': (-15.532,5.555,75.250)
C3': (-13.394,5.134,72.904)
C1': (-13.681,2.898,73.709)
O4': (-13.841,3.780,74.774)
C5': (-14.258,6.107,75.086)
P: (-16.672,6.301,76.043)
O2: (-13.880,0.976,72.230)
C4': (-13.385,5.109,74.415)
C2': (-13.066,3.690,72.550)
O2': (-11.674,3.503,72.589)
N1: (-15.028,2.278,73.374)
N3: (-15.974,0.473,72.049)
N4: (-18.075,0.044,72.007)
C6: (-16.310,2.606,73.839)
C5: (-17.396,1.896,73.420)
O3': (-12.425,6.036,72.423)
OP1: (-23.862,0.908,67.889)
OP2: (-22.300,2.161,69.482)
C3': (-19.823,-1.737,67.469)
C1': (-18.048,-0.257,67.528)
C5': (-21.268,0.090,66.469)
O6: (-15.537,4.080,70.631)
O4': (-18.890,0.237,66.534)
C8: (-15.997,0.893,68.026)
C2: (-18.871,3.091,70.391)
C6: (-16.509,3.444,70.276)
C5: (-16.529,2.381,69.392)
C4: (-17.694,1.769,69.085)
P: (-22.563,1.595,68.151)
C4': (-20.001,-0.687,66.368)
C2': (-18.939,-1.006,68.461)
O2': (-18.194,-1.819,69.319)
N1: (-17.751,3.751,70.761)
N2: (-19.983,3.544,70.948)
N3: (-18.906,2.091,69.541)
N7: (-15.463,1.834,68.718)
N9: (-17.337,0.821,68.168)
O5': (-21.378,0.642,67.762)
O3': (-19.130,-2.868,66.948)
OP2: (-22.300,2.161,69.482)
C3': (-19.823,-1.737,67.469)
C1': (-18.048,-0.257,67.528)
C5': (-21.268,0.090,66.469)
O6: (-15.537,4.080,70.631)
O4': (-18.890,0.237,66.534)
C8: (-15.997,0.893,68.026)
C2: (-18.871,3.091,70.391)
C6: (-16.509,3.444,70.276)
C5: (-16.529,2.381,69.392)
C4: (-17.694,1.769,69.085)
P: (-22.563,1.595,68.151)
C4': (-20.001,-0.687,66.368)
C2': (-18.939,-1.006,68.461)
O2': (-18.194,-1.819,69.319)
N1: (-17.751,3.751,70.761)
N2: (-19.983,3.544,70.948)
N3: (-18.906,2.091,69.541)
N7: (-15.463,1.834,68.718)
N9: (-17.337,0.821,68.168)
O5': (-21.378,0.642,67.762)
O3': (-19.130,-2.868,66.948)
Image (generated by PyMOL):