Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12845:12805
Extra
PDB:
ATOM 1 O3' C A2844 10.759 46.290 51.131 1.00 53.97 O
ATOM 2 P C A2845 10.356 45.332 52.318 1.00 51.22 P
ATOM 3 OP1 C A2845 11.599 44.707 52.852 1.00 50.74 O
ATOM 4 OP2 C A2845 9.233 44.459 51.825 1.00 51.17 O
ATOM 5 O5' C A2845 9.792 46.400 53.336 1.00 51.61 O
ATOM 6 C5' C A2845 8.556 47.004 53.047 1.00 52.07 C
ATOM 7 C4' C A2845 8.606 48.492 53.088 1.00 52.60 C
ATOM 8 O4' C A2845 8.774 48.926 54.430 1.00 52.62 O
ATOM 9 C3' C A2845 9.669 49.198 52.264 1.00 52.73 C
ATOM 10 O3' C A2845 9.019 50.192 51.498 1.00 53.29 O
ATOM 11 C2' C A2845 10.521 49.899 53.325 1.00 52.75 C
ATOM 12 O2' C A2845 11.043 51.132 52.906 1.00 53.16 O
ATOM 13 C1' C A2845 9.514 50.088 54.434 1.00 52.92 C
ATOM 14 N1 C A2845 10.064 50.211 55.758 1.00 52.77 N
ATOM 15 C2 C A2845 9.940 51.422 56.410 1.00 53.22 C
ATOM 16 O2 C A2845 9.466 52.369 55.774 1.00 53.71 O
ATOM 17 N3 C A2845 10.407 51.520 57.679 1.00 53.10 N
ATOM 18 C4 C A2845 10.934 50.437 58.284 1.00 52.56 C
ATOM 19 N4 C A2845 11.397 50.558 59.532 1.00 52.48 N
ATOM 20 C5 C A2845 11.009 49.169 57.632 1.00 52.11 C
ATOM 21 C6 C A2845 10.549 49.103 56.381 1.00 52.23 C
ATOM 22 P A A2846 9.533 50.565 50.043 1.00 51.22 P
ATOM 23 OP1 A A2846 8.357 50.982 49.243 1.00 51.68 O
ATOM 24 OP2 A A2846 10.332 49.432 49.582 1.00 50.70 O
ATOM 25 O5' A A2846 10.447 51.821 50.320 1.00 51.50 O
TER
ATOM 1 O3' G B2804 8.730 55.810 60.926 1.00 55.10 O
ATOM 2 P G B2805 9.437 55.949 62.365 1.00 51.71 P
ATOM 3 OP1 G B2805 8.380 55.662 63.375 1.00 51.76 O
ATOM 4 OP2 G B2805 10.136 57.260 62.393 1.00 52.14 O
ATOM 5 O5' G B2805 10.517 54.769 62.376 1.00 51.03 O
ATOM 6 C5' G B2805 10.133 53.426 62.611 1.00 50.55 C
ATOM 7 C4' G B2805 11.326 52.540 62.707 1.00 49.99 C
ATOM 8 O4' G B2805 12.095 52.634 61.484 1.00 49.93 O
ATOM 9 C3' G B2805 12.321 52.898 63.782 1.00 49.96 C
ATOM 10 O3' G B2805 11.934 52.469 65.075 1.00 49.84 O
ATOM 11 C2' G B2805 13.617 52.277 63.263 1.00 49.51 C
ATOM 12 O2' G B2805 13.633 50.879 63.478 1.00 48.96 O
ATOM 13 C1' G B2805 13.479 52.522 61.771 1.00 49.66 C
ATOM 14 N9 G B2805 14.164 53.762 61.360 1.00 50.05 N
ATOM 15 C8 G B2805 13.661 55.034 61.240 1.00 50.65 C
ATOM 16 N7 G B2805 14.546 55.932 60.874 1.00 50.89 N
ATOM 17 C5 G B2805 15.718 55.200 60.741 1.00 50.42 C
ATOM 18 C6 G B2805 17.019 55.598 60.380 1.00 50.40 C
ATOM 19 O6 G B2805 17.470 56.698 60.054 1.00 50.80 O
ATOM 20 N1 G B2805 17.878 54.546 60.398 1.00 49.85 N
ATOM 21 C2 G B2805 17.598 53.262 60.686 1.00 49.36 C
ATOM 22 N2 G B2805 18.636 52.403 60.611 1.00 48.89 N
ATOM 23 N3 G B2805 16.389 52.866 61.043 1.00 49.37 N
ATOM 24 C4 G B2805 15.495 53.878 61.037 1.00 49.91 C
ATOM 25 P U B2806 12.353 53.341 66.375 1.00 52.62 P
ATOM 26 OP1 U B2806 11.670 52.747 67.540 1.00 52.50 O
ATOM 27 OP2 U B2806 12.110 54.752 66.067 1.00 53.23 O
ATOM 28 O5' U B2806 13.924 53.107 66.479 1.00 52.28 O
TER
ATOM 2 P C A2845 10.356 45.332 52.318 1.00 51.22 P
ATOM 3 OP1 C A2845 11.599 44.707 52.852 1.00 50.74 O
ATOM 4 OP2 C A2845 9.233 44.459 51.825 1.00 51.17 O
ATOM 5 O5' C A2845 9.792 46.400 53.336 1.00 51.61 O
ATOM 6 C5' C A2845 8.556 47.004 53.047 1.00 52.07 C
ATOM 7 C4' C A2845 8.606 48.492 53.088 1.00 52.60 C
ATOM 8 O4' C A2845 8.774 48.926 54.430 1.00 52.62 O
ATOM 9 C3' C A2845 9.669 49.198 52.264 1.00 52.73 C
ATOM 10 O3' C A2845 9.019 50.192 51.498 1.00 53.29 O
ATOM 11 C2' C A2845 10.521 49.899 53.325 1.00 52.75 C
ATOM 12 O2' C A2845 11.043 51.132 52.906 1.00 53.16 O
ATOM 13 C1' C A2845 9.514 50.088 54.434 1.00 52.92 C
ATOM 14 N1 C A2845 10.064 50.211 55.758 1.00 52.77 N
ATOM 15 C2 C A2845 9.940 51.422 56.410 1.00 53.22 C
ATOM 16 O2 C A2845 9.466 52.369 55.774 1.00 53.71 O
ATOM 17 N3 C A2845 10.407 51.520 57.679 1.00 53.10 N
ATOM 18 C4 C A2845 10.934 50.437 58.284 1.00 52.56 C
ATOM 19 N4 C A2845 11.397 50.558 59.532 1.00 52.48 N
ATOM 20 C5 C A2845 11.009 49.169 57.632 1.00 52.11 C
ATOM 21 C6 C A2845 10.549 49.103 56.381 1.00 52.23 C
ATOM 22 P A A2846 9.533 50.565 50.043 1.00 51.22 P
ATOM 23 OP1 A A2846 8.357 50.982 49.243 1.00 51.68 O
ATOM 24 OP2 A A2846 10.332 49.432 49.582 1.00 50.70 O
ATOM 25 O5' A A2846 10.447 51.821 50.320 1.00 51.50 O
TER
ATOM 1 O3' G B2804 8.730 55.810 60.926 1.00 55.10 O
ATOM 2 P G B2805 9.437 55.949 62.365 1.00 51.71 P
ATOM 3 OP1 G B2805 8.380 55.662 63.375 1.00 51.76 O
ATOM 4 OP2 G B2805 10.136 57.260 62.393 1.00 52.14 O
ATOM 5 O5' G B2805 10.517 54.769 62.376 1.00 51.03 O
ATOM 6 C5' G B2805 10.133 53.426 62.611 1.00 50.55 C
ATOM 7 C4' G B2805 11.326 52.540 62.707 1.00 49.99 C
ATOM 8 O4' G B2805 12.095 52.634 61.484 1.00 49.93 O
ATOM 9 C3' G B2805 12.321 52.898 63.782 1.00 49.96 C
ATOM 10 O3' G B2805 11.934 52.469 65.075 1.00 49.84 O
ATOM 11 C2' G B2805 13.617 52.277 63.263 1.00 49.51 C
ATOM 12 O2' G B2805 13.633 50.879 63.478 1.00 48.96 O
ATOM 13 C1' G B2805 13.479 52.522 61.771 1.00 49.66 C
ATOM 14 N9 G B2805 14.164 53.762 61.360 1.00 50.05 N
ATOM 15 C8 G B2805 13.661 55.034 61.240 1.00 50.65 C
ATOM 16 N7 G B2805 14.546 55.932 60.874 1.00 50.89 N
ATOM 17 C5 G B2805 15.718 55.200 60.741 1.00 50.42 C
ATOM 18 C6 G B2805 17.019 55.598 60.380 1.00 50.40 C
ATOM 19 O6 G B2805 17.470 56.698 60.054 1.00 50.80 O
ATOM 20 N1 G B2805 17.878 54.546 60.398 1.00 49.85 N
ATOM 21 C2 G B2805 17.598 53.262 60.686 1.00 49.36 C
ATOM 22 N2 G B2805 18.636 52.403 60.611 1.00 48.89 N
ATOM 23 N3 G B2805 16.389 52.866 61.043 1.00 49.37 N
ATOM 24 C4 G B2805 15.495 53.878 61.037 1.00 49.91 C
ATOM 25 P U B2806 12.353 53.341 66.375 1.00 52.62 P
ATOM 26 OP1 U B2806 11.670 52.747 67.540 1.00 52.50 O
ATOM 27 OP2 U B2806 12.110 54.752 66.067 1.00 53.23 O
ATOM 28 O5' U B2806 13.924 53.107 66.479 1.00 52.28 O
TER
Atoms:
C2: (9.940,51.422,56.410)
OP1: (11.599,44.707,52.852)
OP2: (9.233,44.459,51.825)
C4: (10.934,50.437,58.284)
O5': (9.792,46.400,53.336)
C3': (9.669,49.198,52.264)
C1': (9.514,50.088,54.434)
O4': (8.774,48.926,54.430)
C5': (8.556,47.004,53.047)
P: (10.356,45.332,52.318)
O2: (9.466,52.369,55.774)
C4': (8.606,48.492,53.088)
C2': (10.521,49.899,53.325)
O2': (11.043,51.132,52.906)
N1: (10.064,50.211,55.758)
N3: (10.407,51.520,57.679)
N4: (11.397,50.558,59.532)
C6: (10.549,49.103,56.381)
C5: (11.009,49.169,57.632)
O3': (9.019,50.192,51.498)
OP1: (11.599,44.707,52.852)
OP2: (9.233,44.459,51.825)
C4: (10.934,50.437,58.284)
O5': (9.792,46.400,53.336)
C3': (9.669,49.198,52.264)
C1': (9.514,50.088,54.434)
O4': (8.774,48.926,54.430)
C5': (8.556,47.004,53.047)
P: (10.356,45.332,52.318)
O2: (9.466,52.369,55.774)
C4': (8.606,48.492,53.088)
C2': (10.521,49.899,53.325)
O2': (11.043,51.132,52.906)
N1: (10.064,50.211,55.758)
N3: (10.407,51.520,57.679)
N4: (11.397,50.558,59.532)
C6: (10.549,49.103,56.381)
C5: (11.009,49.169,57.632)
O3': (9.019,50.192,51.498)
OP1: (8.380,55.662,63.375)
OP2: (10.136,57.260,62.393)
C3': (12.321,52.898,63.782)
C1': (13.479,52.522,61.771)
C5': (10.133,53.426,62.611)
O6: (17.470,56.698,60.054)
O4': (12.095,52.634,61.484)
C8: (13.661,55.034,61.240)
C2: (17.598,53.262,60.686)
C6: (17.019,55.598,60.380)
C5: (15.718,55.200,60.741)
C4: (15.495,53.878,61.037)
P: (9.437,55.949,62.365)
C4': (11.326,52.540,62.707)
C2': (13.617,52.277,63.263)
O2': (13.633,50.879,63.478)
N1: (17.878,54.546,60.398)
N2: (18.636,52.403,60.611)
N3: (16.389,52.866,61.043)
N7: (14.546,55.932,60.874)
N9: (14.164,53.762,61.360)
O5': (10.517,54.769,62.376)
O3': (11.934,52.469,65.075)
OP2: (10.136,57.260,62.393)
C3': (12.321,52.898,63.782)
C1': (13.479,52.522,61.771)
C5': (10.133,53.426,62.611)
O6: (17.470,56.698,60.054)
O4': (12.095,52.634,61.484)
C8: (13.661,55.034,61.240)
C2: (17.598,53.262,60.686)
C6: (17.019,55.598,60.380)
C5: (15.718,55.200,60.741)
C4: (15.495,53.878,61.037)
P: (9.437,55.949,62.365)
C4': (11.326,52.540,62.707)
C2': (13.617,52.277,63.263)
O2': (13.633,50.879,63.478)
N1: (17.878,54.546,60.398)
N2: (18.636,52.403,60.611)
N3: (16.389,52.866,61.043)
N7: (14.546,55.932,60.874)
N9: (14.164,53.762,61.360)
O5': (10.517,54.769,62.376)
O3': (11.934,52.469,65.075)
Image (generated by PyMOL):